Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0066211 Lupinus albus HOM05D000237 ORTHO05D006530 0.0e+00 2635.9 1423 100.0
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 1.1e-66 260.0 487 40.7
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 2.2e-64 252.3 521 38.6
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 3.2e-47 195.3 210 67.6
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 1.6e-46 193.0 209 67.5
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 7.9e-46 190.7 210 66.7
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 1.8e-45 189.5 212 66.5
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 1.8e-45 189.5 212 66.5
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 1.8e-45 189.5 210 66.2
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 8.8e-45 187.2 508 33.1
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 9.7e-44 183.7 213 64.8
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 1.3e-43 183.3 500 33.4
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 1.1e-42 180.3 206 68.0
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 4.1e-42 178.3 210 64.8
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 2.6e-41 175.6 210 65.2
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 1.0e-40 173.7 259 47.5
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 2.5e-39 169.1 215 62.3
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 7.2e-39 167.5 544 32.7
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 2.3e-37 162.5 216 59.7
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 4.0e-37 161.8 206 63.1
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 5.2e-37 161.4 209 64.1
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 2.6e-36 159.1 210 63.3
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 7.5e-36 157.5 216 58.3
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 4.8e-35 154.8 203 61.1
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 8.2e-35 154.1 203 60.6
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 1.8e-34 152.9 212 59.9
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 2.4e-34 152.5 203 60.6
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.1e-34 152.1 203 60.1
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 3.1e-34 152.1 208 61.1
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 4.1e-34 151.8 203 60.6
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 5.3e-34 151.4 207 60.9
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 1.2e-33 150.2 205 63.4
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 1.6e-33 149.8 212 59.0
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 2.7e-33 149.1 137 59.1
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 4.5e-33 148.3 212 59.9
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 1.7e-32 146.4 206 62.6
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 2.9e-32 145.6 206 60.2
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 2.9e-32 145.6 207 60.9
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 3.8e-32 145.2 218 58.7
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 6.5e-32 144.4 209 60.8
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 6.5e-32 144.4 214 56.1
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 1.1e-31 143.7 206 61.2
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 1.5e-31 143.3 238 39.5
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 4.2e-31 141.7 232 55.2
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 5.5e-31 141.4 203 58.6
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 7.2e-31 141.0 216 57.9
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 9.4e-31 140.6 212 59.0
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 9.4e-31 140.6 214 57.9
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 9.4e-31 140.6 206 57.8
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 1.6e-30 139.8 214 55.1
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 8.0e-30 137.5 204 59.8
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 1.8e-29 136.3 137 55.5
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 1.8e-29 136.3 206 58.3
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 1.8e-29 136.3 214 57.5
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 5.2e-29 134.8 216 56.0
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 1.5e-28 133.3 218 55.5
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 1.5e-28 133.3 137 55.5
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 2.0e-28 132.9 139 51.8
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 3.4e-28 132.1 215 56.3
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 9.8e-28 130.6 209 56.9
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 1.7e-27 129.8 143 51.0
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 2.2e-27 129.4 202 56.9
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 8.3e-27 127.5 213 57.3
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 1.6e-25 123.2 205 49.3
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 2.7e-25 122.5 210 55.7
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 3.5e-25 122.1 209 53.6
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 5.9e-25 121.3 147 44.9
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 1.0e-24 120.6 234 34.2
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 2.3e-24 119.4 205 47.8
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 2.9e-24 119.0 205 47.8
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 3.8e-24 118.6 268 46.6
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 8.6e-24 117.5 147 44.2
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 5.5e-23 114.8 210 53.8
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 1.2e-22 113.6 229 51.5
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 1.6e-22 113.2 207 54.1
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 2.1e-22 112.8 206 54.9
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 2.1e-22 112.8 229 51.5
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 2.8e-22 112.5 167 63.5
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 3.6e-22 112.1 203 53.7
PGSC0003DMG402025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 3.6e-22 112.1 144 41.7
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 3.6e-22 112.1 204 54.4
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 4.7e-22 111.7 144 45.8
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 4.7e-22 111.7 248 48.4
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 6.1e-22 111.3 262 45.8
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 6.1e-22 111.3 137 47.4
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 1.5e-20 106.7 207 48.8
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 4.4e-20 105.1 202 53.0
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 9.8e-20 104.0 204 47.1
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 9.8e-20 104.0 145 44.8
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 3.7e-19 102.1 196 35.7
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 4.9e-19 101.7 167 59.9
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 8.3e-19 100.9 140 45.0
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 1.1e-18 100.5 215 52.1
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 1.4e-18 100.1 207 49.3
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 3.1e-18 99.0 214 46.7
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 5.4e-18 98.2 207 48.8
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 2.0e-17 96.3 207 47.8
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 2.0e-17 96.3 208 50.0
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 4.5e-17 95.1 202 51.5
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 5.9e-17 94.7 203 51.7
Lj4A681T41 Lonicera japonica HOM05D000237 ORTHO05D006530 1.0e-16 94.0 151 39.7
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 3.8e-16 92.0 124 66.1
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 1.0e-13 84.0 203 50.2
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 5.2e-13 81.6 197 49.7
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 2.9e-11 75.9 135 37.8
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 6.4e-11 74.7 139 35.3
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 8.3e-11 74.3 213 46.0
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 3.5e-09 68.9 129 60.5
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 2.5e-07 62.8 167 49.7
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 3.3e-07 62.4 125 32.8
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 5.6e-07 61.6 138 31.9
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 1.6e-06 60.1 30 90.0
TPR.G4655 Trifolium pratense HOM05D000237 ORTHO05D013217 1.6e-06 60.1 58 53.4
Cpa.g.sc1718.3 Carica papaya HOM05D000237 ORTHO05D006530 6.2e-06 58.2 138 37.0


User provided reference genes

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