Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0377521 Lupinus albus HOM05D001533 ORTHO05D005122 1.2e-149 533.5 345 100.0
Glyma.01G166700 Glycine max HOM05D001533 ORTHO05D005122 9.1e-113 411.0 345 68.1
Lalb_Chr09g0321781 Lupinus albus HOM05D001533 ORTHO05D005122 1.5e-112 410.2 345 70.4
Phvul.002G109200 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 4.7e-109 398.7 345 66.4
MD02G1133400 Malus domestica HOM05D001533 ORTHO05D005122 1.4e-108 397.1 345 65.5
Lj2g0008453 Lotus japonicus HOM05D001533 ORTHO05D005122 8.8e-108 394.4 345 66.1
Glyma.02G049100 Glycine max HOM05D001533 ORTHO05D005122 2.0e-107 393.3 345 67.5
Lj4g0002557 Lotus japonicus HOM05D001533 ORTHO05D005122 2.0e-107 393.3 345 65.8
QL06p033501 Quercus lobata HOM05D001533 ORTHO05D005122 5.7e-107 391.7 344 65.4
Prupe.7G167200 Prunus persica HOM05D001533 ORTHO05D005122 1.7e-106 390.2 345 64.1
VMungo0251G1454 Vigna mungo HOM05D001533 ORTHO05D005122 2.2e-106 389.8 345 67.0
VMungo1215G1138 Vigna mungo HOM05D001533 ORTHO05D005122 2.8e-106 389.4 345 64.9
Glyma.16G129200 Glycine max HOM05D001533 ORTHO05D005122 4.8e-106 388.7 340 70.0
Phvul.003G262700 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 4.1e-105 385.6 345 66.4
Dinv33621 Davidia involucrata HOM05D001533 ORTHO05D005122 7.0e-105 384.8 345 68.4
RcHm_v2.0_Chr2g0099581 Rosa chinensis HOM05D001533 ORTHO05D005122 1.2e-104 384.0 345 63.8
vmacro18418 Vaccinium macrocarpon HOM05D001533 ORTHO05D005122 2.6e-104 382.9 345 62.6
Rhsim08G0034200 Rhododendron simsii HOM05D001533 ORTHO05D005122 3.5e-104 382.5 345 62.9
Thecc.01G020200 Theobroma cacao HOM05D001533 ORTHO05D005122 3.5e-104 382.5 345 63.5
Ciclev10025997m.g Citrus clementina HOM05D001533 ORTHO05D005122 4.5e-104 382.1 345 62.9
Cfa006964 Carpinus fangiana HOM05D001533 ORTHO05D005122 2.9e-103 379.4 335 64.5
COL.COLO4_21923 Corchorus olitorius HOM05D001533 ORTHO05D005122 2.9e-103 379.4 346 63.0
Haze_03774 Corylus avellana HOM05D001533 ORTHO05D005122 5.0e-103 378.6 335 64.2
TWI53G2031 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 6.5e-103 378.3 342 63.2
Manes.01G145100 Manihot esculenta HOM05D001533 ORTHO05D005122 8.5e-103 377.9 345 62.3
Peaxi162Scf00083g00714 Petunia axillaris HOM05D001533 ORTHO05D005122 1.5e-102 377.1 345 61.4
FvH4_1g11960 Fragaria vesca HOM05D001533 ORTHO05D005122 3.2e-102 375.9 345 62.6
FAN19G0503 Fragaria x ananassa HOM05D001533 ORTHO05D005122 9.4e-102 374.4 345 62.3
MELO3C016393.2 Cucumis melo HOM05D001533 ORTHO05D005122 1.2e-101 374.0 345 62.0
TWI09G0584 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 1.2e-101 374.0 345 61.4
CiPaw.07G057700 Carya illinoinensis HOM05D001533 ORTHO05D005122 1.6e-101 373.6 337 62.3
Duzib264G0112 Durio zibethinus HOM05D001533 ORTHO05D005122 1.6e-101 373.6 345 71.9
Gohir.D03G010000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.6e-101 373.6 345 72.2
Gorai.003G010300 Gossypium raimondii HOM05D001533 ORTHO05D005122 2.1e-101 373.2 345 68.7
Cpa.g.sc6.238 Carica papaya HOM05D001533 ORTHO05D005122 2.7e-101 372.9 345 61.7
CiPaw.08G132200 Carya illinoinensis HOM05D001533 ORTHO05D005122 2.7e-101 372.9 345 60.6
FAN26G0519 Fragaria x ananassa HOM05D001533 ORTHO05D005122 2.7e-101 372.9 345 62.0
FAN28G1062 Fragaria x ananassa HOM05D001533 ORTHO05D005122 3.6e-101 372.5 345 62.0
Actinidia31002 Actinidia chinensis HOM05D001533 ORTHO05D005122 4.7e-101 372.1 345 60.6
FAN23G2041 Fragaria x ananassa HOM05D001533 ORTHO05D005122 4.7e-101 372.1 345 62.0
Ca_22369_v3 Cicer arietinum L. HOM05D001533 ORTHO05D005122 8.0e-101 371.3 345 65.2
Nitab4.5_0006286g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 8.0e-101 371.3 345 60.6
Gohir.A02G170000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.0e-100 370.9 345 68.4
TPR.G30063 Trifolium pratense HOM05D001533 ORTHO05D005122 1.8e-100 370.2 345 62.9
CsaV3_4G005560 Cucumis sativus L. HOM05D001533 ORTHO05D005122 3.0e-100 369.4 345 61.4
CAN.G1671.6 Capsicum annuum HOM05D001533 ORTHO05D005122 4.4e-99 365.5 345 59.7
Potri.007G012600 Populus trichocarpa HOM05D001533 ORTHO05D005122 5.7e-99 365.2 343 61.2
Potri.005G115500 Populus trichocarpa HOM05D001533 ORTHO05D005122 7.5e-99 364.8 343 61.5
arahy.Tifrunner.gnm1.ann1.H1V2NS Arachis hypogaea HOM05D001533 ORTHO05D005122 1.3e-98 364.0 328 64.6
Cc00_g26600 Coffea canephora HOM05D001533 ORTHO05D005122 1.3e-98 364.0 345 59.1
Peaxi162Scf00034g00264 Petunia axillaris HOM05D001533 ORTHO05D005122 1.3e-98 364.0 345 64.3
ClCG07G008590 Citrullus lanatus HOM05D001533 ORTHO05D005122 6.3e-98 361.7 335 61.5
Duzib187G1725 Durio zibethinus HOM05D001533 ORTHO05D005122 1.1e-97 360.9 347 60.5
TAR381G0830 Trochodendron aralioides HOM05D001533 ORTHO05D005122 1.4e-97 360.5 345 59.7
Glyma.11G076600 Glycine max HOM05D001533 ORTHO05D005122 1.8e-97 360.1 331 64.4
Sabra05G0094600 Salix brachista HOM05D001533 ORTHO05D005122 4.1e-97 359.0 372 57.8
Lalb_Chr05g0229891 Lupinus albus HOM05D001533 ORTHO05D005122 7.0e-97 358.2 345 70.1
Sed0027203 Sechium edule HOM05D001533 ORTHO05D005122 1.2e-96 357.5 342 60.2
Solyc02g083990.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 4.5e-96 355.5 345 58.3
CANSAT01G1879 Cannabis sativa HOM05D001533 ORTHO05D005122 3.8e-95 352.4 345 68.1
Sopen02g028790 Solanum pennellii HOM05D001533 ORTHO05D005122 5.0e-95 352.1 345 57.7
Gorai.007G195800 Gossypium raimondii HOM05D001533 ORTHO05D005122 1.1e-94 350.9 345 69.3
Gohir.A11G176200 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.9e-94 350.1 345 67.2
MSTRG.2705 Avicennia marina HOM05D001533 ORTHO05D005122 2.5e-94 349.7 318 67.9
SGA_v2.0_scaffold137G35090 Striga asiatica HOM05D001533 ORTHO05D005122 3.2e-94 349.4 345 62.9
CSS0008566 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 4.2e-94 349.0 317 62.8
TAR628G0959 Trochodendron aralioides HOM05D001533 ORTHO05D005122 4.2e-94 349.0 345 69.9
CAN.G893.6 Capsicum annuum HOM05D001533 ORTHO05D005122 1.6e-93 347.1 345 56.2
Gohir.D11G183900 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.6e-93 347.1 345 69.0
Nn6g32353 Nelumbo nucifera HOM05D001533 ORTHO05D005122 4.7e-93 345.5 340 58.8
Atru.chr3.790 Acer truncatum HOM05D001533 ORTHO05D005122 1.8e-92 343.6 345 64.9
Hma1.2p1_0743F.1_g211570 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 1.8e-92 343.6 345 63.8
Duzib147G0876 Durio zibethinus HOM05D001533 ORTHO05D005122 2.6e-91 339.7 345 67.0
Manes.02G103600 Manihot esculenta HOM05D001533 ORTHO05D005122 5.7e-91 338.6 345 62.6
Solyc03g033580.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 5.7e-91 338.6 345 55.7
Nn5g29330 Nelumbo nucifera HOM05D001533 ORTHO05D005122 1.3e-90 337.4 339 67.8
SalBow3G3323 Salvia bowleyana HOM05D001533 ORTHO05D005122 1.3e-90 337.4 394 58.4
Nitab4.5_0006119g0010 Nicotiana tabacum HOM05D001533 ORTHO05D005122 1.7e-90 337.0 341 62.8
Sopen03g006360 Solanum pennellii HOM05D001533 ORTHO05D005122 3.7e-90 335.9 345 55.4
DCAR_016613 Daucus carota HOM05D001533 ORTHO05D005122 4.1e-89 332.4 337 62.6
Nitab4.5_0000438g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 7.0e-89 331.6 314 57.6
CSS0030027 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 1.0e-87 327.8 345 56.8
Oeu035307.1 Olea europaea HOM05D001533 ORTHO05D005122 2.5e-86 323.2 345 63.8
arahy.Tifrunner.gnm1.ann1.JA3WP2 Arachis hypogaea HOM05D001533 ORTHO05D005122 1.6e-85 320.5 244 71.3
AUR62043756 Chenopodium quinoa HOM05D001533 ORTHO05D005122 1.6e-85 320.5 345 62.3
AUR62044201 Chenopodium quinoa HOM05D001533 ORTHO05D005122 1.6e-85 320.5 345 62.3
PSO170G0469 Papaver somniferum HOM05D001533 ORTHO05D005122 4.0e-84 315.8 341 54.0
GSVIVG01018794001 Vitis vinifera HOM05D001533 ORTHO05D005122 8.8e-84 314.7 345 64.1
CANSAT80G2154 Cannabis sativa HOM05D001533 ORTHO05D005122 8.3e-82 308.1 345 53.9
PSO700G0386 Papaver somniferum HOM05D001533 ORTHO05D005122 1.1e-81 307.8 341 52.8
AUR62007522 Chenopodium quinoa HOM05D001533 ORTHO05D005122 3.1e-81 306.2 338 60.9
Hma1.2p1_2281F.1_g318810 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 3.1e-81 306.2 244 65.2
Lj2C466T13 Lonicera japonica HOM05D001533 ORTHO05D005122 1.6e-80 303.9 346 53.2
ECA246G3074 Erigeron canadensis HOM05D001533 ORTHO05D005122 2.3e-79 300.1 338 61.2
MBI05_g43883_MAGBIO Magnolia biondii HOM05D001533 ORTHO05D005122 1.9e-78 297.0 338 66.6
EL10As8g23833 Beta vulgaris HOM05D001533 ORTHO05D005122 3.3e-78 296.2 313 62.6
Sc16g0002080 Simmondsia chinensis HOM05D001533 ORTHO05D005122 4.3e-78 295.8 345 64.1
Eucgr.J02426 Eucalyptus grandis HOM05D001533 ORTHO05D005122 1.6e-77 293.9 346 52.6
Hund16484 Selenicereus undatus HOM05D001533 ORTHO05D005122 8.0e-77 291.6 345 57.1
Psat4g098560 Pisum sativum HOM05D001533 ORTHO05D005122 3.4e-75 286.2 346 60.4
Lj4C217T16 Lonicera japonica HOM05D001533 ORTHO05D005122 3.2e-73 279.6 373 48.0
CDE04G1263 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 4.6e-72 275.8 334 58.7
Nitab4.5_0001959g0020 Nicotiana tabacum HOM05D001533 ORTHO05D005122 7.8e-72 275.0 244 60.7
CDE02G4489 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 3.0e-71 273.1 335 59.4
PGSC0003DMG400003635 Solanum tuberosum HOM05D001533 ORTHO05D005122 7.3e-70 268.5 217 63.6
THA.LOC104804260 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 9.5e-70 268.1 347 49.0
THA.LOC104807492 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 9.5e-70 268.1 345 48.7
Medtr8g076020 Medicago truncatula HOM05D001533 ORTHO05D005122 2.8e-69 266.5 345 62.6
Os06g0715400 Oryza sativa ssp. japonica HOM05D001533 ORTHO05D005122 1.1e-68 264.6 322 49.4
PGR119G1411 Punica granatum HOM05D001533 ORTHO05D005122 1.1e-68 264.6 346 53.5
Oeu005320.1 Olea europaea HOM05D001533 ORTHO05D005122 5.2e-68 262.3 296 53.0
Zm00001eb228040 Zea mays HOM05D001533 ORTHO05D005122 8.3e-66 255.0 325 48.9
Aa31LG1G14750 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.4e-65 254.2 343 46.9
Sp3g31420 Schrenkiella parvula HOM05D001533 ORTHO05D005122 7.8e-64 248.4 348 47.1
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 3.3e-62 243.0 245 58.0
AT2G17990 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 1.4e-60 237.7 350 46.3
AL3G51060 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 1.5e-59 234.2 349 45.8
Carub.0003s3213 Capsella rubella HOM05D001533 ORTHO05D005122 4.4e-59 232.6 348 46.0
Thhalv10004494m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 1.1e-57 228.0 314 45.9
Thhalv10022777m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 1.9e-57 227.3 348 46.0
Aqoxy6G02302 Aquilegia oxysepala HOM05D001533 ORTHO05D005122 2.4e-57 226.9 328 46.6
A07p02680 Brassica napus HOM05D001533 ORTHO05D005122 6.0e-56 222.2 346 46.5
BraA07t28064Z Brassica rapa HOM05D001533 ORTHO05D005122 6.0e-56 222.2 346 46.5
CARHR108480 Cardamine hirsuta HOM05D001533 ORTHO05D005122 1.0e-55 221.5 324 46.9
C07p04980 Brassica napus HOM05D001533 ORTHO05D005122 8.6e-55 218.4 346 46.0
Ah.02g124450 Amaranthus hybridus HOM05D001533 ORTHO05D005122 1.5e-54 217.6 253 51.8
BcaC06g36351 Brassica carinata HOM05D001533 ORTHO05D005122 7.3e-54 215.3 346 45.4
Aa31LG8G15170 Aethionema arabicum HOM05D001533 ORTHO05D005122 9.5e-54 214.9 348 43.7
Oeu048459.1 Olea europaea HOM05D001533 ORTHO05D005122 2.1e-53 213.8 236 55.5
BcaB08g34783 Brassica carinata HOM05D001533 ORTHO05D005122 6.8e-52 208.8 346 43.4
Sp2g30440 Schrenkiella parvula HOM05D001533 ORTHO05D005122 8.9e-52 208.4 320 46.6
AL6G43540 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 1.3e-50 204.5 346 42.5
ATR0680G362 Amborella trichopoda HOM05D001533 ORTHO05D005122 2.9e-50 203.4 335 48.4
AT5G66250 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 1.9e-49 200.7 316 44.0
AL8G45270 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 7.8e-48 195.3 344 41.6
Lsat_1_v5_gn_4_146800 Lactuca sativa HOM05D001533 ORTHO05D005122 3.9e-47 193.0 356 48.9
Lsat_1_v5_gn_4_146821 Lactuca sativa HOM05D001533 ORTHO05D005122 3.3e-46 189.9 354 48.3
A06p33470 Brassica napus HOM05D001533 ORTHO05D005122 6.2e-45 185.7 333 42.0
Aa31LG6G13050 Aethionema arabicum HOM05D001533 ORTHO05D005122 8.1e-45 185.3 345 38.0
Thhalv10025665m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 3.1e-44 183.3 339 40.1
BraA06t26280Z Brassica rapa HOM05D001533 ORTHO05D005122 2.6e-43 180.3 328 40.5
Carub.0008s2824 Capsella rubella HOM05D001533 ORTHO05D005122 3.4e-43 179.9 343 39.9
Sp7g33880 Schrenkiella parvula HOM05D001533 ORTHO05D005122 1.3e-42 177.9 312 40.1
BolC3t18147H Brassica oleracea HOM05D001533 ORTHO05D005122 1.7e-42 177.6 341 41.3
C09p11970 Brassica napus HOM05D001533 ORTHO05D005122 3.2e-41 173.3 285 43.5
HanXRQChr16g0531321 Helianthus annuus HOM05D001533 ORTHO05D005122 5.4e-41 172.6 186 51.1
AagrBONN_evm.TU.Sc2ySwM_228.4945 Anthoceros agrestis HOM05D001533 ORTHO05D005122 1.0e-39 168.3 339 34.2
A09p10100 Brassica napus HOM05D001533 ORTHO05D005122 1.0e-39 168.3 284 42.6
C03p58890 Brassica napus HOM05D001533 ORTHO05D005122 1.0e-39 168.3 340 40.0
SEGI_32707 Sequoiadendron giganteum HOM05D001533 ORTHO05D005122 1.0e-39 168.3 343 37.3
BcaNung04495 Brassica carinata HOM05D001533 ORTHO05D005122 2.3e-39 167.2 228 45.6
BolC9t54085H Brassica oleracea HOM05D001533 ORTHO05D005122 6.6e-39 165.6 303 40.9
Carub.0007s0413 Capsella rubella HOM05D001533 ORTHO05D005122 2.5e-38 163.7 324 38.0
BraA09t36653Z Brassica rapa HOM05D001533 ORTHO05D005122 4.3e-38 162.9 296 40.9
SMO358G0186 Selaginella moellendorffii HOM05D001533 ORTHO05D005122 2.0e-35 154.1 290 36.6
BolC7t40899H Brassica oleracea HOM05D001533 ORTHO05D005122 5.8e-35 152.5 245 44.9
AT4G36105 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 1.1e-30 138.3 306 37.9
MD15G1246600 Malus domestica HOM05D001533 ORTHO05D005122 5.3e-28 129.4 138 57.2
AUR62043805 Chenopodium quinoa HOM05D001533 ORTHO05D005122 8.4e-26 122.1 157 65.0
BcaNung04499 Brassica carinata HOM05D001533 ORTHO05D005122 1.1e-25 121.7 230 39.6
CARHR281470 Cardamine hirsuta HOM05D001533 ORTHO05D005122 1.2e-24 118.2 211 41.2
HPP92_007128 Vanilla planifolia HOM05D001533 ORTHO05D005122 5.1e-23 112.8 176 41.5
CARHR244500 Cardamine hirsuta HOM05D001533 ORTHO05D005122 9.0e-20 102.1 315 34.3
unitig_899.g14709 Utricularia gibba HOM05D001533 ORTHO05D000063 2.0e-19 100.9 143 45.5
BcaNung00764 Brassica carinata HOM05D001533 ORTHO05D024397 2.2e-13 80.9 298 43.6
arahy.Tifrunner.gnm1.ann1.2HD0B7 Arachis hypogaea HOM05D001533 ORTHO05D019802 2.8e-13 80.5 54 81.5
CARHR281460 Cardamine hirsuta HOM05D001533 ORTHO05D019802 2.8e-13 80.5 55 78.2
C01p02930 Brassica napus HOM05D001533 ORTHO05D024397 1.1e-12 78.6 284 30.6
BolC1t00279H Brassica oleracea HOM05D001533 ORTHO05D024397 1.2e-08 65.1 298 28.2
A09p11640 Brassica napus HOM05D001533 ORTHO05D019802 5.1e-07 59.7 42 78.6
BolC9t54258H Brassica oleracea HOM05D001533 ORTHO05D019802 1.1e-06 58.5 42 76.2
BraA09t36810Z Brassica rapa HOM05D001533 ORTHO05D019802 1.9e-06 57.8 41 78.0


User provided reference genes

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