Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0201111 Lupinus albus HOM05D004772 ORTHO05D020841 2.4e-96 355.5 186 100.0
Lalb_Chr13g0298261 Lupinus albus HOM05D004772 ORTHO05D006892 1.2e-39 167.2 151 66.2
Glyma.17G029600 Glycine max HOM05D004772 ORTHO05D006892 4.0e-38 162.2 151 62.9
Phvul.003G108600 Phaseolus vulgaris HOM05D004772 ORTHO05D006892 5.2e-38 161.8 151 62.3
VMungo1215G3292 Vigna mungo HOM05D004772 ORTHO05D006892 2.0e-37 159.8 151 61.6
Glyma.07G244300 Glycine max HOM05D004772 ORTHO05D006892 3.3e-37 159.1 151 61.6
arahy.Tifrunner.gnm1.ann1.0U01EG Arachis hypogaea HOM05D004772 ORTHO05D006892 9.7e-37 157.5 146 63.7
Medtr4g120470 Medicago truncatula HOM05D004772 ORTHO05D006892 3.7e-36 155.6 146 63.0
Ca_21472_v3 Cicer arietinum L. HOM05D004772 ORTHO05D006892 1.1e-35 154.1 146 61.0
Lj4g0015807 Lotus japonicus HOM05D004772 ORTHO05D006892 3.1e-35 152.5 157 59.2
Psat4g024680 Pisum sativum HOM05D004772 ORTHO05D006892 1.2e-34 150.6 146 60.3
TPR.G22770 Trifolium pratense HOM05D004772 ORTHO05D006892 1.0e-33 147.5 146 61.0
Manes.03G200000 Manihot esculenta HOM05D004772 ORTHO05D006892 1.4e-30 137.1 154 52.6
Dinv29709 Davidia involucrata HOM05D004772 ORTHO05D006892 2.3e-30 136.3 151 55.0
Sabra10G0004800 Salix brachista HOM05D004772 ORTHO05D006892 5.2e-30 135.2 153 53.6
TAR362G0678 Trochodendron aralioides HOM05D004772 ORTHO05D006892 1.2e-29 134.0 146 54.8
Potri.010G005600 Populus trichocarpa HOM05D004772 ORTHO05D006892 2.0e-29 133.3 146 55.5
Potri.008G211400 Populus trichocarpa HOM05D004772 ORTHO05D006892 5.7e-29 131.7 146 54.1
GSVIVG01035090001 Vitis vinifera HOM05D004772 ORTHO05D006892 5.7e-29 131.7 151 53.0
Cfa015449 Carpinus fangiana HOM05D004772 ORTHO05D006892 7.5e-29 131.3 153 53.6
Duzib151G1106 Durio zibethinus HOM05D004772 ORTHO05D006892 9.8e-29 131.0 146 54.8
Thecc.04G291000 Theobroma cacao HOM05D004772 ORTHO05D006892 1.7e-28 130.2 146 54.8
Nn3g21575 Nelumbo nucifera HOM05D004772 ORTHO05D006892 2.2e-28 129.8 151 53.0
Haze_01138 Corylus avellana HOM05D004772 ORTHO05D006892 8.3e-28 127.9 145 53.8
Haze_01142 Corylus avellana HOM05D004772 ORTHO05D006892 8.3e-28 127.9 145 53.8
Hma1.2p1_0078F.1_g040270 Hydrangea macrophylla HOM05D004772 ORTHO05D006892 8.3e-28 127.9 151 51.7
Hma1.2p1_0078F.1_g040280 Hydrangea macrophylla HOM05D004772 ORTHO05D006892 8.3e-28 127.9 151 51.7
CiPaw.02G079000 Carya illinoinensis HOM05D004772 ORTHO05D006892 1.1e-27 127.5 151 52.3
Eucgr.E01101 Eucalyptus grandis HOM05D004772 ORTHO05D006892 1.1e-27 127.5 146 52.7
THA.LOC104802592 Tarenaya hassleriana HOM05D004772 ORTHO05D006892 1.1e-27 127.5 151 47.7
TWI09G0846 Tripterygium wilfordii HOM05D004772 ORTHO05D006892 1.1e-27 127.5 146 52.1
Sed0023608 Sechium edule HOM05D004772 ORTHO05D006892 1.4e-27 127.1 146 51.4
Gohir.A09G063500 Gossypium hirsutum HOM05D004772 ORTHO05D006892 1.8e-27 126.7 146 52.7
MD16G1162000 Malus domestica HOM05D004772 ORTHO05D006892 1.8e-27 126.7 146 50.7
Aqoxy5G00804 Aquilegia oxysepala HOM05D004772 ORTHO05D006892 2.4e-27 126.3 146 52.1
DCAR_027042 Daucus carota HOM05D004772 ORTHO05D006892 3.1e-27 125.9 146 50.7
TWI73G1272 Tripterygium wilfordii HOM05D004772 ORTHO05D006892 3.1e-27 125.9 146 51.4
PSO731G0023 Papaver somniferum HOM05D004772 ORTHO05D006892 4.1e-27 125.6 151 51.7
PSO764G0237 Papaver somniferum HOM05D004772 ORTHO05D006892 4.1e-27 125.6 151 51.7
Gohir.D09G062400 Gossypium hirsutum HOM05D004772 ORTHO05D006892 5.4e-27 125.2 146 51.4
Gorai.006G077200 Gossypium raimondii HOM05D004772 ORTHO05D006892 5.4e-27 125.2 146 51.4
Lsat_1_v5_gn_6_76160 Lactuca sativa HOM05D004772 ORTHO05D006892 5.4e-27 125.2 151 49.0
FvH4_4g18900 Fragaria vesca HOM05D004772 ORTHO05D006892 9.1e-27 124.4 146 50.7
FAN07G2363 Fragaria x ananassa HOM05D004772 ORTHO05D006892 9.1e-27 124.4 146 50.7
FAN12G2191 Fragaria x ananassa HOM05D004772 ORTHO05D006892 9.1e-27 124.4 146 50.7
FAN12G3151 Fragaria x ananassa HOM05D004772 ORTHO05D006892 9.1e-27 124.4 146 50.7
HanXRQChr03g0085471 Helianthus annuus HOM05D004772 ORTHO05D006892 9.1e-27 124.4 151 47.0
MD13G1162200 Malus domestica HOM05D004772 ORTHO05D006892 1.2e-26 124.0 146 49.3
MELO3C021296.2 Cucumis melo HOM05D004772 ORTHO05D006892 1.6e-26 123.6 146 50.0
CsaV3_6G022660 Cucumis sativus L. HOM05D004772 ORTHO05D006892 2.0e-26 123.2 146 50.0
Oeu054008.1 Olea europaea HOM05D004772 ORTHO05D006892 2.7e-26 122.9 151 49.0
RcHm_v2.0_Chr4g0423801 Rosa chinensis HOM05D004772 ORTHO05D006892 2.7e-26 122.9 146 50.0
Hund11943 Selenicereus undatus HOM05D004772 ORTHO05D006892 3.5e-26 122.5 146 51.4
CSS0008369 Camellia sinensis var. sinensis HOM05D004772 ORTHO05D006892 4.5e-26 122.1 151 47.7
QL06p010892 Quercus lobata HOM05D004772 ORTHO05D006892 4.5e-26 122.1 146 52.1
SHI00201 Sapria himalayana HOM05D004772 ORTHO05D006892 5.9e-26 121.7 145 49.0
Prupe.1G129500 Prunus persica HOM05D004772 ORTHO05D006892 7.7e-26 121.3 146 49.3
MSTRG.24809 Avicennia marina HOM05D004772 ORTHO05D006892 1.0e-25 120.9 146 47.3
CANSAT78G1075 Cannabis sativa HOM05D004772 ORTHO05D006892 1.0e-25 120.9 145 51.0
AUR62035077 Chenopodium quinoa HOM05D004772 ORTHO05D006892 1.0e-25 120.9 151 48.3
Lj6A683G52 Lonicera japonica HOM05D004772 ORTHO05D006892 1.3e-25 120.6 151 48.3
AUR62016163 Chenopodium quinoa HOM05D004772 ORTHO05D006892 1.7e-25 120.2 151 49.0
Cpa.g.sc9.115 Carica papaya HOM05D004772 ORTHO05D006892 2.3e-25 119.8 146 49.3
Cc03_g01340 Coffea canephora HOM05D004772 ORTHO05D006892 2.3e-25 119.8 146 48.6
ECA240G4356 Erigeron canadensis HOM05D004772 ORTHO05D006892 2.3e-25 119.8 151 45.7
Actinidia18636 Actinidia chinensis HOM05D004772 ORTHO05D006892 3.8e-25 119.0 151 47.7
ClCG06G004870 Citrullus lanatus HOM05D004772 ORTHO05D006892 6.6e-25 118.2 169 45.6
EL10Ac3g04940 Beta vulgaris HOM05D004772 ORTHO05D006892 8.6e-25 117.9 151 48.3
Sc19g0003370 Simmondsia chinensis HOM05D004772 ORTHO05D006892 8.6e-25 117.9 151 47.0
Aa31LG8G3880 Aethionema arabicum HOM05D004772 ORTHO05D006892 1.5e-24 117.1 146 44.5
SGA_v2.0_scaffold119G32697 Striga asiatica HOM05D004772 ORTHO05D006892 2.5e-24 116.3 146 45.2
PGSC0003DMG400001190 Solanum tuberosum HOM05D004772 ORTHO05D006892 3.3e-24 115.9 146 49.3
Solyc01g065580.4 Solanum lycopersicum HOM05D004772 ORTHO05D006892 4.2e-24 115.5 146 49.3
Sopen01g026980 Solanum pennellii HOM05D004772 ORTHO05D006892 4.2e-24 115.5 146 49.3
PGR004G0606 Punica granatum HOM05D004772 ORTHO05D006892 9.5e-24 114.4 145 50.3
Rhsim04G0228200 Rhododendron simsii HOM05D004772 ORTHO05D006892 9.5e-24 114.4 151 47.0
Peaxi162Scf00065g01018 Petunia axillaris HOM05D004772 ORTHO05D006892 1.2e-23 114.0 145 46.9
CAN.G14.7 Capsicum annuum HOM05D004772 ORTHO05D006892 1.6e-23 113.6 146 47.9
Migut.N00065 Erythranthe guttata HOM05D004772 ORTHO05D006892 2.1e-23 113.2 146 45.9
CAN.G1132.3 Capsicum annuum HOM05D004772 ORTHO05D006892 2.8e-23 112.8 146 47.9
vmacro08098 Vaccinium macrocarpon HOM05D004772 ORTHO05D006892 2.8e-23 112.8 151 47.0
SalBow5G3355 Salvia bowleyana HOM05D004772 ORTHO05D006892 3.6e-23 112.5 151 43.7
Ciclev10004585m.g Citrus clementina HOM05D004772 ORTHO05D006892 4.7e-23 112.1 89 68.5
ATR0693G185 Amborella trichopoda HOM05D004772 ORTHO05D006892 6.1e-23 111.7 184 42.4
Thhalv10020259m.g Eutrema salsugineum HOM05D004772 ORTHO05D006892 8.0e-23 111.3 146 43.2
Nitab4.5_0000361g0050 Nicotiana tabacum HOM05D004772 ORTHO05D006892 1.8e-22 110.2 146 47.3
Nitab4.5_0007304g0010 Nicotiana tabacum HOM05D004772 ORTHO05D006892 3.0e-22 109.4 146 47.3
BcaB06g25777 Brassica carinata HOM05D004772 ORTHO05D006892 4.0e-22 109.0 151 41.7
MBI18_g04559_MAGBIO Magnolia biondii HOM05D004772 ORTHO05D006892 6.8e-22 108.2 90 65.6
BcaC05g28847 Brassica carinata HOM05D004772 ORTHO05D006892 8.9e-22 107.8 150 41.3
A05p32820 Brassica napus HOM05D004772 ORTHO05D006892 8.9e-22 107.8 150 41.3
C05p49530 Brassica napus HOM05D004772 ORTHO05D006892 8.9e-22 107.8 150 41.3
BolC5t33706H Brassica oleracea HOM05D004772 ORTHO05D006892 8.9e-22 107.8 150 41.3
BraA05t22104Z Brassica rapa HOM05D004772 ORTHO05D006892 8.9e-22 107.8 150 41.3
CARHR092060 Cardamine hirsuta HOM05D004772 ORTHO05D006892 3.4e-21 105.9 146 41.1
Sp3g15060 Schrenkiella parvula HOM05D004772 ORTHO05D006892 9.8e-21 104.4 151 41.1
Pp3c5_10580 Physcomitrium patens HOM05D004772 ORTHO05D006892 2.2e-20 103.2 139 44.6
SMO367G0742 Selaginella moellendorffii HOM05D004772 ORTHO05D006892 3.7e-20 102.4 132 47.7
CBR_g50950 Chara braunii HOM05D004772 ORTHO05D006892 8.3e-20 101.3 151 40.4
AT3G16810 Arabidopsis thaliana HOM05D004772 ORTHO05D006892 1.4e-19 100.5 145 40.0
AL3G29730 Arabidopsis lyrata HOM05D004772 ORTHO05D006892 1.8e-19 100.1 145 39.3
AagrBONN_evm.TU.Sc2ySwM_344.4680 Anthoceros agrestis HOM05D004772 ORTHO05D006892 3.1e-19 99.4 151 39.7
CSS0024712 Camellia sinensis var. sinensis HOM05D004772 ORTHO05D006892 2.0e-18 96.7 141 43.3
Carub.0003s1652 Capsella rubella HOM05D004772 ORTHO05D006892 4.5e-18 95.5 145 39.3
AUR62015585 Chenopodium quinoa HOM05D004772 ORTHO05D006892 5.9e-18 95.1 84 61.9
SEGI_16207 Sequoiadendron giganteum HOM05D004772 ORTHO05D006892 1.7e-17 93.6 127 44.1
Psat5g033800 Pisum sativum HOM05D004772 ORTHO05D006892 8.6e-17 91.3 78 70.5
Os03g0831100 Oryza sativa ssp. japonica HOM05D004772 ORTHO05D006892 4.7e-15 85.5 151 39.1
CDE02G0409 Ceratophyllum demersum HOM05D004772 ORTHO05D006892 1.8e-14 83.6 83 55.4
HPP92_010664 Vanilla planifolia HOM05D004772 ORTHO05D006892 3.1e-14 82.8 149 36.9
Mapoly0099s0044 Marchantia polymorpha HOM05D004772 ORTHO05D006892 4.9e-12 75.5 154 35.1
unitig_747.g21102 Utricularia gibba HOM05D004772 ORTHO05D006892 8.3e-12 74.7 136 36.8
CDE09G0311 Ceratophyllum demersum HOM05D004772 ORTHO05D006892 7.8e-10 68.2 54 64.8
COL.COLO4_34697 Corchorus olitorius HOM05D004772 ORTHO05D006892 3.0e-09 66.2 155 34.8
Zm00001eb103920 Zea mays HOM05D004772 ORTHO05D020841 5.0e-09 65.5 137 34.3
Zm00001eb063600 Zea mays HOM05D004772 ORTHO05D006892 6.6e-09 65.1 130 34.6
Zm00001eb103930 Zea mays HOM05D004772 ORTHO05D020841 1.1e-08 64.3 136 33.1
Zm00001eb160280 Zea mays HOM05D004772 ORTHO05D020841 1.1e-08 64.3 136 33.1
Zm00001eb246110 Zea mays HOM05D004772 ORTHO05D020841 1.1e-08 64.3 136 33.1
Zm00001eb258700 Zea mays HOM05D004772 ORTHO05D020841 1.1e-08 64.3 136 33.1
Zm00001eb355950 Zea mays HOM05D004772 ORTHO05D020841 2.5e-08 63.2 136 32.4


User provided reference genes

Program Settings