Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 1.6e-146 522.7 253 100.0
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 8.4e-132 473.8 253 90.5
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 8.4e-132 473.8 253 87.7
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 7.1e-131 470.7 254 88.2
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.2e-130 469.9 253 87.0
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.2e-130 469.9 253 87.0
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 3.5e-130 468.4 254 88.2
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 7.8e-130 467.2 252 86.9
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 8.6e-129 463.8 252 86.5
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 8.6e-129 463.8 253 85.4
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 7.3e-128 460.7 253 86.2
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.4e-126 456.4 254 86.2
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 2.0e-125 452.6 253 82.6
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 1.3e-124 449.9 253 82.6
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 2.2e-124 449.1 254 85.0
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 2.7e-122 442.2 253 81.8
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.0e-121 440.3 253 82.2
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.3e-121 439.9 254 79.1
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 3.0e-121 438.7 263 77.9
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 6.6e-121 437.6 253 80.6
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 4.3e-120 434.9 253 79.8
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 5.6e-120 434.5 253 78.7
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.3e-119 433.3 250 78.4
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.6e-119 433.0 253 77.5
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.1e-119 432.6 253 77.1
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 2.8e-119 432.2 253 77.1
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.6e-119 431.8 253 78.7
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 3.6e-119 431.8 253 78.7
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 6.2e-119 431.0 253 79.1
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 6.2e-119 431.0 253 78.3
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 6.2e-119 431.0 253 77.1
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 8.1e-119 430.6 253 78.3
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 1.4e-118 429.9 253 78.3
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.8e-118 429.5 240 82.9
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 1.8e-118 429.5 253 77.9
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 2.4e-118 429.1 253 77.9
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 9.0e-118 427.2 240 82.5
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 9.0e-118 427.2 252 78.2
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 2.0e-117 426.0 252 76.2
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 2.6e-117 425.6 252 81.0
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.6e-117 425.6 253 77.9
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 5.8e-117 424.5 254 76.0
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 7.6e-117 424.1 253 77.9
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.7e-116 422.9 254 75.6
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 3.8e-116 421.8 253 75.5
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 3.8e-116 421.8 253 77.5
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 4.9e-116 421.4 253 76.7
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 6.4e-116 421.0 253 77.5
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.9e-115 419.5 254 75.2
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 7.1e-115 417.5 251 75.3
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.1e-114 416.0 240 77.9
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 2.1e-114 416.0 253 75.5
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 3.5e-114 415.2 252 76.2
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 3.5e-114 415.2 253 76.3
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 4.6e-114 414.8 253 75.1
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 7.9e-114 414.1 253 75.9
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 7.9e-114 414.1 253 73.5
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.3e-113 412.5 252 77.0
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 3.9e-113 411.8 251 75.3
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 3.9e-113 411.8 253 75.1
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 1.1e-112 410.2 253 74.7
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 3.3e-112 408.7 253 73.9
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.3e-112 408.7 240 77.1
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 3.3e-112 408.7 254 71.7
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 5.6e-112 407.9 250 73.6
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 7.4e-112 407.5 253 75.1
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 2.8e-111 405.6 253 75.1
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 3.7e-111 405.2 253 73.9
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 8.1e-111 404.1 253 73.9
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 9.0e-110 400.6 253 73.1
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 5.8e-109 397.9 253 72.7
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.7e-108 396.4 254 70.9
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.7e-108 396.4 254 70.5
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 4.9e-108 394.8 254 70.1
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 1.4e-107 393.3 254 69.7
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.4e-107 393.3 250 73.2
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.2e-107 392.1 253 75.1
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 4.2e-107 391.7 254 70.1
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 7.1e-107 391.0 254 70.5
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 2.7e-106 389.0 254 68.9
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 2.7e-106 389.0 253 70.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.0e-105 387.1 250 70.4
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 3.9e-105 385.2 253 70.4
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 8.7e-105 384.0 253 68.0
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 8.7e-105 384.0 253 71.5
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 7.4e-104 380.9 249 68.3
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 2.8e-103 379.0 252 66.7
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 3.7e-103 378.6 254 66.9
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 3.1e-102 375.6 239 69.9
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 6.9e-102 374.4 248 69.4
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.2e-100 369.4 253 68.0
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 2.9e-100 369.0 253 66.8
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 2.9e-100 369.0 253 67.2
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 3.8e-100 368.6 253 66.8
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.9e-96 356.3 240 71.2
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.6e-95 353.2 241 68.0
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 4.1e-94 348.6 254 63.0
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 5.0e-92 341.7 250 63.6
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.1e-91 340.5 253 63.6
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 1.4e-91 340.1 194 78.9
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 6.1e-90 334.7 202 76.7
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 5.1e-89 331.6 251 62.2
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 2.4e-86 322.8 251 59.0
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 3.4e-85 318.9 192 75.5
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 2.9e-84 315.8 251 58.6
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 1.3e-76 290.4 251 53.4
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 5.7e-72 275.0 249 52.6
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 4.0e-57 225.7 257 41.6
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 6.8e-49 198.4 254 44.5
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 2.6e-48 196.4 133 65.4
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 3.5e-45 186.0 186 56.5
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 6.1e-42 175.3 221 39.8
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 2.9e-39 166.4 166 50.0
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.4e-38 164.1 130 61.5
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 2.4e-38 163.3 130 61.5
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 3.2e-38 162.9 144 56.2
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.6e-37 159.1 93 82.8
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 3.1e-33 146.4 93 76.3
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.8e-32 141.4 74 82.4
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 2.9e-31 139.8 94 63.8
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.1e-30 137.9 99 63.6
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.7e-28 130.6 93 66.7
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 4.0e-25 119.4 105 60.0
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 4.6e-21 105.9 129 42.6
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.2e-10 71.2 48 70.8
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 3.6e-10 69.7 49 57.1
arahy.Tifrunner.gnm1.ann1.48QRQ3 Arachis hypogaea HOM05D002189 ORTHO05D002233 4.9e-07 59.3 36 77.8


User provided reference genes

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