Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0368651 Lupinus albus HOM05D003792 ORTHO05D003195 3.9e-108 394.8 201 100.0
Lalb_Chr22g0355111 Lupinus albus HOM05D003792 ORTHO05D003195 4.1e-57 225.3 196 66.8
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 8.0e-45 184.5 181 58.6
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 1.1e-44 184.1 178 59.0
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 1.8e-44 183.3 181 59.1
Phvul.001G022200 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 8.9e-44 181.0 183 58.5
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 5.1e-39 165.2 199 53.8
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 5.1e-39 165.2 199 53.8
Medtr1g019360 Medicago truncatula HOM05D003792 ORTHO05D003195 1.1e-38 164.1 177 53.1
TPR.G3791 Trifolium pratense HOM05D003792 ORTHO05D003195 1.2e-37 160.6 190 51.6
Lj5g0016368 Lotus japonicus HOM05D003792 ORTHO05D003195 9.2e-33 144.4 178 51.7
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 6.2e-29 131.7 188 42.6
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.1e-28 131.0 185 44.9
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 1.8e-28 130.2 196 42.9
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 3.1e-28 129.4 181 41.4
Psat6g012520 Pisum sativum HOM05D003792 ORTHO05D003195 1.5e-27 127.1 182 46.7
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 2.6e-27 126.3 196 38.8
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 6.4e-26 121.7 189 40.7
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 8.4e-26 121.3 189 39.7
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 1.9e-25 120.2 174 40.2
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.9e-25 120.2 206 38.8
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 2.1e-24 116.7 194 39.7
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.7e-24 116.3 182 41.2
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 3.5e-24 115.9 193 38.3
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 4.6e-24 115.5 192 39.1
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 7.8e-24 114.8 183 38.3
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 1.7e-23 113.6 127 52.8
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 1.7e-23 113.6 180 38.9
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 2.3e-23 113.2 207 36.7
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 3.0e-23 112.8 198 39.4
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 5.1e-23 112.1 197 38.6
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 6.6e-23 111.7 195 40.5
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 1.9e-22 110.2 176 42.0
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 3.6e-21 105.9 201 37.3
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 8.1e-21 104.8 169 38.5
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 8.1e-21 104.8 169 41.4
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 2.4e-20 103.2 191 35.6
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.1e-20 102.8 133 45.9
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 3.1e-20 102.8 133 45.9
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 3.1e-20 102.8 188 36.2
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 4.0e-20 102.4 191 37.2
Gohir.D01G108300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.3e-20 102.1 126 47.6
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 5.3e-20 102.1 207 33.8
MELO3C016754.2 Cucumis melo HOM05D003792 ORTHO05D003195 9.0e-20 101.3 173 38.2
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 9.0e-20 101.3 141 44.0
Gorai.002G132500 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.2e-19 100.9 126 47.6
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 1.5e-19 100.5 185 37.3
CsaV3_4G034340 Cucumis sativus L. HOM05D003792 ORTHO05D003195 2.0e-19 100.1 203 34.5
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 2.0e-19 100.1 192 37.0
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 2.0e-19 100.1 172 41.3
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 2.6e-19 99.8 192 37.0
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 2.6e-19 99.8 125 48.8
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.6e-19 99.8 125 48.8
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.6e-19 99.8 167 38.3
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 3.4e-19 99.4 188 33.5
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 4.4e-19 99.0 175 38.3
Sed0003020 Sechium edule HOM05D003792 ORTHO05D003195 4.4e-19 99.0 185 36.2
Lsat_1_v5_gn_4_125741 Lactuca sativa HOM05D003792 ORTHO05D003195 5.8e-19 98.6 211 35.5
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.3e-18 97.4 179 39.7
Actinidia38059 Actinidia chinensis HOM05D004168 ORTHO05D004999 1.7e-18 97.1 196 34.7
Rhsim07G0228200 Rhododendron simsii HOM05D003792 ORTHO05D003195 1.7e-18 97.1 114 44.7
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 3.8e-18 95.9 175 37.7
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.8e-18 95.9 197 38.1
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 4.9e-18 95.5 176 39.2
Cc10_g04110 Coffea canephora HOM05D003792 ORTHO05D003195 4.9e-18 95.5 182 35.2
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 4.9e-18 95.5 185 36.2
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 6.4e-18 95.1 199 36.2
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 1.1e-17 94.4 200 38.5
GSVIVG01024176001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.1e-17 94.4 181 36.5
ECA232G3551 Erigeron canadensis HOM05D003792 ORTHO05D003195 1.4e-17 94.0 186 37.1
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.4e-17 93.2 121 46.3
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 3.2e-17 92.8 195 33.3
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 4.2e-17 92.4 202 34.2
Ciclev10002531m.g Citrus clementina HOM05D003792 ORTHO05D003195 4.2e-17 92.4 106 44.3
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 9.3e-17 91.3 176 38.1
Gohir.A01G120000 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.2e-16 90.9 126 44.4
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 1.2e-16 90.9 190 35.8
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 1.6e-16 90.5 190 37.9
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 2.7e-16 89.7 195 32.8
PGSC0003DMG402007970 Solanum tuberosum HOM05D003792 ORTHO05D003195 2.7e-16 89.7 196 31.1
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 4.6e-16 89.0 183 36.1
Sopen04g032480 Solanum pennellii HOM05D003792 ORTHO05D003195 7.8e-16 88.2 196 31.6
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 2.3e-15 86.7 186 34.4
BcaC02g10794 Brassica carinata HOM05D003792 ORTHO05D003195 6.6e-15 85.1 169 36.7
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 6.6e-15 85.1 189 31.7
Haze_17521 Corylus avellana HOM05D000207 ORTHO05D000606 1.1e-14 84.3 177 33.9
ECA246G0047 Erigeron canadensis HOM05D003792 ORTHO05D003195 1.1e-14 84.3 191 32.5
Hund23000 Selenicereus undatus HOM05D003792 ORTHO05D003195 1.5e-14 84.0 102 42.2
Solyc04g078880.3 Solanum lycopersicum HOM05D003792 ORTHO05D003195 1.9e-14 83.6 113 37.2
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 3.3e-14 82.8 175 35.4
C04p25040 Brassica napus HOM05D003792 ORTHO05D003195 3.3e-14 82.8 170 36.5
BolC4t24005H Brassica oleracea HOM05D003792 ORTHO05D003195 3.3e-14 82.8 170 36.5
Thhalv10003264m.g Eutrema salsugineum HOM05D003792 ORTHO05D003195 3.3e-14 82.8 167 36.5
SalBow7G2289 Salvia bowleyana HOM05D003792 ORTHO05D003195 5.6e-14 82.0 208 28.8
Nn1g04847 Nelumbo nucifera HOM05D003792 ORTHO05D003195 7.3e-14 81.6 198 31.8
Lsat_1_v5_gn_6_111920 Lactuca sativa HOM05D003792 ORTHO05D003195 1.3e-13 80.9 126 38.9
Sabra02G0098600 Salix brachista HOM05D000207 ORTHO05D003195 2.1e-13 80.1 110 42.7
MBI03_g13463_MAGBIO Magnolia biondii HOM05D003792 ORTHO05D003195 3.6e-13 79.3 184 34.8
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 4.8e-13 79.0 191 33.5
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 4.8e-13 79.0 194 31.4
HanXRQChr05g0150801 Helianthus annuus HOM05D003792 ORTHO05D003195 4.8e-13 79.0 133 38.3
Peaxi162Scf00252g00410 Petunia axillaris HOM05D003792 ORTHO05D003195 8.1e-13 78.2 184 31.0
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 1.4e-12 77.4 124 36.3
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 1.4e-12 77.4 187 34.8
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.8e-12 77.0 200 31.5
THA.LOC104822850 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 3.1e-12 76.3 175 32.0
MSTRG.25091 Avicennia marina HOM05D003792 ORTHO05D003195 4.0e-12 75.9 175 33.7
Sc02g0007160 Simmondsia chinensis HOM05D003792 ORTHO05D003195 5.3e-12 75.5 167 35.9
THA.LOC104812575 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 6.9e-12 75.1 197 28.9
A06p48190 Brassica napus HOM05D003792 ORTHO05D003195 1.5e-11 73.9 169 36.1
BraA06t27688Z Brassica rapa HOM05D003792 ORTHO05D003195 1.5e-11 73.9 169 36.1
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.5e-11 73.9 162 32.7
Carub.0008s0601 Capsella rubella HOM05D003792 ORTHO05D003195 2.0e-11 73.6 158 32.3
PGR083G2840 Punica granatum HOM05D003792 ORTHO05D003195 2.6e-11 73.2 166 32.5
Sc15g0006120 Simmondsia chinensis HOM05D004168 ORTHO05D003195 2.6e-11 73.2 170 32.4
Migut.C00575 Erythranthe guttata HOM05D003792 ORTHO05D003195 3.4e-11 72.8 190 33.2
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 3.4e-11 72.8 180 35.0
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 3.4e-11 72.8 180 35.0
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 4.5e-11 72.4 164 32.9
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 9.9e-11 71.2 136 33.8
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 1.3e-10 70.9 177 31.1
Ah.11g043080 Amaranthus hybridus HOM05D003792 ORTHO05D003195 1.7e-10 70.5 115 35.7
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 1.7e-10 70.5 193 32.6
EL10As7g23733 Beta vulgaris HOM05D003792 ORTHO05D003195 2.2e-10 70.1 118 37.3
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.8e-10 69.3 195 28.2
Os03g0184100 Oryza sativa ssp. japonica HOM05D003792 ORTHO05D003195 3.8e-10 69.3 178 32.6
CDE08G1351 Ceratophyllum demersum HOM05D003792 ORTHO05D003195 6.4e-10 68.6 91 41.8
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 8.4e-10 68.2 171 33.9
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.1e-09 67.8 195 28.2
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 1.4e-09 67.4 164 31.7
Zm00001eb006310 Zea mays HOM05D003792 ORTHO05D003195 1.4e-09 67.4 175 31.4
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 1.9e-09 67.0 117 35.0
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 3.2e-09 66.2 200 35.0
MELO3C018454.2 Cucumis melo HOM05D003792 ORTHO05D003195 5.4e-09 65.5 161 30.4
arahy.Tifrunner.gnm1.ann1.V9AGNQ Arachis hypogaea HOM05D004168 ORTHO05D003195 1.2e-08 64.3 181 30.9
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.6e-08 63.9 192 31.8
HanXRQChr14g0439641 Helianthus annuus HOM05D003792 ORTHO05D003195 2.7e-08 63.2 173 31.2
A09p20080 Brassica napus HOM05D003792 ORTHO05D003195 6.0e-08 62.0 172 33.1
BraA09t37621Z Brassica rapa HOM05D003792 ORTHO05D003195 6.0e-08 62.0 172 33.1
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 7.9e-08 61.6 179 27.9
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 1.3e-07 60.8 129 32.6
BcaB07g31033 Brassica carinata HOM05D003792 ORTHO05D003195 2.3e-07 60.1 173 31.8
SEGI_08793 Sequoiadendron giganteum HOM05D019663 ORTHO05D003195 2.3e-07 60.1 117 34.2
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 3.0e-07 59.7 186 27.4
BcaC06g31740 Brassica carinata HOM05D003792 ORTHO05D003195 8.7e-07 58.2 168 33.3
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.1e-06 57.8 191 25.7
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 1.1e-06 57.8 110 31.8
PSO170G6463 Papaver somniferum HOM05D003792 ORTHO05D003195 1.9e-06 57.0 178 31.5
ClCG02G005970 Citrullus lanatus HOM05D003792 ORTHO05D003195 2.5e-06 56.6 163 29.4
SGA_v2.0_scaffold28G11774 Striga asiatica HOM05D000207 ORTHO05D000606 2.5e-06 56.6 157 31.8
AL7G17410 Arabidopsis lyrata HOM05D009953 ORTHO05D003195 3.3e-06 56.2 78 33.3
CARHR242110 Cardamine hirsuta HOM05D009953 ORTHO05D003195 3.3e-06 56.2 192 25.5
vmacro04447 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 4.3e-06 55.8 74 43.2
AT4G33980 Arabidopsis thaliana HOM05D009953 ORTHO05D003195 5.6e-06 55.5 95 31.6
arahy.Tifrunner.gnm1.ann1.TVNS6S Arachis hypogaea HOM05D004168 ORTHO05D004999 7.4e-06 55.1 167 29.9
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 7.4e-06 55.1 192 29.2
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 9.6e-06 54.7 182 28.0
Os07g0618700 Oryza sativa ssp. japonica HOM05D040947 ORTHO05D049725 9.6e-06 54.7 199 28.1


User provided reference genes

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