Gene: Solyc03g113920.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc03g113920.4
- Transcript Identifier Solyc03g113920.4.1
- Gene Type Coding gene
- Location SL4.0ch03 : 58392827-58398326 : positive
Gene Family Information
- ID HOM05D000306
- #Genes/#Species 1483/99
- Phylogenetic origin
- ID ORTHO05D000410
- #Genes/#Species 969/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc03g113920.4.1
- uniprot A0A3Q7FS99
- gene_id Solyc03g113920
Descriptions
- Description Calmodulin binding protein (AHRD V3.3 *** A0A2K3MP79_TRIPR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0080142 | IBA | GOA Database | regulation of salicylic acid biosynthetic process | |
| GO:1900425 | ISO | PLAZA Integrative Orthology | negative regulation of defense response to bacterium | AT5G62570 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005516 | IEA | GOA Database | calmodulin binding | |
| GO:0005516 | IEA | InterPro | calmodulin binding | |
| GO:0043565 | IBA | GOA Database | sequence-specific DNA binding | |
| GO:0003700 | IBA | GOA Database | DNA-binding transcription factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012416 | CALMODULIN-BINDING PROTEIN60 |
| Mapman id | Description |
|---|---|
| 26.9.3.1.4 | External stimuli response.pathogen.defense mechanisms.systemic acquired resistance (SAR).regulatory protein (CBP60/SARD) |