Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0336351 Lupinus albus HOM05D003838 ORTHO05D004444 1.4e-110 402.9 199 100.0
Lalb_Chr10g0091981 Lupinus albus HOM05D003838 ORTHO05D004444 1.6e-93 346.3 199 84.9
arahy.Tifrunner.gnm1.ann1.536K79 Arachis hypogaea HOM05D003838 ORTHO05D004444 4.2e-78 295.0 199 68.3
arahy.Tifrunner.gnm1.ann1.0B6HPH Arachis hypogaea HOM05D003838 ORTHO05D004444 7.1e-78 294.3 199 68.3
Ca_14316_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 2.1e-77 292.7 199 71.4
Glyma.11G081600 Glycine max HOM05D003838 ORTHO05D004444 3.5e-77 292.0 198 70.7
VMungo1080G0233 Vigna mungo HOM05D003838 ORTHO05D004444 3.5e-77 292.0 199 71.4
TPR.G3853 Trifolium pratense HOM05D003838 ORTHO05D004444 8.7e-76 287.3 199 71.9
Psat5g216120 Pisum sativum HOM05D003838 ORTHO05D004444 1.9e-75 286.2 199 69.8
Medtr3g021420 Medicago truncatula HOM05D003838 ORTHO05D004444 4.3e-75 285.0 199 69.3
Medtr7g090650 Medicago truncatula HOM05D003838 ORTHO05D004444 7.4e-75 284.3 201 69.7
Phvul.005G032200 Phaseolus vulgaris HOM05D003838 ORTHO05D004444 2.1e-74 282.7 199 68.3
Medtr3g030930 Medicago truncatula HOM05D003838 ORTHO05D004444 3.7e-74 282.0 199 68.8
Lj3g0022900 Lotus japonicus HOM05D003838 ORTHO05D004444 1.1e-73 280.4 199 68.3
arahy.Tifrunner.gnm1.ann1.JCJT2N Arachis hypogaea HOM05D000735 ORTHO05D004669 1.9e-67 259.6 187 66.8
Cfa015168 Carpinus fangiana HOM05D003838 ORTHO05D004444 2.8e-66 255.8 201 61.2
Haze_01511 Corylus avellana HOM05D003838 ORTHO05D004444 4.1e-65 251.9 192 63.0
Sed0023259 Sechium edule HOM05D003838 ORTHO05D004444 7.7e-64 247.7 200 60.0
Duzib212G0889 Durio zibethinus HOM05D003838 ORTHO05D004444 3.8e-63 245.4 199 59.3
Thecc.04G179800 Theobroma cacao HOM05D003838 ORTHO05D004444 6.5e-63 244.6 199 58.8
Prupe.3G140200 Prunus persica HOM05D003838 ORTHO05D004444 1.1e-62 243.8 198 57.1
MD13G1208600 Malus domestica HOM05D003838 ORTHO05D004444 4.2e-62 241.9 199 54.8
CANSAT78G1384 Cannabis sativa HOM05D003838 ORTHO05D004444 7.2e-62 241.1 186 61.8
arahy.Tifrunner.gnm1.ann1.IZ4F9K Arachis hypogaea HOM05D003838 ORTHO05D004444 1.2e-61 240.4 199 60.8
Ciclev10022331m.g Citrus clementina HOM05D003838 ORTHO05D004444 2.7e-61 239.2 200 58.0
TAR376G0719 Trochodendron aralioides HOM05D003838 ORTHO05D004444 4.6e-61 238.4 200 57.5
GSVIVG01022417001 Vitis vinifera HOM05D003838 ORTHO05D004444 1.0e-60 237.3 193 56.0
Sabra17G0019500 Salix brachista HOM05D003838 ORTHO05D004444 1.8e-60 236.5 190 59.5
Gohir.A10G137200 Gossypium hirsutum HOM05D003838 ORTHO05D004444 3.0e-60 235.7 192 57.3
Gorai.011G142700 Gossypium raimondii HOM05D003838 ORTHO05D004444 3.0e-60 235.7 192 57.8
CsaV3_6G002030 Cucumis sativus L. HOM05D003838 ORTHO05D004444 2.0e-59 233.0 200 58.0
Potri.017G030000 Populus trichocarpa HOM05D003838 ORTHO05D004444 2.0e-59 233.0 190 58.9
Manes.03G131800 Manihot esculenta HOM05D003838 ORTHO05D004444 1.3e-58 230.3 199 56.8
Ca_25969_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 2.8e-58 229.2 165 66.7
MBI16_g18329_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 2.8e-58 229.2 197 53.8
CSS0031035 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 3.7e-58 228.8 193 56.0
PSO063G7239 Papaver somniferum HOM05D003838 ORTHO05D004444 3.7e-58 228.8 199 53.3
PSO782G5029 Papaver somniferum HOM05D003838 ORTHO05D004444 8.2e-58 227.6 199 53.3
TAR629G1244 Trochodendron aralioides HOM05D003838 ORTHO05D004444 1.4e-57 226.9 200 56.5
CSS0022226 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 1.8e-57 226.5 193 56.0
Hma1.2p1_0002F.1_g002170 Hydrangea macrophylla HOM05D003838 ORTHO05D004444 1.8e-57 226.5 195 54.9
PSO210G5426 Papaver somniferum HOM05D003838 ORTHO05D004444 3.1e-57 225.7 199 52.3
CSS0030021 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 4.1e-57 225.3 193 55.4
Prupe.1G032600 Prunus persica HOM05D003838 ORTHO05D004444 4.1e-57 225.3 199 53.3
ClCG08G004710 Citrullus lanatus HOM05D003838 ORTHO05D004444 6.9e-57 224.6 200 57.0
Nn1g08615 Nelumbo nucifera HOM05D003838 ORTHO05D004444 1.2e-56 223.8 200 53.5
AUR62008103 Chenopodium quinoa HOM05D003838 ORTHO05D004444 1.5e-56 223.4 200 53.5
QL03p038958 Quercus lobata HOM05D003838 ORTHO05D004444 1.5e-56 223.4 191 57.6
AUR62028681 Chenopodium quinoa HOM05D003838 ORTHO05D004444 2.0e-56 223.0 200 53.5
COL.COLO4_07664 Corchorus olitorius HOM05D003838 ORTHO05D004444 3.4e-56 222.2 194 55.7
FvH4_4g03700 Fragaria vesca HOM05D003838 ORTHO05D004444 5.9e-56 221.5 199 50.8
RcHm_v2.0_Chr4g0393311 Rosa chinensis HOM05D003838 ORTHO05D004444 5.9e-56 221.5 199 51.8
Lj9P420T34 Lonicera japonica HOM05D003838 ORTHO05D004444 7.7e-56 221.1 195 52.8
FAN17G3077 Fragaria x ananassa HOM05D003838 ORTHO05D004444 3.8e-55 218.8 199 50.8
Atru.chr3.1491 Acer truncatum HOM05D003838 ORTHO05D004444 5.0e-55 218.4 191 56.0
Manes.15G070000 Manihot esculenta HOM05D003838 ORTHO05D004444 5.0e-55 218.4 199 54.8
MSTRG.23130 Avicennia marina HOM05D003838 ORTHO05D004444 6.5e-55 218.0 195 52.3
MBI16_g18328_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 8.5e-55 217.6 197 51.8
PGR083G1767 Punica granatum HOM05D003838 ORTHO05D004444 8.5e-55 217.6 189 56.1
FAN12G0299 Fragaria x ananassa HOM05D000189 ORTHO05D000474 1.1e-54 217.2 189 52.4
Ah.11g050950 Amaranthus hybridus HOM05D003838 ORTHO05D004444 3.2e-54 215.7 199 51.3
Ca_24199_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 3.2e-54 215.7 167 64.7
Cc07_g02090 Coffea canephora HOM05D003838 ORTHO05D004444 3.2e-54 215.7 197 52.3
Migut.I00010 Erythranthe guttata HOM05D003838 ORTHO05D004444 3.2e-54 215.7 198 52.5
Sc20g0000750 Simmondsia chinensis HOM05D003838 ORTHO05D004444 4.2e-54 215.3 199 49.2
MELO3C008320.2 Cucumis melo HOM05D003838 ORTHO05D004444 9.4e-54 214.2 247 47.0
Ca_24671_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 1.2e-53 213.8 154 65.6
Cc06_g03220 Coffea canephora HOM05D003838 ORTHO05D004444 1.6e-53 213.4 197 52.8
Rhsim05G0049100 Rhododendron simsii HOM05D003838 ORTHO05D004444 4.7e-53 211.8 183 54.6
CDE06G0074 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 7.9e-53 211.1 194 52.1
PGSC0003DMG400029841 Solanum tuberosum HOM05D003838 ORTHO05D004444 7.9e-53 211.1 197 52.8
CSS0020761 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 1.8e-52 209.9 193 52.8
SGA_v2.0_scaffold25G10841 Striga asiatica HOM05D003838 ORTHO05D004444 2.3e-52 209.5 195 50.3
TWI38G0658 Tripterygium wilfordii HOM05D003838 ORTHO05D004444 2.3e-52 209.5 190 51.6
Actinidia26441 Actinidia chinensis HOM05D003838 ORTHO05D004444 3.0e-52 209.1 193 51.8
Solyc10g079580.2 Solanum lycopersicum HOM05D003838 ORTHO05D004444 3.0e-52 209.1 197 52.8
Rhsim09G0030300 Rhododendron simsii HOM05D003838 ORTHO05D004444 6.7e-52 208.0 183 52.5
Sopen10g030220 Solanum pennellii HOM05D003838 ORTHO05D004444 8.8e-52 207.6 197 52.3
SGA_v2.0_scaffold90G27933 Striga asiatica HOM05D003838 ORTHO05D004444 8.8e-52 207.6 195 49.2
vmacro23050 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 8.8e-52 207.6 190 50.5
EL10Ac5g10613 Beta vulgaris HOM05D003838 ORTHO05D004444 1.1e-51 207.2 200 50.0
vmacro01004 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 1.5e-51 206.8 187 51.3
QL10p048766 Quercus lobata HOM05D003838 ORTHO05D004444 2.6e-51 206.1 199 52.8
RcHm_v2.0_Chr4g0390961 Rosa chinensis HOM05D003838 ORTHO05D004444 3.3e-51 205.7 192 49.5
Eucgr.A00080 Eucalyptus grandis HOM05D003838 ORTHO05D004444 4.4e-51 205.3 199 51.3
Nitab4.5_0000515g0040 Nicotiana tabacum HOM05D003838 ORTHO05D004444 4.4e-51 205.3 197 50.8
Nitab4.5_0002162g0060 Nicotiana tabacum HOM05D003838 ORTHO05D004444 5.7e-51 204.9 197 53.8
Peaxi162Scf00201g00019 Petunia axillaris HOM05D003838 ORTHO05D004444 5.7e-51 204.9 195 50.3
RhsimUnG0118200 Rhododendron simsii HOM05D003838 ORTHO05D004444 5.7e-51 204.9 183 52.5
Hund02940 Selenicereus undatus HOM05D003838 ORTHO05D004444 5.7e-51 204.9 199 50.3
Nitab4.5_0002208g0080 Nicotiana tabacum HOM05D003838 ORTHO05D004444 1.3e-50 203.8 197 52.3
THA.LOC104826203 Tarenaya hassleriana HOM05D003838 ORTHO05D004444 1.3e-50 203.8 198 51.5
DCAR_006535 Daucus carota HOM05D003838 ORTHO05D004444 2.2e-50 203.0 193 49.2
SalBow5G3784 Salvia bowleyana HOM05D003838 ORTHO05D004444 2.8e-50 202.6 195 51.3
RcHm_v2.0_Chr4g0390901 Rosa chinensis HOM05D003838 ORTHO05D004444 3.7e-50 202.2 192 49.0
Aqoxy7G02681 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 4.8e-50 201.8 200 47.5
SalBow7G4199 Salvia bowleyana HOM05D003838 ORTHO05D004444 6.3e-50 201.4 192 52.1
Aqoxy7G02974 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.1e-49 200.7 199 48.2
CARHR005500 Cardamine hirsuta HOM05D003838 ORTHO05D004444 7.0e-49 198.0 193 48.7
BolC5t29205H Brassica oleracea HOM05D003838 ORTHO05D004444 9.1e-49 197.6 188 49.5
C05p04300 Brassica napus HOM05D003838 ORTHO05D004444 2.0e-48 196.4 188 48.9
Nn5g28129 Nelumbo nucifera HOM05D003838 ORTHO05D004444 4.5e-48 195.3 176 53.4
Peaxi162Scf00970g00146 Petunia axillaris HOM05D003838 ORTHO05D004444 4.5e-48 195.3 192 51.0
Sp1g04800 Schrenkiella parvula HOM05D003838 ORTHO05D004444 4.5e-48 195.3 187 47.6
Aa31LG1G8370 Aethionema arabicum HOM05D003838 ORTHO05D004444 5.9e-48 194.9 184 49.5
Hund09632 Selenicereus undatus HOM05D003838 ORTHO05D004444 5.9e-48 194.9 195 49.7
Thhalv10008811m.g Eutrema salsugineum HOM05D003838 ORTHO05D004444 1.7e-47 193.4 194 46.4
BraA10t42729Z Brassica rapa HOM05D003838 ORTHO05D004444 1.5e-46 190.3 188 48.4
AUR62024648 Chenopodium quinoa HOM05D004658 ORTHO05D005927 1.5e-46 190.3 200 47.5
A10p04640 Brassica napus HOM05D003838 ORTHO05D004444 1.9e-46 189.9 183 49.7
ECA246G3227 Erigeron canadensis HOM05D003838 ORTHO05D004444 2.5e-46 189.5 186 51.6
FAN12G3313 Fragaria x ananassa HOM05D003838 ORTHO05D004444 7.2e-46 188.0 191 48.2
HanXRQChr01g0021151 Helianthus annuus HOM05D003838 ORTHO05D004444 7.2e-46 188.0 193 48.2
HanXRQChr16g0504861 Helianthus annuus HOM05D003838 ORTHO05D004444 7.2e-46 188.0 193 48.2
AL1G15920 Arabidopsis lyrata HOM05D003838 ORTHO05D004444 9.4e-46 187.6 193 47.2
Carub.0001s0533 Capsella rubella HOM05D003838 ORTHO05D004444 9.4e-46 187.6 188 47.9
Aqoxy285s002 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.2e-45 187.2 179 49.2
CDE02G1933 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.6e-45 186.8 193 45.1
CiPaw.01G100400 Carya illinoinensis HOM05D003838 ORTHO05D004444 2.7e-45 186.0 147 57.8
HanXRQChr10g0305171 Helianthus annuus HOM05D003838 ORTHO05D004444 2.7e-45 186.0 193 47.2
FvH4_4g02890 Fragaria vesca HOM05D003838 ORTHO05D004444 4.7e-45 185.3 191 47.6
AT1G05970 Arabidopsis thaliana HOM05D003838 ORTHO05D004444 6.1e-45 184.9 193 46.1
HanXRQChr16g0516761 Helianthus annuus HOM05D003838 ORTHO05D004444 6.1e-45 184.9 191 47.6
AUR62011801 Chenopodium quinoa HOM05D003838 ORTHO05D004444 8.0e-45 184.5 201 47.3
PGSC0003DMG400002948 Solanum tuberosum HOM05D003838 ORTHO05D004444 8.0e-45 184.5 188 47.9
Gohir.D10G129400 Gossypium hirsutum HOM05D003838 ORTHO05D004444 1.0e-44 184.1 143 60.1
HanXRQChr02g0057691 Helianthus annuus HOM05D003838 ORTHO05D004444 1.0e-44 184.1 193 46.1
RcHm_v2.0_Chr4g0390871 Rosa chinensis HOM05D003838 ORTHO05D004444 4.0e-44 182.2 179 47.5
Nitab4.5_0024579g0010 Nicotiana tabacum HOM05D003838 ORTHO05D004444 5.2e-44 181.8 197 46.7
ECA238G0498 Erigeron canadensis HOM05D003838 ORTHO05D004444 6.7e-44 181.4 191 50.3
HanXRQChr14g0439271 Helianthus annuus HOM05D003838 ORTHO05D004444 6.7e-44 181.4 193 46.6
Lj5P157T23 Lonicera japonica HOM05D003838 ORTHO05D004444 1.2e-43 180.6 144 56.9
Lsat_1_v5_gn_2_85780 Lactuca sativa HOM05D003838 ORTHO05D004444 1.5e-43 180.3 174 51.1
HanXRQChr16g0517051 Helianthus annuus HOM05D003838 ORTHO05D004444 2.0e-43 179.9 194 47.4
Oeu016385.1 Olea europaea HOM05D003838 ORTHO05D004444 2.6e-43 179.5 174 46.6
HanXRQChr12g0355781 Helianthus annuus HOM05D003838 ORTHO05D004444 3.3e-43 179.1 193 47.2
HanXRQChr02g0057701 Helianthus annuus HOM05D003838 ORTHO05D004444 5.7e-43 178.3 191 48.2
CARHR038440 Cardamine hirsuta HOM05D003838 ORTHO05D004444 7.5e-43 177.9 170 50.6
SEGI_03408 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 2.2e-42 176.4 182 47.8
ATR0665G504 Amborella trichopoda HOM05D003838 ORTHO05D004444 1.1e-41 174.1 198 46.5
unitig_750.g28470 Utricularia gibba HOM05D003838 ORTHO05D004444 1.4e-41 173.7 176 48.3
BcaC05g24315 Brassica carinata HOM05D003838 ORTHO05D004444 4.1e-41 172.2 188 45.7
Sopen04g016270 Solanum pennellii HOM05D003838 ORTHO05D004444 6.5e-39 164.9 164 49.4
Migut.L01638 Erythranthe guttata HOM05D003838 ORTHO05D004444 2.5e-38 162.9 190 43.7
Zm00001eb304590 Zea mays HOM05D003838 ORTHO05D004444 1.2e-37 160.6 190 39.5
EL10As5g23534 Beta vulgaris HOM05D003838 ORTHO05D004444 1.8e-36 156.8 197 41.6
PSO832G2359 Papaver somniferum HOM05D003838 ORTHO05D004444 3.0e-36 156.0 199 40.2
SEGI_13821 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 3.0e-36 156.0 188 42.6
Os07g0256200 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 4.0e-36 155.6 177 41.8
Cpa.g.sc71.4 Carica papaya HOM05D003838 ORTHO05D004444 1.5e-35 153.7 125 58.4
Os09g0111800 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 1.5e-35 153.7 192 42.7
Sp1g04950 Schrenkiella parvula HOM05D003838 ORTHO05D004444 1.5e-35 153.7 191 40.3
CDE08G0678 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 3.7e-34 149.1 125 56.0
Os04g0689700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 3.1e-33 146.0 192 39.6
vmacro04174 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 2.9e-31 139.4 159 45.3
HPP92_001929 Vanilla planifolia HOM05D003838 ORTHO05D004444 6.5e-31 138.3 194 40.2
Zm00001eb076930 Zea mays HOM05D003838 ORTHO05D004444 7.2e-30 134.8 191 38.2
Zm00001eb076310 Zea mays HOM05D003838 ORTHO05D004444 1.6e-29 133.7 191 38.2
ATR0665G008 Amborella trichopoda HOM05D003838 ORTHO05D004444 6.1e-29 131.7 144 44.4
Os02g0669700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 6.1e-29 131.7 194 38.7
FAN22G1473 Fragaria x ananassa HOM05D003838 ORTHO05D004444 1.0e-28 131.0 130 45.4
Rhsim12G0057800 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.6e-27 126.3 148 44.6
RcHm_v2.0_Chr4g0390851 Rosa chinensis HOM05D003838 ORTHO05D004444 2.8e-21 106.3 114 42.1
CDE08G1258 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 8.0e-21 104.8 193 34.2
MD16G1210800 Malus domestica HOM05D003838 ORTHO05D004444 7.5e-19 98.2 114 44.7
Rhsim12G0009000 Rhododendron simsii HOM05D003838 ORTHO05D004444 1.1e-17 94.4 183 33.3
Peaxi162Scf01029g00016 Petunia axillaris HOM05D003838 ORTHO05D004444 5.6e-14 82.0 195 29.7
CBR_g15988 Chara braunii HOM05D003838 ORTHO05D004444 9.5e-14 81.3 200 26.0
FAN17G0891 Fragaria x ananassa HOM05D003838 ORTHO05D004444 1.6e-13 80.5 105 40.0
CBR_g31525 Chara braunii HOM05D003838 ORTHO05D004444 2.8e-13 79.7 197 26.9
Actinidia06873 Actinidia chinensis HOM05D003838 ORTHO05D004444 8.0e-13 78.2 185 33.0
Sopen04g016210 Solanum pennellii HOM05D003838 ORTHO05D004444 3.4e-11 72.8 84 45.2
Mapoly0037s0121 Marchantia polymorpha HOM05D003838 ORTHO05D004444 2.9e-10 69.7 169 27.8
Solyc04g040053.1 Solanum lycopersicum HOM05D003838 ORTHO05D004444 1.4e-09 67.4 74 40.5
Solyc04g040010.3 Solanum lycopersicum HOM05D003838 ORTHO05D004444 2.0e-08 63.5 76 36.8


User provided reference genes

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