Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 4.8e-140 501.1 249 100.0
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 5.2e-86 321.6 240 70.4
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 6.8e-86 321.2 222 73.0
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 6.8e-86 321.2 222 73.0
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 2.6e-85 319.3 250 67.2
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 3.7e-84 315.5 213 72.8
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 2.1e-82 309.7 222 68.5
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 5.6e-80 301.6 236 65.7
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 5.4e-75 285.0 233 60.9
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 2.3e-73 279.6 241 60.2
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 3.0e-73 279.3 218 63.8
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 3.3e-72 275.8 219 61.2
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 5.6e-72 275.0 222 61.3
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 1.4e-70 270.4 217 59.9
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 6.9e-70 268.1 251 59.0
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 6.9e-70 268.1 212 59.4
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 3.4e-69 265.8 212 59.4
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 9.9e-69 264.2 213 59.6
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 2.2e-68 263.1 212 59.0
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 2.9e-68 262.7 224 58.5
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 4.9e-68 261.9 235 56.6
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 8.4e-68 261.2 241 54.8
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 1.4e-67 260.4 249 55.4
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 1.4e-67 260.4 238 57.1
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 1.4e-67 260.4 228 60.5
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 4.6e-66 255.4 215 55.3
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 1.3e-65 253.8 214 60.7
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 3.0e-65 252.7 224 58.9
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 3.0e-65 252.7 230 55.2
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.1e-64 250.8 234 55.6
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 1.5e-64 250.4 219 55.3
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 1.9e-64 250.0 216 56.9
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 1.9e-64 250.0 225 56.0
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 1.9e-64 250.0 227 54.2
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 3.3e-64 249.2 236 53.8
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 4.3e-64 248.8 213 55.4
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 1.6e-63 246.9 215 59.5
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 2.1e-63 246.5 211 58.3
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 2.1e-63 246.5 205 58.5
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 2.8e-63 246.1 216 56.5
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.8e-63 246.1 233 54.1
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 3.6e-63 245.7 229 52.4
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 3.6e-63 245.7 229 54.6
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 4.8e-63 245.4 240 54.6
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.4e-62 243.0 209 56.5
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 3.1e-62 242.7 227 52.0
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 4.0e-62 242.3 215 54.4
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 5.3e-62 241.9 230 53.5
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 5.3e-62 241.9 229 51.1
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 5.3e-62 241.9 229 51.1
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 6.9e-62 241.5 236 50.8
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 9.0e-62 241.1 227 52.4
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 9.0e-62 241.1 219 55.7
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 1.5e-61 240.4 259 49.0
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 5.8e-61 238.4 215 52.6
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 7.6e-61 238.0 229 51.1
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 9.9e-61 237.7 229 51.5
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 1.3e-60 237.3 222 50.9
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 1.7e-60 236.9 229 51.1
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 1.7e-60 236.9 231 52.8
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 3.8e-60 235.7 214 54.7
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 4.9e-60 235.3 244 53.3
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 4.9e-60 235.3 213 56.3
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 8.4e-60 234.6 226 52.7
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 1.1e-59 234.2 253 47.8
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 1.4e-59 233.8 230 50.4
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 1.9e-59 233.4 214 54.2
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 3.2e-59 232.6 254 51.6
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 4.2e-59 232.3 229 50.7
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 1.2e-58 230.7 214 54.2
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 6.0e-58 228.4 227 50.7
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 5.1e-57 225.3 219 49.3
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 5.1e-57 225.3 251 45.4
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 5.1e-57 225.3 226 50.0
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 8.7e-57 224.6 227 50.2
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 1.5e-56 223.8 202 53.0
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.5e-56 223.8 226 50.0
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 8.1e-55 218.0 267 46.4
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 1.1e-54 217.6 211 50.7
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 9.0e-54 214.5 215 48.4
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 2.7e-50 203.0 242 44.2
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 9.6e-48 194.5 186 51.6
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 2.1e-47 193.4 208 47.6
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 1.4e-46 190.7 309 37.5
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 5.8e-45 185.3 216 43.5
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 6.5e-44 181.8 148 61.5
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 1.1e-43 181.0 206 49.0
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 1.4e-43 180.6 208 43.8
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 3.0e-41 172.9 213 43.7
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 8.7e-41 171.4 183 45.9
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 2.5e-40 169.9 174 50.6
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 6.3e-39 165.2 211 39.8
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 4.1e-38 162.5 162 52.5
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 1.0e-36 157.9 209 37.8
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 1.3e-36 157.5 424 27.8
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 5.0e-36 155.6 170 50.0
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 1.1e-35 154.5 159 47.8
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 1.9e-35 153.7 164 47.0
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.8e-33 147.1 147 52.4
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 4.8e-31 139.0 160 45.0
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 6.9e-30 135.2 229 36.2
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 7.2e-27 125.2 113 54.0
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 2.8e-23 113.2 95 55.8
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 1.6e-18 97.4 220 27.3
ECA238G4657 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.7e-10 70.1 92 35.9
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 3.0e-09 66.6 55 45.5
Hund22393 Selenicereus undatus HOM05D007345 ORTHO05D009277 3.7e-07 59.7 50 54.0
Os12g0636100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 4.8e-07 59.3 99 31.3
Pp3c22_12710 Physcomitrium patens HOM05D001916 ORTHO05D003272 2.4e-06 57.0 123 26.0
HPP92_009818 Vanilla planifolia HOM05D001916 ORTHO05D003272 9.1e-06 55.1 99 30.3


User provided reference genes

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