Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0064511 Lupinus albus HOM05D005944 ORTHO05D007188 3.8e-134 481.5 238 100.0
Phvul.009G110100 Phaseolus vulgaris HOM05D005944 ORTHO05D007188 1.2e-103 380.2 249 78.3
VMungo1309G1803 Vigna mungo HOM05D005944 ORTHO05D007188 6.5e-102 374.4 241 79.3
TPR.G15103 Trifolium pratense HOM05D005944 ORTHO05D007188 2.8e-97 359.0 245 74.3
Glyma.06G086100 Glycine max HOM05D005944 ORTHO05D007188 1.4e-96 356.7 236 78.0
Psat5g021160 Pisum sativum HOM05D005944 ORTHO05D007188 1.7e-94 349.7 239 73.6
Medtr3g109690 Medicago truncatula HOM05D005944 ORTHO05D007188 2.9e-94 349.0 219 76.3
Ca_15588_v3 Cicer arietinum L. HOM05D005944 ORTHO05D007188 9.4e-93 344.0 238 73.1
QL12p041319 Quercus lobata HOM05D005944 ORTHO05D007188 1.4e-88 330.1 233 66.5
Cfa013369 Carpinus fangiana HOM05D005944 ORTHO05D007188 3.5e-87 325.5 238 66.4
Prupe.1G447700 Prunus persica HOM05D005944 ORTHO05D007188 1.7e-86 323.2 245 65.3
Potri.006G238000 Populus trichocarpa HOM05D005944 ORTHO05D007188 5.0e-86 321.6 236 66.1
Haze_21893 Corylus avellana HOM05D005944 ORTHO05D007188 1.5e-85 320.1 238 66.4
Cc08_g09670 Coffea canephora HOM05D005944 ORTHO05D007188 3.2e-85 318.9 228 66.2
Duzib168G0738 Durio zibethinus HOM05D005944 ORTHO05D007188 6.1e-84 314.7 240 67.1
TAR626G0255 Trochodendron aralioides HOM05D005944 ORTHO05D007188 1.4e-83 313.5 235 66.0
CSS0001771 Camellia sinensis var. sinensis HOM05D005944 ORTHO05D007188 2.3e-83 312.8 229 64.2
Manes.16G075200 Manihot esculenta HOM05D005944 ORTHO05D007188 3.0e-83 312.4 238 63.4
CiPaw.08G026000 Carya illinoinensis HOM05D005944 ORTHO05D007188 2.0e-82 309.7 226 66.4
MD08G1113400 Malus domestica HOM05D005944 ORTHO05D007188 3.3e-82 308.9 244 61.9
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla HOM05D005944 ORTHO05D007188 5.7e-82 308.1 229 65.5
Lj1g0013558 Lotus japonicus HOM05D005944 ORTHO05D007188 5.7e-82 308.1 205 71.7
Ciclev10009275m.g Citrus clementina HOM05D005944 ORTHO05D007188 1.4e-80 303.5 243 63.4
Sabra06G0186300 Salix brachista HOM05D005944 ORTHO05D007188 2.4e-80 302.8 216 66.7
CiPaw.07G203800 Carya illinoinensis HOM05D005944 ORTHO05D007188 3.1e-80 302.4 240 61.2
Thecc.09G045700 Theobroma cacao HOM05D005944 ORTHO05D007188 9.1e-80 300.8 226 66.4
Gohir.A06G092600 Gossypium hirsutum HOM05D005944 ORTHO05D007188 3.5e-79 298.9 212 66.0
Nn8g39119 Nelumbo nucifera HOM05D005944 ORTHO05D007188 3.5e-79 298.9 239 62.3
Sc09g0009310 Simmondsia chinensis HOM05D005944 ORTHO05D007188 3.5e-79 298.9 238 60.5
Oeu031102.1 Olea europaea HOM05D005944 ORTHO05D007188 4.5e-79 298.5 234 61.1
Gohir.D06G092200 Gossypium hirsutum HOM05D005944 ORTHO05D007188 7.7e-79 297.7 225 63.6
TWI34G0404 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 1.3e-78 297.0 232 62.5
vmacro23277 Vaccinium macrocarpon HOM05D005944 ORTHO05D007188 1.3e-78 297.0 241 60.2
COL.COLO4_20974 Corchorus olitorius HOM05D005944 ORTHO05D007188 8.5e-78 294.3 210 66.2
Aqoxy7G01465 Aquilegia oxysepala HOM05D005944 ORTHO05D007188 1.5e-77 293.5 231 61.0
Gorai.010G106200 Gossypium raimondii HOM05D005944 ORTHO05D007188 3.2e-77 292.4 225 62.7
Rhsim07G0147000 Rhododendron simsii HOM05D005944 ORTHO05D007188 5.5e-77 291.6 225 62.2
Cpa.g.sc78.4 Carica papaya HOM05D005944 ORTHO05D007188 3.6e-76 288.9 241 61.0
PSO173G0044 Papaver somniferum HOM05D005944 ORTHO05D007188 1.0e-75 287.3 235 59.1
TWI63G0268 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 3.0e-75 285.8 226 61.1
MSTRG.11696 Avicennia marina HOM05D005944 ORTHO05D007188 4.0e-75 285.4 230 60.0
Sc09g0009320 Simmondsia chinensis HOM05D005944 ORTHO05D007188 4.0e-75 285.4 214 62.6
MELO3C011137.2 Cucumis melo HOM05D005944 ORTHO05D007188 6.8e-75 284.6 233 57.9
MBI01_g42891_MAGBIO Magnolia biondii HOM05D005944 ORTHO05D007188 6.8e-75 284.6 226 59.3
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 2.6e-74 282.7 232 60.3
Sopen08g020390 Solanum pennellii HOM05D005944 ORTHO05D007188 2.6e-74 282.7 232 62.5
Eucgr.C00599 Eucalyptus grandis HOM05D005944 ORTHO05D007188 4.4e-74 282.0 239 60.3
PGSC0003DMG400002225 Solanum tuberosum HOM05D005944 ORTHO05D007188 4.4e-74 282.0 224 63.4
Lsat_1_v5_gn_5_33661 Lactuca sativa HOM05D005944 ORTHO05D007188 5.7e-74 281.6 209 61.7
Migut.A00199 Erythranthe guttata HOM05D005944 ORTHO05D007188 1.3e-73 280.4 230 61.3
MD15G1092800 Malus domestica HOM05D005944 ORTHO05D007188 2.2e-73 279.6 237 60.3
Peaxi162Scf00227g00915 Petunia axillaris HOM05D005944 ORTHO05D007188 3.7e-73 278.9 228 61.0
Nitab4.5_0003794g0090 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.8e-72 276.6 230 59.1
Solyc08g066550.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 1.8e-72 276.6 233 60.9
DCAR_003123 Daucus carota HOM05D005944 ORTHO05D007188 7.0e-72 274.6 239 56.1
Ah.10g034990 Amaranthus hybridus HOM05D005944 ORTHO05D007188 7.7e-71 271.2 223 59.2
CANSAT25G1052 Cannabis sativa HOM05D005944 ORTHO05D007188 1.3e-70 270.4 229 60.7
EL10Ac2g04013 Beta vulgaris HOM05D005944 ORTHO05D007188 2.3e-70 269.6 216 61.6
HanXRQChr08g0234421 Helianthus annuus HOM05D005944 ORTHO05D007188 2.9e-70 269.2 205 61.5
Sed0020456 Sechium edule HOM05D005944 ORTHO05D007188 3.8e-70 268.9 222 60.8
EL10Ac2g04010 Beta vulgaris HOM05D005944 ORTHO05D007188 1.1e-69 267.3 216 61.1
PGR031G3052 Punica granatum HOM05D005944 ORTHO05D007188 1.5e-69 266.9 236 55.5
ECA246G4186 Erigeron canadensis HOM05D005944 ORTHO05D007188 1.9e-69 266.5 207 59.4
Nitab4.5_0001567g0220 Nicotiana tabacum HOM05D005944 ORTHO05D007188 4.2e-69 265.4 204 62.3
Atru.chr7.2083 Acer truncatum HOM05D005944 ORTHO05D007188 1.6e-68 263.5 263 53.6
AUR62009271 Chenopodium quinoa HOM05D005944 ORTHO05D007188 3.6e-68 262.3 210 61.0
Sed0026395 Sechium edule HOM05D005944 ORTHO05D007188 8.0e-68 261.2 223 59.2
SGA_v2.0_scaffold243G44289 Striga asiatica HOM05D005944 ORTHO05D007188 6.8e-67 258.1 205 59.0
AUR62039710 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.2e-66 257.3 211 59.7
SalBow4G1457 Salvia bowleyana HOM05D005944 ORTHO05D007188 3.5e-63 245.7 208 56.7
Nitab4.5_0000664g0190 Nicotiana tabacum HOM05D005944 ORTHO05D007188 4.5e-63 245.4 229 56.8
PGSC0003DMG400018561 Solanum tuberosum HOM05D005944 ORTHO05D007188 1.7e-62 243.4 216 57.4
unitig_32.g11474 Utricularia gibba HOM05D005944 ORTHO05D007188 2.8e-60 236.1 232 53.0
Ah.02g111320 Amaranthus hybridus HOM05D005944 ORTHO05D007188 4.0e-59 232.3 212 53.3
Nitab4.5_0001515g0030 Nicotiana tabacum HOM05D005944 ORTHO05D007188 6.8e-59 231.5 230 54.3
THA.LOC104799702 Tarenaya hassleriana HOM05D005944 ORTHO05D007188 5.8e-58 228.4 247 50.6
FvH4_2g35480 Fragaria vesca HOM05D005944 ORTHO05D007188 1.7e-57 226.9 202 52.5
FAN27G2199 Fragaria x ananassa HOM05D005944 ORTHO05D007188 2.2e-57 226.5 202 52.5
RcHm_v2.0_Chr6g0306401 Rosa chinensis HOM05D005944 ORTHO05D007188 3.7e-57 225.7 204 52.0
Zm00001eb384710 Zea mays HOM05D005944 ORTHO05D007188 1.9e-56 223.4 231 46.3
CARHR201600 Cardamine hirsuta HOM05D005944 ORTHO05D007188 5.4e-56 221.9 242 46.7
FAN20G0862 Fragaria x ananassa HOM05D005944 ORTHO05D007188 7.0e-56 221.5 207 50.2
Carub.0006s1010 Capsella rubella HOM05D005944 ORTHO05D007188 9.2e-56 221.1 265 47.9
FAN15G0753 Fragaria x ananassa HOM05D005944 ORTHO05D007188 6.0e-55 218.4 202 51.0
Thhalv10014372m.g Eutrema salsugineum HOM05D005944 ORTHO05D007188 7.8e-55 218.0 265 45.7
ECA233G3370 Erigeron canadensis HOM05D005944 ORTHO05D007188 1.0e-54 217.6 193 54.9
Os06g0554100 Oryza sativa ssp. japonica HOM05D005944 ORTHO05D007188 1.0e-54 217.6 243 47.3
HanXRQChr02g0050591 Helianthus annuus HOM05D005944 ORTHO05D007188 2.3e-54 216.5 190 55.3
AUR62011965 Chenopodium quinoa HOM05D005944 ORTHO05D007188 5.0e-54 215.3 229 47.2
TWI63G1513 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 5.0e-54 215.3 210 51.9
BcaB08g37038 Brassica carinata HOM05D005944 ORTHO05D007188 1.1e-53 214.2 264 45.5
A10p26150 Brassica napus HOM05D005944 ORTHO05D007188 2.5e-53 213.0 266 45.9
BraA10t44674Z Brassica rapa HOM05D005944 ORTHO05D007188 2.5e-53 213.0 266 45.9
BcaC04g19210 Brassica carinata HOM05D005944 ORTHO05D007188 3.3e-53 212.6 266 44.7
C09p65200 Brassica napus HOM05D005944 ORTHO05D007188 3.3e-53 212.6 266 44.7
BolC9t59349H Brassica oleracea HOM05D005944 ORTHO05D007188 4.3e-53 212.2 266 44.7
Sp6g32000 Schrenkiella parvula HOM05D005944 ORTHO05D007188 4.3e-53 212.2 263 44.9
Aa31LG3G15570 Aethionema arabicum HOM05D005944 ORTHO05D007188 1.6e-52 210.3 246 45.5
AL6G22330 Arabidopsis lyrata HOM05D005944 ORTHO05D007188 1.6e-52 210.3 270 45.9
AT5G11620 Arabidopsis thaliana HOM05D005944 ORTHO05D007188 2.6e-50 203.0 271 43.5
EL10Ac5g10487 Beta vulgaris HOM05D005944 ORTHO05D007188 9.8e-50 201.1 211 47.9
HPP92_024066 Vanilla planifolia HOM05D005944 ORTHO05D007188 6.4e-49 198.4 213 47.9
Glyma.04G084500 Glycine max HOM05D005944 ORTHO05D007188 3.2e-48 196.1 124 81.5
HanXRQChr13g0402041 Helianthus annuus HOM05D005944 ORTHO05D007188 1.2e-44 184.1 202 46.5
ATR0561G048 Amborella trichopoda HOM05D005944 ORTHO05D007188 1.3e-41 174.1 206 44.7
Peaxi162Scf00247g00005 Petunia axillaris HOM05D005944 ORTHO05D007188 1.4e-40 170.6 135 65.2
Actinidia14678 Actinidia chinensis HOM05D005944 ORTHO05D007188 5.4e-40 168.7 130 63.8
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 9.2e-40 167.9 202 44.6
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 1.6e-39 167.2 196 43.4
Sopen11g028870 Solanum pennellii HOM05D010581 ORTHO05D012655 2.3e-38 163.3 157 58.0
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 5.6e-37 158.7 202 44.6
Solyc11g071190.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 9.5e-37 157.9 135 61.5
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 3.1e-35 152.9 196 40.3
PSO507G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 8.4e-33 144.8 191 42.9
Pp3c11_3140 Physcomitrium patens HOM05D005944 ORTHO05D007188 3.9e-30 136.0 244 34.8
SEGI_16652 Sequoiadendron giganteum HOM05D005944 ORTHO05D007188 1.5e-29 134.0 213 38.0
SMO244G0014 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 3.6e-28 129.4 229 38.4
Zm00001eb277580 Zea mays HOM05D005944 ORTHO05D007188 3.6e-28 129.4 178 40.4
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 2.4e-27 126.7 216 36.6
SMO281G0003 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 3.1e-27 126.3 217 39.2
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 6.9e-27 125.2 216 36.6
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis HOM05D005944 ORTHO05D007188 5.8e-26 122.1 233 32.6
CDE05G1550 Ceratophyllum demersum HOM05D005944 ORTHO05D007188 4.2e-24 115.9 110 47.3
Cre09.g393550 Chlamydomonas reinhardtii HOM05D005944 ORTHO05D007188 1.7e-22 110.5 231 32.9
MCO02G382 Micromonas commoda HOM05D005944 ORTHO05D007188 3.0e-14 83.2 278 26.3
RcHm_v2.0_Chr6g0306281 Rosa chinensis HOM05D005944 ORTHO05D007188 1.1e-13 81.3 56 58.9
RcHm_v2.0_Chr6g0306291 Rosa chinensis HOM05D005944 ORTHO05D007188 9.6e-13 78.2 58 58.6
RcHm_v2.0_Chr6g0306391 Rosa chinensis HOM05D005944 ORTHO05D007188 4.8e-12 75.9 113 37.2
Mapoly0068s0072 Marchantia polymorpha HOM05D005944 ORTHO05D007188 6.4e-09 65.5 159 28.9
C02p05290 Brassica napus HOM05D005944 ORTHO05D007188 1.1e-08 64.7 104 39.4
BolC2t06477H Brassica oleracea HOM05D005944 ORTHO05D007188 2.5e-08 63.5 104 39.4


User provided reference genes

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