Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0068331 Lupinus albus HOM05D002254 ORTHO05D005423 8.3e-27 122.9 58 100.0
Lalb_Chr08g0238481 Lupinus albus HOM05D002254 ORTHO05D005423 3.6e-22 107.5 53 92.5
VMungo1309G0562 Vigna mungo HOM05D002254 ORTHO05D005423 2.0e-20 101.7 53 86.8
Hma1.2p1_0183F.1_g080930 Hydrangea macrophylla HOM05D002254 ORTHO05D005423 3.4e-20 100.9 53 88.7
Atru.chr4.828 Acer truncatum HOM05D002254 ORTHO05D005423 7.5e-20 99.8 53 84.9
DCAR_001358 Daucus carota HOM05D002254 ORTHO05D005423 7.5e-20 99.8 53 86.8
Dinv24771 Davidia involucrata HOM05D002254 ORTHO05D005423 7.5e-20 99.8 53 86.8
Dinv30096 Davidia involucrata HOM05D002254 ORTHO05D005423 7.5e-20 99.8 53 86.8
Potri.005G061700 Populus trichocarpa HOM05D002254 ORTHO05D005423 7.5e-20 99.8 53 86.8
Thecc.01G127100 Theobroma cacao HOM05D002254 ORTHO05D005423 7.5e-20 99.8 53 86.8
CSS0030870 Camellia sinensis var. sinensis HOM05D002254 ORTHO05D005423 9.8e-20 99.4 53 86.8
Cc07_g18050 Coffea canephora HOM05D002254 ORTHO05D005423 1.3e-19 99.0 53 84.9
Potri.007G107100 Populus trichocarpa HOM05D002254 ORTHO05D005423 1.3e-19 99.0 53 84.9
PGR102G3355 Punica granatum HOM05D002254 ORTHO05D005423 1.3e-19 99.0 53 84.9
MSTRG.2664 Avicennia marina HOM05D002254 ORTHO05D005423 1.7e-19 98.6 53 84.9
CANSAT01G2903 Cannabis sativa HOM05D002254 ORTHO05D005423 1.7e-19 98.6 53 83.0
Cfa002830 Carpinus fangiana HOM05D002254 ORTHO05D005423 1.7e-19 98.6 53 84.9
Haze_25127 Corylus avellana HOM05D002254 ORTHO05D005423 1.7e-19 98.6 53 84.9
Eucgr.H04941 Eucalyptus grandis HOM05D002254 ORTHO05D005423 1.7e-19 98.6 53 81.1
vmacro14290 Vaccinium macrocarpon HOM05D002254 ORTHO05D005423 1.7e-19 98.6 53 84.9
VMungo0647G1804 Vigna mungo HOM05D002254 ORTHO05D005423 1.7e-19 98.6 53 84.9
Ah.01g009370 Amaranthus hybridus HOM05D002254 ORTHO05D005423 2.2e-19 98.2 53 84.9
MD01G1012100 Malus domestica HOM05D002254 ORTHO05D005423 2.2e-19 98.2 52 84.6
AUR62013095 Chenopodium quinoa HOM05D002254 ORTHO05D005423 2.9e-19 97.8 53 83.0
Duzib147G0903 Durio zibethinus HOM05D002254 ORTHO05D005423 2.9e-19 97.8 53 84.9
Manes.12G153000 Manihot esculenta HOM05D002254 ORTHO05D005423 2.9e-19 97.8 53 84.9
TWI31G0091 Tripterygium wilfordii HOM05D002254 ORTHO05D005423 2.9e-19 97.8 50 88.0
GSVIVG01026526001 Vitis vinifera HOM05D002254 ORTHO05D005423 2.9e-19 97.8 53 83.0
Psat5g056880 Pisum sativum HOM05D002254 ORTHO05D005423 3.7e-19 97.4 53 83.0
TAR381G1435 Trochodendron aralioides HOM05D002254 ORTHO05D005423 3.7e-19 97.4 54 83.3
QL06p029474 Quercus lobata HOM05D002254 ORTHO05D005423 4.9e-19 97.1 50 88.0
HPP92_013266 Vanilla planifolia HOM05D002254 ORTHO05D005423 4.9e-19 97.1 53 81.1
HPP92_013271 Vanilla planifolia HOM05D002254 ORTHO05D005423 4.9e-19 97.1 53 81.1
Duzib264G0949 Durio zibethinus HOM05D002254 ORTHO05D005423 6.4e-19 96.7 53 83.0
Oeu000401.1 Olea europaea HOM05D002254 ORTHO05D005423 8.3e-19 96.3 54 81.5
Oeu038989.2 Olea europaea HOM05D002254 ORTHO05D005423 8.3e-19 96.3 54 81.5
Lj2A603T35 Lonicera japonica HOM05D002254 ORTHO05D005423 1.1e-18 95.9 54 79.6
Migut.H00743 Erythranthe guttata HOM05D002254 ORTHO05D005423 1.4e-18 95.5 54 79.6
Thhalv10014895m.g Eutrema salsugineum HOM05D002254 ORTHO05D005423 1.4e-18 95.5 53 83.0
Glyma.06G151700 Glycine max HOM05D002254 ORTHO05D005423 1.4e-18 95.5 53 83.0
PGR142G4456 Punica granatum HOM05D002254 ORTHO05D005423 1.9e-18 95.1 53 83.0
Hund06402 Selenicereus undatus HOM05D002254 ORTHO05D005423 1.9e-18 95.1 53 83.0
EL10Ac9g21444 Beta vulgaris HOM05D002254 ORTHO05D005423 2.4e-18 94.7 53 83.0
Cpa.g.sc42.118 Carica papaya HOM05D002254 ORTHO05D005423 2.4e-18 94.7 53 83.0
ClCG01G015530 Citrullus lanatus HOM05D002254 ORTHO05D005423 2.4e-18 94.7 52 84.6
COL.COLO4_14017 Corchorus olitorius HOM05D002254 ORTHO05D005423 2.4e-18 94.7 53 81.1
Phvul.009G148700 Phaseolus vulgaris HOM05D002254 ORTHO05D005423 2.4e-18 94.7 53 83.0
TWI75G1050 Tripterygium wilfordii HOM05D002254 ORTHO05D005423 2.4e-18 94.7 50 86.0
ATR0681G323 Amborella trichopoda HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 79.2
BcaB04g19981 Brassica carinata HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 81.1
BcaC04g23302 Brassica carinata HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 81.1
A09p08760 Brassica napus HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 81.1
C09p09930 Brassica napus HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 81.1
BolC9t53900H Brassica oleracea HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 81.1
BraA09t36526Z Brassica rapa HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 81.1
Ca_16929_v3 Cicer arietinum L. HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 79.2
MD15G1337900 Malus domestica HOM05D002254 ORTHO05D005423 3.2e-18 94.4 53 79.2
AUR62010099 Chenopodium quinoa HOM05D002254 ORTHO05D005423 4.1e-18 94.0 53 81.1
Oeu037798.1 Olea europaea HOM05D002254 ORTHO05D005423 4.1e-18 94.0 54 79.6
Os01g0839300 Oryza sativa ssp. japonica HOM05D002254 ORTHO05D005423 4.1e-18 94.0 53 81.1
Glyma.04G214500 Glycine max HOM05D002254 ORTHO05D005423 5.4e-18 93.6 53 81.1
Gohir.A01G176800 Gossypium hirsutum HOM05D002254 ORTHO05D005423 5.4e-18 93.6 53 81.1
Gohir.D01G167600 Gossypium hirsutum HOM05D002254 ORTHO05D005423 5.4e-18 93.6 53 81.1
Gorai.002G208300 Gossypium raimondii HOM05D002254 ORTHO05D005423 5.4e-18 93.6 53 81.1
RcHm_v2.0_Chr5g0024011 Rosa chinensis HOM05D002254 ORTHO05D005423 5.4e-18 93.6 54 81.5
Carub.0006s0818 Capsella rubella HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 81.1
MELO3C008044.2 Cucumis melo HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 79.2
HanXRQChr05g0152951 Helianthus annuus HOM05D002254 ORTHO05D005423 7.0e-18 93.2 50 86.0
Medtr3g095900 Medicago truncatula HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 79.2
Nitab4.5_0000250g0020 Nicotiana tabacum HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 81.1
Nitab4.5_0004141g0030 Nicotiana tabacum HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 81.1
Peaxi162Scf00105g00116 Petunia axillaris HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 81.1
SalBow4G0817 Salvia bowleyana HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 81.1
Solyc08g067950.3 Solanum lycopersicum HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 81.1
Sopen08g021870 Solanum pennellii HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 81.1
PGSC0003DMG400014486 Solanum tuberosum HOM05D002254 ORTHO05D005423 7.0e-18 93.2 53 81.1
Actinidia06650 Actinidia chinensis HOM05D002254 ORTHO05D005423 9.2e-18 92.8 53 79.2
Aqoxy5G00323 Aquilegia oxysepala HOM05D002254 ORTHO05D005423 9.2e-18 92.8 54 77.8
AL6G20170 Arabidopsis lyrata HOM05D002254 ORTHO05D005423 9.2e-18 92.8 53 81.1
arahy.Tifrunner.gnm1.ann1.FM41R7 Arachis hypogaea HOM05D002254 ORTHO05D005423 9.2e-18 92.8 53 77.4
arahy.Tifrunner.gnm1.ann1.N1TEIX Arachis hypogaea HOM05D002254 ORTHO05D005423 9.2e-18 92.8 53 77.4
BcaB01g05562 Brassica carinata HOM05D002254 ORTHO05D005423 9.2e-18 92.8 54 79.6
BcaB01g05660 Brassica carinata HOM05D002254 ORTHO05D005423 9.2e-18 92.8 54 79.6
A03p04230 Brassica napus HOM05D002254 ORTHO05D005423 9.2e-18 92.8 54 79.6
C03p04680 Brassica napus HOM05D002254 ORTHO05D005423 9.2e-18 92.8 54 79.6
BolC3t13002H Brassica oleracea HOM05D002254 ORTHO05D005423 9.2e-18 92.8 54 79.6
BraA03t09768Z Brassica rapa HOM05D002254 ORTHO05D005423 9.2e-18 92.8 54 79.6
CDE04G0736 Ceratophyllum demersum HOM05D002254 ORTHO05D005423 9.2e-18 92.8 53 83.0
CsaV3_6G041770 Cucumis sativus L. HOM05D002254 ORTHO05D005423 9.2e-18 92.8 52 82.7
HanXRQChr08g0236341 Helianthus annuus HOM05D002254 ORTHO05D005423 9.2e-18 92.8 50 86.0
Lsat_1_v5_gn_3_37780 Lactuca sativa HOM05D002254 ORTHO05D005423 9.2e-18 92.8 50 86.0
Medtr8g103900 Medicago truncatula HOM05D002254 ORTHO05D005423 9.2e-18 92.8 53 79.2
Oeu047679.1 Olea europaea HOM05D002254 ORTHO05D005423 9.2e-18 92.8 54 77.8
arahy.Tifrunner.gnm1.ann1.2KW32D Arachis hypogaea HOM05D002254 ORTHO05D005423 1.2e-17 92.4 53 77.4
CAN.G679.3 Capsicum annuum HOM05D002254 ORTHO05D005423 1.2e-17 92.4 53 81.1
CiPaw.03G128400 Carya illinoinensis HOM05D002254 ORTHO05D005423 1.2e-17 92.4 53 79.2
FvH4_3g14560 Fragaria vesca HOM05D002254 ORTHO05D005423 1.2e-17 92.4 54 79.6
FAN11G0976 Fragaria x ananassa HOM05D002254 ORTHO05D005423 1.2e-17 92.4 54 79.6
FAN16G3547 Fragaria x ananassa HOM05D002254 ORTHO05D005423 1.2e-17 92.4 54 79.6
FAN21G0823 Fragaria x ananassa HOM05D002254 ORTHO05D005423 1.2e-17 92.4 54 79.6
Prupe.6G158000 Prunus persica HOM05D002254 ORTHO05D005423 1.2e-17 92.4 53 81.1
Sed0005738 Sechium edule HOM05D002254 ORTHO05D005423 1.2e-17 92.4 53 79.2
Sc06g0001400 Simmondsia chinensis HOM05D002254 ORTHO05D005423 1.2e-17 92.4 54 75.9
TPR.G34646 Trifolium pratense HOM05D002254 ORTHO05D005423 1.2e-17 92.4 53 81.1
Zm00001eb368030 Zea mays HOM05D002254 ORTHO05D005423 1.2e-17 92.4 53 81.1
Lj1g0024859 Lotus japonicus HOM05D002254 ORTHO05D005423 1.6e-17 92.0 52 78.8
AT5G09770 Arabidopsis thaliana HOM05D002254 ORTHO05D005423 2.0e-17 91.7 53 79.2
Sp6g33620 Schrenkiella parvula HOM05D002254 ORTHO05D005423 2.7e-17 91.3 50 84.0
AL8G42060 Arabidopsis lyrata HOM05D002254 ORTHO05D005423 3.5e-17 90.9 53 79.2
AT5G64650 Arabidopsis thaliana HOM05D002254 ORTHO05D005423 3.5e-17 90.9 53 79.2
Nn5g28635 Nelumbo nucifera HOM05D002254 ORTHO05D005423 3.5e-17 90.9 54 77.8
PSO675G8066 Papaver somniferum HOM05D002254 ORTHO05D005423 3.5e-17 90.9 50 80.0
Carub.0008s2544 Capsella rubella HOM05D002254 ORTHO05D005423 4.6e-17 90.5 53 79.2
THA.LOC104799480 Tarenaya hassleriana HOM05D002254 ORTHO05D005423 6.0e-17 90.1 54 75.9
ECA246G3091 Erigeron canadensis HOM05D002254 ORTHO05D005423 1.0e-16 89.4 50 84.0
Sp2g27710 Schrenkiella parvula HOM05D002254 ORTHO05D005423 1.0e-16 89.4 53 77.4
unitig_8.g4580 Utricularia gibba HOM05D002254 ORTHO05D005423 1.0e-16 89.4 53 75.5
CARHR203630 Cardamine hirsuta HOM05D002254 ORTHO05D005423 1.3e-16 89.0 53 77.4
PSO541G1616 Papaver somniferum HOM05D002254 ORTHO05D005423 1.3e-16 89.0 49 79.6
Aa31LG1G17310 Aethionema arabicum HOM05D002254 ORTHO05D005423 3.0e-16 87.8 53 77.4
Aa31LG3G17330 Aethionema arabicum HOM05D002254 ORTHO05D005423 3.9e-16 87.4 53 77.4
Ciclev10026667m.g Citrus clementina HOM05D002254 ORTHO05D005423 2.5e-15 84.7 50 76.0
Thhalv10005089m.g Eutrema salsugineum HOM05D002254 ORTHO05D005423 7.3e-15 83.2 49 77.6
BolC3t13004H Brassica oleracea HOM05D002254 ORTHO05D005423 9.5e-15 82.8 55 72.7
THA.LOC104818462 Tarenaya hassleriana HOM05D002254 ORTHO05D005423 1.2e-14 82.4 53 73.6
CARHR278620 Cardamine hirsuta HOM05D002254 ORTHO05D005423 6.2e-14 80.1 52 73.1
SEGI_31183 Sequoiadendron giganteum HOM05D002254 ORTHO05D005423 1.8e-13 78.6 53 73.6
EL10Ac1g01201 Beta vulgaris HOM05D002254 ORTHO05D005423 1.2e-12 75.9 44 79.5
MBI10_g06742_MAGBIO Magnolia biondii HOM05D002254 ORTHO05D005423 1.3e-11 72.4 44 79.5
Mapoly0072s0005 Marchantia polymorpha HOM05D002254 ORTHO05D005423 8.3e-11 69.7 49 67.3
AagrBONN_evm.TU.Sc2ySwM_344.4427 Anthoceros agrestis HOM05D002254 ORTHO05D005423 1.4e-10 68.9 52 63.5
Pp3c16_7040 Physcomitrium patens HOM05D002254 ORTHO05D005423 1.9e-10 68.6 49 65.3
CBR_g41367 Chara braunii HOM05D002254 ORTHO05D005423 4.1e-10 67.4 50 64.0
Rhsim10G0136900 Rhododendron simsii HOM05D000987 ORTHO05D000831 3.5e-09 64.3 36 80.6
A06p31380 Brassica napus HOM05D002254 ORTHO05D005423 3.0e-08 61.2 48 56.2
EL10Ac5g12108 Beta vulgaris HOM05D002254 ORTHO05D005423 1.9e-07 58.5 50 60.0
Sabra05G0051900 Salix brachista HOM05D002254 ORTHO05D005423 6.2e-06 53.5 34 70.6
EL10Ac5g11356 Beta vulgaris HOM05D002254 ORTHO05D005423 8.1e-06 53.1 54 53.7
EL10Ac5g11449 Beta vulgaris HOM05D002254 ORTHO05D005423 8.1e-06 53.1 54 53.7


User provided reference genes

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