Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0071071 Lupinus albus HOM05D004537 ORTHO05D005492 9.4e-74 280.0 134 100.0
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 1.3e-59 233.0 128 88.3
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 1.1e-58 229.9 128 87.5
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 3.2e-58 228.4 128 86.7
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 4.2e-58 228.0 128 86.7
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 4.2e-58 228.0 128 86.7
SHI26645 Sapria himalayana HOM05D004537 ORTHO05D005492 4.2e-58 228.0 128 86.7
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 7.2e-58 227.3 128 86.7
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 7.2e-58 227.3 128 86.7
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 7.2e-58 227.3 128 86.7
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.1e-57 225.7 136 83.1
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 6.1e-57 224.2 128 85.2
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 4.0e-56 221.5 128 85.2
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 1.2e-55 219.9 128 84.4
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 2.0e-55 219.2 128 85.2
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 2.0e-55 219.2 126 84.9
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 2.0e-55 219.2 128 82.8
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 7.5e-55 217.2 128 84.4
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 7.5e-55 217.2 136 80.9
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 3.1e-53 211.8 129 82.9
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 3.1e-53 211.8 128 81.2
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 3.6e-49 198.4 111 87.4
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 4.0e-48 194.9 110 86.4
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 2.0e-47 192.6 131 75.6
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 9.8e-47 190.3 97 93.8
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.7e-46 188.3 129 72.1
Medtr8g106255 Medicago truncatula HOM05D004537 ORTHO05D005492 6.3e-46 187.6 91 95.6
Migut.E01634 Erythranthe guttata HOM05D004537 ORTHO05D005492 2.0e-44 182.6 93 93.5
Migut.E00896 Erythranthe guttata HOM05D004537 ORTHO05D005492 1.3e-43 179.9 93 92.5
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 1.9e-42 176.0 103 84.5
COL.COLO4_04173 Corchorus olitorius HOM05D004537 ORTHO05D005492 4.4e-39 164.9 128 66.4
Glyma.03G094400 Glycine max HOM05D004537 ORTHO05D005492 1.3e-38 163.3 81 92.6
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 8.3e-38 160.6 251 41.4
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 3.5e-36 155.2 98 80.6
Nitab4.5_0000866g0210 Nicotiana tabacum HOM05D004537 ORTHO05D005492 5.9e-36 154.5 103 74.8
HanXRQChr04g0127221 Helianthus annuus HOM05D004537 ORTHO05D005492 1.7e-35 152.9 79 92.4
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 2.3e-35 152.5 97 81.4
Ah.01g011750 Amaranthus hybridus HOM05D004537 ORTHO05D005492 3.9e-35 151.8 94 81.9
CAN.G60.10 Capsicum annuum HOM05D004537 ORTHO05D005492 7.3e-34 147.5 99 74.7
Pp3c4_28940 Physcomitrium patens HOM05D004537 ORTHO05D005492 1.4e-32 143.3 93 78.5
Pp3c4_28946 Physcomitrium patens HOM05D004537 ORTHO05D005492 1.4e-32 143.3 93 78.5
SHI26666 Sapria himalayana HOM05D004537 ORTHO05D005492 6.4e-30 134.4 114 62.3
SHI27476 Sapria himalayana HOM05D004537 ORTHO05D005492 6.6e-27 124.4 79 77.2
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 3.3e-26 122.1 128 58.6
SMO053G0009 Selaginella moellendorffii HOM05D004537 ORTHO05D005492 1.2e-25 120.2 122 56.6
Haze_27145 Corylus avellana HOM05D004537 ORTHO05D005492 6.2e-25 117.9 110 58.2
CAN.G999.40 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-24 117.1 74 79.7
Haze_27101 Corylus avellana HOM05D004537 ORTHO05D005492 5.2e-24 114.8 127 45.7
Nitab4.5_0000019g0180 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.1e-21 107.1 115 53.0
SHI26667 Sapria himalayana HOM05D004537 ORTHO05D005492 2.4e-21 105.9 88 69.3
Mapoly0006s0021 Marchantia polymorpha HOM05D004537 ORTHO05D005492 1.6e-20 103.2 65 76.9
MELO3C021523.2 Cucumis melo HOM05D004537 ORTHO05D005492 1.0e-19 100.5 80 67.5
Ah.14g079610 Amaranthus hybridus HOM05D004537 ORTHO05D005492 3.9e-19 98.6 64 78.1
Psat0s12108g0080 Pisum sativum HOM05D004537 ORTHO05D005492 3.9e-19 98.6 64 78.1
unitig_87.g28000 Utricularia gibba HOM05D004537 ORTHO05D005492 3.9e-19 98.6 64 78.1
Medtr0024s0110 Medicago truncatula HOM05D004537 ORTHO05D005492 1.5e-18 96.7 51 84.3
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 5.6e-18 94.7 111 53.2
GSVIVG01020676001 Vitis vinifera HOM05D004537 ORTHO05D005492 9.5e-18 94.0 57 80.7
HanXRQChr08g0236111 Helianthus annuus HOM05D004537 ORTHO05D005492 2.1e-17 92.8 64 75.0
MD13G1127000 Malus domestica HOM05D004537 ORTHO05D005492 2.8e-17 92.4 112 54.5
Solyc08g029280.2 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.6e-17 92.0 111 50.5
ClCG09G001530 Citrullus lanatus HOM05D004537 ORTHO05D005492 5.8e-15 84.7 47 89.4
Nitab4.5_0000592g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.7e-14 83.2 76 60.5
SHI20134 Sapria himalayana HOM05D004537 ORTHO05D005492 1.7e-14 83.2 50 78.0
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 1.1e-13 80.5 39 94.9
Ah.03g142980 Amaranthus hybridus HOM05D001159 ORTHO05D005492 4.1e-13 78.6 44 84.1
Solyc02g021770.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.0e-11 73.9 43 76.7
ATR1125G006 Amborella trichopoda HOM05D004537 ORTHO05D005492 1.3e-11 73.6 78 55.1
SHI01747 Sapria himalayana HOM05D004537 ORTHO05D005492 1.3e-11 73.6 104 47.1
Haze_27411 Corylus avellana HOM05D004537 ORTHO05D005492 1.7e-11 73.2 79 53.2
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 5.1e-11 71.6 32 96.9
Nitab4.5_0004798g0040 Nicotiana tabacum HOM05D005259 ORTHO05D006402 5.6e-10 68.2 36 86.1
CAN.G416.37 Capsicum annuum HOM05D004537 ORTHO05D005492 4.0e-08 62.0 45 71.1
MELO3C027747.2 Cucumis melo HOM05D004537 ORTHO05D005492 4.0e-08 62.0 45 71.1
BraSC48t46324Z Brassica rapa HOM05D004537 ORTHO05D005492 1.3e-06 57.0 28 100.0


User provided reference genes

Program Settings