Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0201451 Lupinus albus HOM05D000306 ORTHO05D000410 2.4e-65 251.9 119 100.0
Lalb_Chr13g0297941 Lupinus albus HOM05D000306 ORTHO05D000410 5.3e-52 207.6 116 83.6
Ca_21895_v3 Cicer arietinum L. HOM05D000306 ORTHO05D000410 5.4e-41 171.0 115 69.6
Glyma.17G092700 Glycine max HOM05D000306 ORTHO05D000410 4.6e-40 167.9 113 74.3
Phvul.003G197500 Phaseolus vulgaris HOM05D000306 ORTHO05D000410 1.5e-38 162.9 113 70.8
Glyma.05G034600 Glycine max HOM05D000306 ORTHO05D000410 1.9e-38 162.5 113 71.7
TPR.G37569 Trifolium pratense HOM05D000306 ORTHO05D000410 4.3e-38 161.4 114 67.5
Psat4g056120 Pisum sativum HOM05D000306 ORTHO05D000410 5.6e-38 161.0 114 66.7
Lj4g0015244 Lotus japonicus HOM05D000306 ORTHO05D000410 2.8e-37 158.7 114 69.3
Medtr4g106810 Medicago truncatula HOM05D000306 ORTHO05D000410 4.0e-36 154.8 114 64.9
VMungo1215G1533 Vigna mungo HOM05D000306 ORTHO05D000410 1.4e-33 146.4 113 65.5
Atru.chr9.2413_Atru.chr9.2414 Acer truncatum HOM05D000306 ORTHO05D000410 3.9e-31 138.3 117 57.3
Potri.012G077000 Populus trichocarpa HOM05D000306 ORTHO05D000410 3.9e-31 138.3 122 57.4
Potri.015G071800 Populus trichocarpa HOM05D000306 ORTHO05D000410 3.9e-31 138.3 117 59.8
FvH4_5g16470 Fragaria vesca HOM05D000306 ORTHO05D000410 6.7e-31 137.5 125 55.2
RcHm_v2.0_Chr7g0179621 Rosa chinensis HOM05D000306 ORTHO05D000410 6.7e-31 137.5 125 56.0
FAN13G1688 Fragaria x ananassa HOM05D000306 ORTHO05D000410 1.1e-30 136.7 125 54.4
FAN04G3002 Fragaria x ananassa HOM05D000306 ORTHO05D000410 1.9e-30 136.0 125 54.4
arahy.Tifrunner.gnm1.ann1.13F19V Arachis hypogaea HOM05D000306 ORTHO05D000410 2.5e-30 135.6 115 61.7
arahy.Tifrunner.gnm1.ann1.SYM6HI Arachis hypogaea HOM05D000306 ORTHO05D000410 2.5e-30 135.6 115 61.7
Sabra12G0055100 Salix brachista HOM05D000306 ORTHO05D000410 3.3e-30 135.2 122 55.7
Sabra15G0096700 Salix brachista HOM05D000306 ORTHO05D000410 3.3e-30 135.2 122 55.7
CANSAT80G1526 Cannabis sativa HOM05D000306 ORTHO05D000410 7.4e-30 134.0 119 53.8
CiPaw.12G023600 Carya illinoinensis HOM05D000306 ORTHO05D000410 7.4e-30 134.0 117 59.0
Manes.14G069700 Manihot esculenta HOM05D000306 ORTHO05D000410 1.3e-29 133.3 119 56.3
Ciclev10019512m.g Citrus clementina HOM05D000306 ORTHO05D000410 2.1e-29 132.5 117 58.1
FAN08G1052 Fragaria x ananassa HOM05D000306 ORTHO05D000410 2.1e-29 132.5 125 53.6
Thecc.03G005500 Theobroma cacao HOM05D000306 ORTHO05D000410 2.1e-29 132.5 119 55.5
CiPaw.11G030800 Carya illinoinensis HOM05D000306 ORTHO05D000410 3.7e-29 131.7 113 55.8
Duzib205G1531 Durio zibethinus HOM05D000306 ORTHO05D000410 6.2e-29 131.0 119 57.1
MD06G1180400 Malus domestica HOM05D000306 ORTHO05D000410 1.1e-28 130.2 119 54.6
Cfa019075 Carpinus fangiana HOM05D000306 ORTHO05D000410 1.4e-28 129.8 121 53.7
PGR044G1217 Punica granatum HOM05D000306 ORTHO05D000410 5.3e-28 127.9 120 51.7
Haze_07445 Corylus avellana HOM05D000306 ORTHO05D000410 1.3e-26 123.2 122 51.6
Manes.06G101400 Manihot esculenta HOM05D000306 ORTHO05D000410 1.3e-26 123.2 115 55.7
Eucgr.K02876 Eucalyptus grandis HOM05D000306 ORTHO05D000410 3.8e-26 121.7 123 50.4
COL.COLO4_04327 Corchorus olitorius HOM05D000306 ORTHO05D000410 5.0e-26 121.3 120 52.5
Cpa.g.sc110.20 Carica papaya HOM05D000306 ORTHO05D000410 6.5e-26 120.9 112 50.9
Duzib068G1038 Durio zibethinus HOM05D000306 ORTHO05D000410 6.5e-26 120.9 118 53.4
Duzib084G0932 Durio zibethinus HOM05D000306 ORTHO05D000410 8.4e-26 120.6 116 53.4
Gohir.D03G104100 Gossypium hirsutum HOM05D000306 ORTHO05D000410 2.5e-25 119.0 119 52.9
Gorai.003G109800 Gossypium raimondii HOM05D000306 ORTHO05D000410 2.5e-25 119.0 119 52.9
TWI81G0031 Tripterygium wilfordii HOM05D000306 ORTHO05D000410 2.5e-25 119.0 116 53.4
Gohir.A03G061900 Gossypium hirsutum HOM05D000306 ORTHO05D000410 3.2e-25 118.6 119 52.1
Gohir.A12G276380 Gossypium hirsutum HOM05D000306 ORTHO05D000410 6.7e-23 110.9 119 47.9
Gohir.D12G277300 Gossypium hirsutum HOM05D000306 ORTHO05D000410 1.1e-22 110.2 119 47.1
Gorai.008G297800 Gossypium raimondii HOM05D000306 ORTHO05D000410 1.1e-22 110.2 119 47.1
Lj9C453T2 Lonicera japonica HOM05D000306 ORTHO05D000410 1.5e-22 109.8 111 47.7
MD14G1185500 Malus domestica HOM05D000306 ORTHO05D000410 3.3e-22 108.6 115 47.8
TWI60G0713 Tripterygium wilfordii HOM05D000306 ORTHO05D000410 3.3e-22 108.6 116 52.6
QL10p012493 Quercus lobata HOM05D000306 ORTHO05D000410 1.1e-20 103.6 121 47.9
Actinidia19082 Actinidia chinensis HOM05D000306 ORTHO05D000410 3.1e-20 102.1 118 43.2
Actinidia34956 Actinidia chinensis HOM05D000306 ORTHO05D000410 5.3e-20 101.3 118 42.4
Sopen03g032970 Solanum pennellii HOM05D000306 ORTHO05D000410 9.0e-20 100.5 123 45.5
Solyc03g113920.4 Solanum lycopersicum HOM05D000306 ORTHO05D000410 1.2e-19 100.1 123 45.5
Rhsim08G0168400 Rhododendron simsii HOM05D000306 ORTHO05D000410 3.4e-19 98.6 112 44.6
Peaxi162Scf00017g00248 Petunia axillaris HOM05D000306 ORTHO05D000410 5.9e-19 97.8 122 43.4
PGSC0003DMG400024475 Solanum tuberosum HOM05D000306 ORTHO05D000410 5.9e-19 97.8 123 43.9
Nitab4.5_0013311g0010 Nicotiana tabacum HOM05D000306 ORTHO05D000410 1.3e-18 96.7 121 42.1
Nitab4.5_0000026g0440 Nicotiana tabacum HOM05D000306 ORTHO05D000410 6.5e-18 94.4 116 38.8
CSS0003018 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 8.5e-18 94.0 114 43.9
CSS0015029 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 8.5e-18 94.0 114 43.9
vmacro16591 Vaccinium macrocarpon HOM05D000306 ORTHO05D000410 1.1e-17 93.6 113 39.8
Lj5A121G95 Lonicera japonica HOM05D000306 ORTHO05D000410 1.9e-17 92.8 96 52.1
Nitab4.5_0001286g0040 Nicotiana tabacum HOM05D000306 ORTHO05D000410 2.5e-17 92.4 121 40.5
Dinv09175 Davidia involucrata HOM05D000306 ORTHO05D000410 4.2e-17 91.7 114 41.2
Cc04_g13430 Coffea canephora HOM05D000306 ORTHO05D000410 2.7e-16 89.0 111 36.9
vmacro19359 Vaccinium macrocarpon HOM05D000306 ORTHO05D000410 3.6e-16 88.6 114 39.5
CAN.G853.7 Capsicum annuum HOM05D000306 ORTHO05D000410 1.4e-15 86.7 122 40.2
Sc12g0005570 Simmondsia chinensis HOM05D000306 ORTHO05D000410 2.3e-15 85.9 120 40.0
Rhsim12G0162100 Rhododendron simsii HOM05D000306 ORTHO05D000410 1.1e-14 83.6 113 35.4
Ah.11g046150 Amaranthus hybridus HOM05D000306 ORTHO05D000410 1.5e-14 83.2 125 35.2
MSTRG.11422 Avicennia marina HOM05D000306 ORTHO05D000410 2.0e-14 82.8 119 40.3
CSS0006526 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 5.7e-14 81.3 114 37.7
PGR083G0033 Punica granatum HOM05D000306 ORTHO05D000410 7.4e-14 80.9 112 42.0
Nitab4.5_0001887g0040 Nicotiana tabacum HOM05D000306 ORTHO05D000410 1.7e-13 79.7 112 37.5
DCAR_026115 Daucus carota HOM05D000306 ORTHO05D000410 1.1e-12 77.0 116 36.2
Rhsim08G0168500 Rhododendron simsii HOM05D000306 ORTHO05D000410 1.4e-12 76.6 99 41.4
Lsat_1_v5_gn_4_73301 Lactuca sativa HOM05D000306 ORTHO05D000410 1.5e-11 73.2 118 35.6
CsaV3_1G001770 Cucumis sativus L. HOM05D000306 ORTHO05D000410 2.0e-11 72.8 111 36.9
Dinv20693 Davidia involucrata HOM05D000306 ORTHO05D000410 2.0e-11 72.8 103 39.8
DCAR_016504 Daucus carota HOM05D000306 ORTHO05D000410 3.4e-11 72.0 115 36.5
Migut.D01792 Erythranthe guttata HOM05D000306 ORTHO05D000410 1.9e-09 66.2 108 39.8
ECA232G1293 Erigeron canadensis HOM05D000306 ORTHO05D000410 2.5e-09 65.9 120 34.2
Haze_01071 Corylus avellana HOM05D000660 ORTHO05D003823 3.2e-09 65.5 95 42.1
CSS0001473 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 4.2e-09 65.1 110 30.9
CSS0031501 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 4.2e-09 65.1 110 30.9
Cc04_g13390 Coffea canephora HOM05D000306 ORTHO05D000410 4.2e-09 65.1 111 29.7
MSTRG.4384 Avicennia marina HOM05D000306 ORTHO05D000410 7.9e-08 60.8 119 35.3
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 1.8e-07 59.7 112 28.6
HanXRQChr09g0271761 Helianthus annuus HOM05D000306 ORTHO05D000410 6.7e-07 57.8 120 30.0
Actinidia33045 Actinidia chinensis HOM05D000306 ORTHO05D000410 7.4e-06 54.3 103 34.0


User provided reference genes

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