Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0070141 Lupinus albus HOM05D002864 ORTHO05D008485 2.3e-125 452.2 225 100.0
Lalb_Chr11g0070221 Lupinus albus HOM05D002864 ORTHO05D008485 2.3e-125 452.2 225 100.0
Lalb_Chr00c21g0405251 Lupinus albus HOM05D002864 ORTHO05D008485 4.4e-124 448.0 225 99.1
Lalb_Chr00c21g0405391 Lupinus albus HOM05D002864 ORTHO05D008485 4.4e-124 448.0 225 99.1
Lalb_Chr00c24g0407171 Lupinus albus HOM05D002864 ORTHO05D008485 4.4e-124 448.0 225 99.1
Lalb_Chr00c21g0405111 Lupinus albus HOM05D002864 ORTHO05D008485 7.2e-119 430.6 223 97.3
Lalb_Chr07g0190471 Lupinus albus HOM05D002864 ORTHO05D008485 1.4e-109 399.8 225 90.2
Lalb_Chr00c21g0405201 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-106 389.0 194 99.5
Psat0ss7220g0040 Pisum sativum HOM05D002864 ORTHO05D008485 6.4e-99 364.4 186 96.8
LjContig00315g0018050 Lotus japonicus HOM05D002864 ORTHO05D008485 8.3e-99 364.0 186 96.8
LjContig00439g0002067 Lotus japonicus HOM05D002864 ORTHO05D008485 8.3e-99 364.0 186 96.8
LjContig00446g0004288 Lotus japonicus HOM05D002864 ORTHO05D008485 8.3e-99 364.0 186 96.8
CANSAT16G0032 Cannabis sativa HOM05D002864 ORTHO05D008485 1.4e-98 363.2 186 96.8
CARHR288210 Cardamine hirsuta HOM05D002864 ORTHO05D008485 5.9e-97 357.8 186 94.6
A04p09410 Brassica napus HOM05D002864 ORTHO05D008485 1.3e-96 356.7 186 95.2
BolSC28t60372H Brassica oleracea HOM05D002864 ORTHO05D008485 1.3e-96 356.7 186 95.2
BraSC159t45731Z Brassica rapa HOM05D002864 ORTHO05D008485 1.3e-96 356.7 186 95.2
AT2G07725 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 1.7e-96 356.3 186 94.6
ATMG00210 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 1.7e-96 356.3 186 94.6
CARHR282720 Cardamine hirsuta HOM05D002864 ORTHO05D008485 1.7e-96 356.3 186 94.6
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 1.7e-96 356.3 184 95.1
Sed0011141 Sechium edule HOM05D002864 ORTHO05D008485 2.3e-96 355.9 186 95.2
Sed0025017 Sechium edule HOM05D002864 ORTHO05D008485 2.3e-96 355.9 186 95.2
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 3.3e-95 352.1 188 93.1
BraSC54t46369Z Brassica rapa HOM05D002864 ORTHO05D008485 5.6e-95 351.3 186 94.1
Nn1g09937 Nelumbo nucifera HOM05D002864 ORTHO05D008485 8.0e-94 347.4 187 93.6
Nn1g10176 Nelumbo nucifera HOM05D002864 ORTHO05D008485 8.0e-94 347.4 187 93.6
BolSC28t60317H Brassica oleracea HOM05D002864 ORTHO05D008485 3.1e-93 345.5 184 92.9
BraSC48t46332Z Brassica rapa HOM05D002864 ORTHO05D008485 6.8e-93 344.4 179 95.0
TAR371G0939 Trochodendron aralioides HOM05D002864 ORTHO05D008485 1.2e-92 343.6 189 91.5
arahy.Tifrunner.gnm1.ann1.ID22MY Arachis hypogaea HOM05D002864 ORTHO05D008485 2.6e-92 342.4 186 91.4
SHI26647 Sapria himalayana HOM05D002864 ORTHO05D008485 1.3e-91 340.1 183 90.7
CSS0047546 Camellia sinensis var. sinensis HOM05D002864 ORTHO05D008485 1.4e-90 336.7 188 92.0
Lj2A1230T121 Lonicera japonica HOM05D002864 ORTHO05D008485 9.2e-90 334.0 190 90.0
AUR62042335 Chenopodium quinoa HOM05D002864 ORTHO05D008485 1.7e-88 329.7 183 90.2
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 3.9e-88 328.6 186 89.2
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 3.9e-88 328.6 186 89.2
BraSC48t46241Z Brassica rapa HOM05D002864 ORTHO05D008485 6.6e-88 327.8 183 89.1
SalBow1G5070 Salvia bowleyana HOM05D002864 ORTHO05D008485 2.1e-86 322.8 185 89.2
PGR028G0017 Punica granatum HOM05D002864 ORTHO05D008485 2.8e-86 322.4 188 88.8
CAN.G366.9 Capsicum annuum HOM05D002864 ORTHO05D008485 1.8e-85 319.7 188 89.4
CAN.G537.1 Capsicum annuum HOM05D002864 ORTHO05D008485 1.8e-85 319.7 188 89.4
CAN.G539.3 Capsicum annuum HOM05D002864 ORTHO05D008485 1.8e-85 319.7 188 89.4
CAN.G761.1 Capsicum annuum HOM05D002864 ORTHO05D008485 1.8e-85 319.7 188 89.4
Lsat_1_v5_gn_4_66001 Lactuca sativa HOM05D002864 ORTHO05D008485 2.3e-85 319.3 188 87.2
Lsat_1_v5_gn_7_96661 Lactuca sativa HOM05D002864 ORTHO05D008485 2.3e-85 319.3 188 87.2
Aqoxy12s038 Aquilegia oxysepala HOM05D002864 ORTHO05D008485 8.9e-85 317.4 227 74.0
HanXRQChr04g0101201 Helianthus annuus HOM05D002864 ORTHO05D008485 2.0e-84 316.2 188 86.2
HanXRQMTg0579191 Helianthus annuus HOM05D002864 ORTHO05D008485 2.0e-84 316.2 188 86.2
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 1.9e-82 309.7 215 80.5
SGA_v2.0_scaffold420G51305 Striga asiatica HOM05D002864 ORTHO05D008485 2.3e-80 302.8 191 83.8
arahy.Tifrunner.gnm1.ann1.I2EFRY Arachis hypogaea HOM05D002864 ORTHO05D008485 3.9e-80 302.0 174 87.9
unitig_87.g28031 Utricularia gibba HOM05D002864 ORTHO05D008485 5.6e-79 298.1 197 81.2
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 5.2e-77 291.6 159 91.8
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 7.6e-76 287.7 173 86.7
DCAR_032433 Daucus carota HOM05D002864 ORTHO05D008485 2.9e-75 285.8 182 81.9
Rhsim07G0136600 Rhododendron simsii HOM05D002864 ORTHO05D008485 2.9e-75 285.8 188 81.4
Gohir.A06G146200 Gossypium hirsutum HOM05D002864 ORTHO05D008485 1.4e-74 283.5 153 92.2
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.4e-74 283.5 174 87.4
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.2e-73 280.4 173 86.1
HanXRQChr01g0001471 Helianthus annuus HOM05D002864 ORTHO05D008485 2.7e-73 279.3 187 78.6
Lj2P1221T99 Lonicera japonica HOM05D002864 ORTHO05D008485 4.6e-73 278.5 156 91.7
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 1.1e-71 273.9 161 90.1
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 4.7e-70 268.5 159 84.9
Nitab4.5_0004300g0150 Nicotiana tabacum HOM05D002864 ORTHO05D008485 2.1e-65 253.1 188 75.0
SHI40661 Sapria himalayana HOM05D002864 ORTHO05D008485 7.8e-65 251.1 168 81.5
Ah.09g227250 Amaranthus hybridus HOM05D002864 ORTHO05D008485 3.1e-61 239.2 147 83.7
Zm00001eb299530 Zea mays HOM05D002864 ORTHO05D008485 6.0e-57 224.9 189 61.4
arahy.Tifrunner.gnm1.ann1.3LP0N0 Arachis hypogaea HOM05D002864 ORTHO05D008485 2.8e-54 216.1 125 84.8
ATR0709G086 Amborella trichopoda HOM05D002864 ORTHO05D008485 6.2e-54 214.9 134 79.1
HanXRQChr13g0389461 Helianthus annuus HOM05D002864 ORTHO05D008485 1.1e-53 214.2 150 76.0
Lsat_1_v5_gn_7_25860 Lactuca sativa HOM05D002864 ORTHO05D008485 2.6e-52 209.5 129 85.3
Lsat_1_v5_gn_5_71841 Lactuca sativa HOM05D002864 ORTHO05D008485 2.2e-51 206.5 133 83.5
RcHm_v2.0_Chr5g0061711 Rosa chinensis HOM05D002864 ORTHO05D008485 3.8e-51 205.7 186 61.3
Gohir.D12G077000 Gossypium hirsutum HOM05D002864 ORTHO05D008485 6.0e-49 198.4 178 65.2
FvH4_3g34030 Fragaria vesca HOM05D002864 ORTHO05D008485 1.3e-48 197.2 187 59.9
FAN11G1817 Fragaria x ananassa HOM05D002864 ORTHO05D008485 1.3e-48 197.2 187 59.9
FAN16G0826 Fragaria x ananassa HOM05D002864 ORTHO05D008485 3.9e-48 195.7 187 59.4
FAN21G0602 Fragaria x ananassa HOM05D002864 ORTHO05D008485 3.9e-48 195.7 187 59.4
SEGI_29573 Sequoiadendron giganteum HOM05D002864 ORTHO05D008485 1.6e-46 190.3 184 59.8
HanXRQChr13g0393901 Helianthus annuus HOM05D002864 ORTHO05D008485 2.1e-46 189.9 115 85.2
ClCG06G009270 Citrullus lanatus HOM05D002864 ORTHO05D008485 3.9e-40 169.1 95 84.2
MELO3C035260.2 Cucumis melo HOM05D002864 ORTHO05D008485 1.4e-37 160.6 109 78.0
MELO3C000759.2 Cucumis melo HOM05D002864 ORTHO05D008485 6.9e-37 158.3 109 77.1
Nitab4.5_0000120g0100 Nicotiana tabacum HOM05D002864 ORTHO05D008485 4.5e-36 155.6 174 56.3
arahy.Tifrunner.gnm1.ann1.IM9F8N Arachis hypogaea HOM05D002864 ORTHO05D008485 1.1e-34 151.0 84 89.3
CAN.G826.1 Capsicum annuum HOM05D002864 ORTHO05D008485 2.5e-34 149.8 85 87.1
Actinidia34819 Actinidia chinensis HOM05D002864 ORTHO05D008485 1.6e-33 147.1 72 98.6
Solyc09g050040.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 3.9e-32 142.5 107 75.7
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 2.5e-31 139.8 72 94.4
HanXRQChr13g0389471 Helianthus annuus HOM05D002864 ORTHO05D008485 4.3e-31 139.0 86 81.4
PGSC0003DMG400033612 Solanum tuberosum HOM05D002864 ORTHO05D008485 4.3e-31 139.0 74 93.2
Ca_08792_v3 Cicer arietinum L. HOM05D000255 ORTHO05D028863 1.3e-30 137.5 68 97.1
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 1.3e-30 137.5 68 97.1
MELO3C035317.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.8e-30 136.3 107 70.1
CAN.G1439.10 Capsicum annuum HOM05D002864 ORTHO05D008485 1.8e-29 133.7 77 87.0
MELO3C005021.2 Cucumis melo HOM05D002864 ORTHO05D008485 1.8e-29 133.7 107 69.2
CAN.G1001.40 Capsicum annuum HOM05D002864 ORTHO05D008485 3.1e-29 132.9 74 86.5
CAN.G1542.4 Capsicum annuum HOM05D002864 ORTHO05D008485 3.2e-26 122.9 106 66.0
arahy.Tifrunner.gnm1.ann1.G1F49J Arachis hypogaea HOM05D002864 ORTHO05D008485 5.5e-26 122.1 107 61.7
ATR0091G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 1.6e-25 120.6 74 79.7
AagrBONN_evm.TU.Sc2ySwM_117.2676 Anthoceros agrestis HOM05D002864 ORTHO05D008485 7.9e-25 118.2 186 38.2
Nitab4.5_0000684g0100 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.4e-24 117.5 69 81.2
ATR0104G021 Amborella trichopoda HOM05D002864 ORTHO05D008485 8.8e-24 114.8 70 78.6
ATR0015G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 6.3e-22 108.6 69 75.4
ATR0573G003 Amborella trichopoda HOM05D002864 ORTHO05D008485 5.3e-21 105.5 66 77.3
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 1.2e-20 104.4 61 83.6
CAN.G502.17 Capsicum annuum HOM05D002864 ORTHO05D008485 3.4e-20 102.8 71 74.6
ATR0004G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 8.5e-19 98.2 66 68.2
ATR1100G026 Amborella trichopoda HOM05D002864 ORTHO05D008485 3.2e-18 96.3 55 83.6
ATR0959G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 1.5e-15 87.4 49 83.7
ClCG02G008120 Citrullus lanatus HOM05D002864 ORTHO05D008485 9.7e-15 84.7 53 79.2
Nitab4.5_0024895g0040 Nicotiana tabacum HOM05D002864 ORTHO05D008485 8.2e-14 81.6 53 81.1
Mapoly0023s0175 Marchantia polymorpha HOM05D002864 ORTHO05D008485 7.0e-13 78.6 62 66.1
MELO3C013035.2 Cucumis melo HOM05D002864 ORTHO05D008485 5.9e-12 75.5 68 58.8
Medtr2g096500 Medicago truncatula HOM05D006496 ORTHO05D008485 2.2e-11 73.6 40 90.0
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 4.2e-10 69.3 42 81.0
Solyc11g043190.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 4.2e-10 69.3 49 71.4
ATR0135G003 Amborella trichopoda HOM05D002864 ORTHO05D008485 7.2e-10 68.6 36 88.9
CAN.G1439.9 Capsicum annuum HOM05D002864 ORTHO05D008485 4.7e-09 65.9 39 76.9
Psat1g132440 Pisum sativum HOM05D002864 ORTHO05D007972 1.8e-08 63.9 56 64.3
C09p10440 Brassica napus HOM05D002864 ORTHO05D008485 8.8e-08 61.6 34 85.3
Phvul.011G109300 Phaseolus vulgaris HOM05D007099 ORTHO05D009081 1.5e-07 60.8 36 75.0
MELO3C031088.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.0e-07 60.5 39 66.7
Nitab4.5_0000317g0150 Nicotiana tabacum HOM05D002578 ORTHO05D002698 3.3e-07 59.7 39 74.4
Solyc01g049950.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 1.7e-06 57.4 59 61.0
MELO3C030561.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.2e-06 57.0 40 72.5
Pp3c2_23470 Physcomitrium patens HOM05D002864 ORTHO05D008485 6.3e-06 55.5 55 60.0


User provided reference genes

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