Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 1.7e-303 1045.8 803 100.0
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 1.4e-220 770.4 771 87.3
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 1.4e-196 690.6 775 80.3
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.6e-195 686.4 778 80.2
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 7.1e-193 678.3 783 78.7
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 9.3e-193 677.9 783 79.3
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 1.3e-189 667.5 776 78.1
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 6.9e-188 661.8 769 79.3
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 2.4e-185 653.3 780 77.3
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 9.3e-185 651.4 780 78.1
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 9.3e-185 651.4 780 78.1
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 5.6e-182 642.1 792 75.1
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 9.0e-180 634.8 792 74.6
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 2.1e-176 623.6 785 75.4
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 2.1e-176 623.6 780 76.9
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 2.8e-173 613.2 780 76.4
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.4e-161 574.3 776 73.8
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 9.1e-156 555.1 777 74.3
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 1.4e-148 531.2 839 68.4
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 6.9e-148 528.9 792 71.0
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 3.8e-146 523.1 780 72.4
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 8.5e-146 521.9 771 72.0
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 2.1e-144 517.3 832 68.1
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 6.1e-144 515.8 833 69.0
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 1.8e-143 514.2 822 68.0
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 4.4e-142 509.6 770 71.7
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.7e-141 507.7 836 67.8
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.7e-141 507.7 836 67.8
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 2.8e-141 506.9 779 56.4
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 5.3e-140 502.7 836 67.6
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 7.0e-140 502.3 795 69.3
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 7.0e-140 502.3 783 69.7
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 1.2e-139 501.5 835 66.9
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.0e-139 500.7 846 66.0
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 4.5e-139 499.6 830 67.5
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.0e-138 498.4 793 68.9
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 6.5e-138 495.7 853 66.5
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 8.5e-138 495.4 773 71.0
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 1.1e-137 495.0 790 70.6
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 1.1e-137 495.0 782 69.6
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 1.9e-137 494.2 834 67.7
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 9.4e-137 491.9 827 66.9
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 1.8e-135 487.6 787 68.9
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.8e-135 487.6 819 66.5
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 5.2e-135 486.1 819 66.7
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 7.5e-134 482.3 773 70.2
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 7.5e-134 482.3 775 69.9
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 1.7e-133 481.1 769 68.7
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.8e-133 480.3 810 67.9
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 8.2e-133 478.8 843 64.7
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 4.1e-132 476.5 774 70.4
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 5.3e-132 476.1 820 67.4
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 7.7e-131 472.2 813 67.4
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.0e-130 471.9 770 68.6
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.5e-129 467.2 813 66.9
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 3.2e-129 466.8 776 68.9
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 9.4e-129 465.3 809 65.0
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.6e-128 464.5 810 66.7
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 2.7e-128 463.8 787 63.7
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 2.7e-128 463.8 643 79.0
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.6e-128 463.4 810 66.5
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 1.8e-127 461.1 770 68.6
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 5.7e-126 456.1 817 62.3
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 6.3e-125 452.6 869 39.5
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 9.1e-124 448.7 799 63.0
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 9.1e-124 448.7 805 63.9
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 1.6e-123 448.0 802 62.7
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 5.9e-123 446.0 781 63.9
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.0e-122 445.3 802 62.6
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.7e-122 444.5 773 68.0
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.7e-122 444.5 773 68.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 2.3e-122 444.1 805 62.4
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 2.3e-122 444.1 809 65.0
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 1.1e-121 441.8 765 67.7
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 4.2e-121 439.9 782 66.8
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 5.5e-121 439.5 797 62.4
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 9.5e-121 438.7 836 64.8
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-120 438.3 785 62.8
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 1.2e-120 438.3 785 59.4
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 8.9e-119 432.2 789 65.7
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 7.5e-118 429.1 772 66.8
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.7e-117 427.9 786 64.8
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 2.4e-116 424.1 766 67.4
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 7.0e-116 422.5 796 62.4
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 1.5e-113 414.8 773 65.3
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 2.5e-113 414.1 771 65.2
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 4.7e-112 409.8 792 64.6
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 7.5e-110 402.5 793 57.0
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.6e-107 394.8 771 65.2
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 1.5e-105 388.3 710 70.4
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.8e-103 381.3 733 57.8
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 3.4e-102 377.1 779 63.9
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 3.4e-102 377.1 936 37.7
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 6.2e-96 356.3 766 57.4
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.4e-95 355.1 773 52.1
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 5.8e-94 349.7 217 79.7
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 9.9e-94 349.0 218 79.4
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 1.6e-91 341.7 783 63.1
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 2.8e-88 330.9 218 75.2
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.1e-87 328.9 803 58.3
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 1.3e-85 322.0 217 72.8
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 2.1e-80 304.7 218 69.7
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 4.0e-79 300.4 701 55.9
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 3.8e-77 293.9 218 66.1
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 9.3e-76 289.3 331 52.9
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.2e-72 276.6 568 57.6
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.2e-70 272.3 346 49.4
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.4e-68 265.4 227 58.6
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 7.6e-62 243.0 160 72.5
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.3e-57 227.3 334 47.0
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 2.6e-54 218.0 706 53.0
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 4.6e-51 207.2 193 60.6
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 7.9e-51 206.5 770 43.0
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 7.4e-49 199.9 291 45.4
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.5e-46 192.2 775 46.1
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 1.5e-41 175.6 123 69.1
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 2.2e-40 171.8 99 75.8
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 3.8e-37 161.0 107 72.9
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-31 142.9 112 67.9
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 1.8e-26 125.6 267 34.5
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 3.5e-22 111.3 601 29.6
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 3.5e-22 111.3 71 73.2
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 5.0e-21 107.5 225 37.8
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 2.8e-16 91.7 221 32.6
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 3.5e-14 84.7 87 64.4
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.5e-12 78.6 121 38.8
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 6.1e-11 73.9 141 32.6
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.8e-10 70.5 41 80.5
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.3e-08 63.9 44 68.2
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 2.0e-06 58.9 60 55.0
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 2.0e-06 58.9 60 55.0


User provided reference genes

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