Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 6.5e-218 760.4 370 100.0
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 1.4e-204 716.1 370 93.2
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 2.4e-196 688.7 370 89.5
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.7e-194 682.6 370 88.4
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 1.7e-194 682.6 370 88.9
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 1.2e-192 676.4 370 87.0
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 6.2e-192 674.1 370 88.4
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 8.0e-192 673.7 370 88.1
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.5e-190 669.5 409 80.9
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 8.3e-189 663.7 370 86.5
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.9e-188 662.5 370 85.7
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.2e-188 661.8 370 86.5
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 4.1e-188 661.4 370 85.4
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 2.7e-187 658.7 370 85.9
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.3e-186 656.4 370 85.4
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 2.3e-186 655.6 371 85.2
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 1.5e-185 652.9 370 84.6
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 4.3e-185 651.4 370 84.3
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.2e-184 649.8 370 84.9
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 2.1e-184 649.0 370 85.1
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 2.1e-184 649.0 370 85.1
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.8e-184 648.7 370 83.8
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 4.7e-184 647.9 370 83.5
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 8.1e-184 647.1 359 86.1
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 1.1e-183 646.7 370 84.3
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.8e-183 646.0 366 85.2
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.8e-183 646.0 370 83.2
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 3.1e-183 645.2 370 84.6
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 3.1e-183 645.2 370 84.6
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.0e-183 644.8 370 83.0
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 6.8e-183 644.0 370 84.3
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.2e-182 643.3 371 84.1
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 1.5e-182 642.9 377 83.8
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.6e-182 642.1 370 84.1
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 2.6e-182 642.1 370 84.1
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 3.4e-182 641.7 386 81.6
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 9.9e-182 640.2 370 83.5
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.2e-181 639.0 371 83.3
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 2.9e-181 638.6 371 83.3
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 2.9e-181 638.6 370 83.2
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.1e-180 636.7 366 83.6
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 1.4e-180 636.3 370 82.2
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 3.2e-180 635.2 371 82.5
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 4.1e-180 634.8 366 83.6
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 7.1e-180 634.0 366 84.2
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 9.2e-180 633.6 371 82.7
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 9.2e-180 633.6 371 82.7
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 1.6e-179 632.9 361 84.5
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 2.1e-179 632.5 370 82.4
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.7e-179 632.1 370 81.9
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 3.5e-179 631.7 370 83.5
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 4.6e-179 631.3 371 81.9
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 6.0e-179 630.9 370 83.0
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 7.8e-179 630.6 371 82.5
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 1.0e-178 630.2 370 81.6
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.0e-178 630.2 371 81.9
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.3e-178 629.0 371 80.9
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.3e-178 629.0 371 82.2
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 3.0e-178 628.6 371 81.4
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 5.1e-178 627.9 370 81.6
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 3.3e-177 625.2 370 81.4
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 3.3e-177 625.2 372 82.3
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 4.3e-177 624.8 371 82.5
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 4.3e-177 624.8 368 82.6
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 7.3e-177 624.0 351 85.2
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 9.6e-177 623.6 371 82.2
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.2e-176 623.2 373 80.7
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 1.6e-176 622.9 371 81.7
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 1.6e-176 622.9 371 82.2
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.1e-176 622.5 369 82.1
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 2.8e-176 622.1 373 80.7
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 6.2e-176 620.9 372 81.7
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 6.2e-176 620.9 373 80.4
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 8.1e-176 620.5 371 80.9
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.8e-175 619.4 370 81.1
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 5.2e-175 617.8 373 81.2
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 5.2e-175 617.8 371 80.1
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 6.8e-175 617.5 370 80.8
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 1.5e-174 616.3 371 80.9
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.0e-174 615.9 370 80.5
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 2.0e-174 615.9 370 78.9
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 3.4e-174 615.1 371 80.9
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 3.4e-174 615.1 397 76.6
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 5.8e-174 614.4 370 81.6
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 9.9e-174 613.6 370 80.3
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 1.3e-173 613.2 373 80.2
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 8.4e-173 610.5 384 78.6
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 8.4e-173 610.5 369 79.4
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.9e-172 609.4 367 80.4
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.9e-172 609.4 371 79.0
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 9.2e-172 607.1 374 78.6
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 9.2e-172 607.1 356 81.7
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.2e-171 606.7 370 79.7
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 2.7e-171 605.5 402 75.6
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 3.5e-171 605.1 358 83.2
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.0e-170 603.6 373 79.6
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.3e-170 603.2 362 79.8
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 5.1e-170 601.3 363 79.3
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 5.1e-170 601.3 363 79.3
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 5.1e-170 601.3 363 79.3
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 5.1e-170 601.3 363 79.3
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 5.1e-170 601.3 363 79.3
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.5e-169 599.0 369 79.7
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 2.8e-168 595.5 350 82.0
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 8.1e-168 594.0 372 78.8
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.8e-167 592.8 351 81.5
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 1.8e-167 592.8 365 79.5
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 5.3e-167 591.3 369 78.3
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 6.9e-167 590.9 369 77.8
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 1.7e-165 586.3 370 76.8
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 2.4e-164 582.4 368 78.0
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.7e-163 578.9 370 78.4
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.7e-163 578.9 370 76.8
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 2.3e-162 575.9 370 75.9
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.3e-162 575.9 370 75.9
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 6.6e-162 574.3 368 77.4
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 1.9e-161 572.8 360 78.9
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 7.3e-161 570.9 369 75.9
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.3e-160 570.1 371 75.2
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 2.1e-160 569.3 368 72.6
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 3.6e-160 568.5 433 67.2
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 4.8e-160 568.2 368 76.6
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 6.2e-160 567.8 368 72.6
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 1.8e-159 566.2 370 74.9
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 2.4e-159 565.8 365 75.6
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.5e-158 563.1 351 78.6
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 3.4e-158 562.0 371 74.9
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 7.6e-158 560.8 371 74.9
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 2.4e-156 555.8 367 73.3
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 2.4e-156 555.8 360 74.7
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 1.3e-154 550.1 367 72.8
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 3.9e-154 548.5 367 73.8
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 9.6e-153 543.9 371 72.8
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 2.4e-151 539.3 366 71.6
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 7.6e-150 534.3 373 71.6
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 5.5e-148 528.1 377 70.3
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 2.7e-147 525.8 397 69.3
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.0e-146 523.9 363 70.8
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 8.7e-146 520.8 361 69.0
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 8.7e-146 520.8 370 65.7
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 9.6e-145 517.3 370 66.2
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 6.2e-144 514.6 371 66.6
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 9.0e-143 510.8 372 64.5
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 7.6e-142 507.7 369 65.6
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 1.3e-138 496.9 368 65.2
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 4.8e-136 488.4 288 81.9
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 1.8e-135 486.5 371 63.6
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 3.1e-135 485.7 325 73.5
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.3e-130 469.5 283 80.2
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.1e-129 467.2 279 80.6
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 5.7e-129 464.9 348 69.3
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.3e-128 463.8 365 63.3
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 2.8e-128 462.6 277 81.6
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.8e-128 462.6 281 80.4
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.6e-126 456.1 280 78.2
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 4.5e-126 455.3 358 63.1
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 4.7e-123 445.3 327 68.8
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.4e-122 443.7 278 78.1
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 4.4e-121 438.7 275 79.3
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 2.8e-120 436.0 388 56.2
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 1.2e-115 420.6 239 84.1
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.3e-113 412.5 366 53.6
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 4.8e-112 408.7 274 71.9
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 1.2e-110 404.1 402 52.5
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 5.5e-108 395.2 275 69.5
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 3.0e-106 389.4 360 54.4
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 3.4e-89 332.8 200 81.0
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.9e-88 329.7 198 81.3
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 2.7e-86 323.2 273 62.6
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.6e-86 322.4 197 77.2
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 6.6e-85 318.5 177 85.9
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 3.2e-71 273.1 171 78.9
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 4.6e-54 216.1 266 50.4
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 4.2e-47 193.0 360 32.5
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 7.9e-46 188.7 113 82.3
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 4.3e-44 183.0 437 28.8
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 4.9e-40 169.5 397 25.7
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 8.4e-40 168.7 120 68.3
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 4.2e-39 166.4 148 60.8
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 2.1e-38 164.1 120 66.7
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 9.0e-34 148.7 297 30.6
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 1.9e-31 141.0 115 60.9
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 2.1e-27 127.5 84 70.2
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 2.0e-09 67.8 49 71.4
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 1.2e-06 58.5 68 47.1


User provided reference genes

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