Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr08g0245391 Lupinus albus HOM05D004452 ORTHO05D005358 6.7e-274 946.8 500 100.0
Lalb_Chr11g0062611 Lupinus albus HOM05D004452 ORTHO05D005358 1.7e-224 782.7 499 81.2
arahy.Tifrunner.gnm1.ann1.Y5ZCTQ Arachis hypogaea HOM05D004452 ORTHO05D005358 1.5e-201 706.4 493 76.3
arahy.Tifrunner.gnm1.ann1.UAD7VL Arachis hypogaea HOM05D004452 ORTHO05D005358 9.8e-201 703.7 493 76.1
Ca_15944_v3 Cicer arietinum L. HOM05D004452 ORTHO05D005358 2.7e-198 695.7 493 73.4
Medtr3g101790 Medicago truncatula HOM05D004452 ORTHO05D005358 1.7e-197 693.0 493 72.4
Lj1g0004160 Lotus japonicus HOM05D004452 ORTHO05D005358 1.1e-196 690.3 493 72.4
Glyma.06G040600 Glycine max HOM05D004452 ORTHO05D005358 4.3e-196 688.3 493 73.6
Glyma.04G039400 Glycine max HOM05D004452 ORTHO05D005358 2.1e-195 686.0 493 73.6
Phvul.009G065600 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 2.0e-193 679.5 493 73.8
Psat5g042600 Pisum sativum HOM05D004452 ORTHO05D005358 2.0e-193 679.5 494 71.5
VMungo1309G1308 Vigna mungo HOM05D004452 ORTHO05D005358 3.5e-190 668.7 493 73.2
TPR.G24198 Trifolium pratense HOM05D004452 ORTHO05D005358 1.0e-189 667.2 496 71.2
Actinidia23285 Actinidia chinensis HOM05D004452 ORTHO05D005358 7.1e-183 644.4 492 70.3
Manes.18G038000 Manihot esculenta HOM05D004452 ORTHO05D005358 7.1e-183 644.4 498 67.7
Cfa018088 Carpinus fangiana HOM05D004452 ORTHO05D005358 1.6e-182 643.3 493 67.3
CiPaw.15G055600 Carya illinoinensis HOM05D004452 ORTHO05D005358 3.3e-180 635.6 493 66.7
QL02p004676 Quercus lobata HOM05D004452 ORTHO05D005358 9.5e-180 634.0 494 69.4
CSS0026728 Camellia sinensis var. sinensis HOM05D004452 ORTHO05D005358 2.8e-179 632.5 461 71.1
Gohir.A05G203100 Gossypium hirsutum HOM05D004452 ORTHO05D005358 4.7e-179 631.7 492 67.3
Duzib093G1704 Durio zibethinus HOM05D004452 ORTHO05D005358 3.1e-178 629.0 492 66.9
Ciclev10000290m.g Citrus clementina HOM05D004452 ORTHO05D005358 5.2e-178 628.2 493 68.0
Prupe.1G434400 Prunus persica HOM05D004452 ORTHO05D005358 5.2e-178 628.2 493 66.1
TAR381G1434 Trochodendron aralioides HOM05D004452 ORTHO05D005358 5.2e-178 628.2 461 68.3
Dinv39307 Davidia involucrata HOM05D004452 ORTHO05D005358 2.6e-177 625.9 461 72.2
Rhsim06G0050800 Rhododendron simsii HOM05D004452 ORTHO05D005358 3.4e-177 625.5 505 66.5
Thecc.08G005800 Theobroma cacao HOM05D004452 ORTHO05D005358 4.4e-177 625.2 493 66.3
Potri.014G028100 Populus trichocarpa HOM05D004452 ORTHO05D005358 5.8e-177 624.8 493 67.3
Dinv35952 Davidia involucrata HOM05D004452 ORTHO05D005358 7.6e-177 624.4 459 73.0
Glyma.17G241800 Glycine max HOM05D004452 ORTHO05D005358 2.9e-176 622.5 499 65.3
CANSAT11G1000 Cannabis sativa HOM05D004452 ORTHO05D005358 8.4e-176 620.9 497 68.2
COL.COLO4_26520 Corchorus olitorius HOM05D004452 ORTHO05D005358 8.4e-176 620.9 499 64.5
vmacro21515 Vaccinium macrocarpon HOM05D004452 ORTHO05D005358 8.4e-176 620.9 461 71.1
Lsat_1_v5_gn_1_21181 Lactuca sativa HOM05D004452 ORTHO05D005358 1.1e-175 620.5 470 68.1
PGR031G1897 Punica granatum HOM05D004452 ORTHO05D005358 1.1e-175 620.5 492 67.5
GSVIVG01009484001 Vitis vinifera HOM05D004452 ORTHO05D005358 1.1e-175 620.5 448 70.3
Sabra14G0019200 Salix brachista HOM05D004452 ORTHO05D005358 2.4e-175 619.4 494 66.4
Eucgr.F02336 Eucalyptus grandis HOM05D004452 ORTHO05D005358 5.4e-175 618.2 462 71.9
Atru.chr13.704 Acer truncatum HOM05D004452 ORTHO05D005358 9.2e-175 617.5 493 66.3
TWI56G0235 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 1.3e-173 613.6 492 68.5
Nn5g30286 Nelumbo nucifera HOM05D004452 ORTHO05D005358 5.1e-173 611.7 461 68.3
TWI36G0852 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 5.1e-173 611.7 493 67.5
Glyma.14G083300 Glycine max HOM05D004452 ORTHO05D005358 6.6e-173 611.3 499 64.9
Phvul.001G022500 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 8.7e-173 610.9 500 63.8
PGSC0003DMG400007967 Solanum tuberosum HOM05D004452 ORTHO05D005358 2.5e-172 609.4 468 69.7
ClCG05G019920 Citrullus lanatus HOM05D004452 ORTHO05D005358 3.3e-172 609.0 491 66.2
Cc10_g04060 Coffea canephora HOM05D004452 ORTHO05D005358 4.3e-172 608.6 465 66.7
MD15G1081700 Malus domestica HOM05D004452 ORTHO05D005358 4.3e-172 608.6 493 64.1
RcHm_v2.0_Chr6g0308041 Rosa chinensis HOM05D004452 ORTHO05D005358 9.6e-172 607.4 493 64.5
FAN15G1326 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.6e-171 606.7 493 65.5
Solyc04g078830.3 Solanum lycopersicum HOM05D004452 ORTHO05D005358 3.6e-171 605.5 468 69.9
FAN27G2914 Fragaria x ananassa HOM05D004452 ORTHO05D005358 6.2e-171 604.7 498 65.7
CsaV3_4G034360 Cucumis sativus L. HOM05D004452 ORTHO05D005358 8.1e-171 604.4 491 65.4
THA.LOC104822853 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 1.1e-170 604.0 496 65.9
MELO3C016756.2 Cucumis melo HOM05D004452 ORTHO05D005358 2.4e-170 602.8 460 68.0
HanXRQChr02g0039511 Helianthus annuus HOM05D004452 ORTHO05D005358 3.1e-170 602.4 468 68.6
CAN.G1030.10 Capsicum annuum HOM05D004452 ORTHO05D005358 4.0e-170 602.1 468 68.2
FvH4_2g34320 Fragaria vesca HOM05D004452 ORTHO05D005358 5.3e-170 601.7 493 65.1
Lj4A59T44 Lonicera japonica HOM05D004452 ORTHO05D005358 5.3e-170 601.7 457 66.3
VMungo0647G1811 Vigna mungo HOM05D004452 ORTHO05D005358 9.0e-170 600.9 500 63.6
DCAR_019448 Daucus carota HOM05D004452 ORTHO05D005358 1.5e-169 600.1 465 70.3
FAN20G1510 Fragaria x ananassa HOM05D004452 ORTHO05D005358 2.0e-169 599.7 493 65.3
Gohir.D05G206300 Gossypium hirsutum HOM05D004452 ORTHO05D005358 9.9e-169 597.4 430 71.9
PSO210G0441 Papaver somniferum HOM05D004452 ORTHO05D005358 1.7e-168 596.7 459 68.2
PSO170G2588 Papaver somniferum HOM05D004452 ORTHO05D005358 2.2e-168 596.3 459 68.4
Nitab4.5_0002760g0030 Nicotiana tabacum HOM05D004452 ORTHO05D005358 2.9e-168 595.9 467 68.7
CiPaw.16G042900 Carya illinoinensis HOM05D004452 ORTHO05D005358 3.8e-168 595.5 462 66.0
Sed0009272 Sechium edule HOM05D004452 ORTHO05D005358 3.8e-168 595.5 491 64.6
Cpa.g.sc49.27 Carica papaya HOM05D004452 ORTHO05D005358 4.9e-168 595.1 487 65.3
Oeu043579.4 Olea europaea HOM05D004452 ORTHO05D005358 8.4e-168 594.3 465 64.1
Gorai.009G212700 Gossypium raimondii HOM05D004452 ORTHO05D005358 7.1e-167 591.3 430 71.2
Nitab4.5_0000287g0200 Nicotiana tabacum HOM05D004452 ORTHO05D005358 9.3e-167 590.9 467 69.0
ECA247G0253 Erigeron canadensis HOM05D004452 ORTHO05D005358 1.6e-166 590.1 473 67.7
MBI06_g02568_MAGBIO Magnolia biondii HOM05D004452 ORTHO05D005358 3.5e-166 589.0 462 65.2
Sc15g0006090 Simmondsia chinensis HOM05D004452 ORTHO05D005358 7.8e-166 587.8 462 65.8
Aqoxy5G01224 Aquilegia oxysepala HOM05D004452 ORTHO05D005358 1.0e-165 587.4 461 64.9
arahy.Tifrunner.gnm1.ann1.IXK305 Arachis hypogaea HOM05D004452 ORTHO05D005358 1.1e-164 583.9 494 62.6
arahy.Tifrunner.gnm1.ann1.VB8FSW Arachis hypogaea HOM05D004452 ORTHO05D005358 1.1e-164 583.9 494 62.6
FAN24G0195 Fragaria x ananassa HOM05D004452 ORTHO05D005358 9.6e-164 580.9 542 59.4
Migut.N02714 Erythranthe guttata HOM05D004452 ORTHO05D005358 1.5e-161 573.5 465 65.8
MSTRG.24335 Avicennia marina HOM05D004452 ORTHO05D005358 6.4e-160 568.2 466 65.9
Hund23866 Selenicereus undatus HOM05D004452 ORTHO05D005358 8.4e-160 567.8 461 65.7
AUR62041892 Chenopodium quinoa HOM05D004452 ORTHO05D005358 1.9e-159 566.6 466 65.2
EL10Ac1g01836 Beta vulgaris HOM05D004452 ORTHO05D005358 5.4e-159 565.1 463 66.3
Peaxi162Scf00252g00221 Petunia axillaris HOM05D004452 ORTHO05D005358 2.1e-158 563.1 462 65.8
CANSAT11G0118 Cannabis sativa HOM05D004452 ORTHO05D005358 2.7e-158 562.8 487 62.2
AL8G17930 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 3.0e-157 559.3 493 61.5
SGA_v2.0_scaffold28G11777 Striga asiatica HOM05D004452 ORTHO05D005358 3.9e-157 558.9 465 62.8
A06p48170 Brassica napus HOM05D004452 ORTHO05D005358 5.1e-157 558.5 493 62.7
CARHR181170 Cardamine hirsuta HOM05D004452 ORTHO05D005358 5.1e-157 558.5 493 62.7
Carub.0008s0587 Capsella rubella HOM05D004452 ORTHO05D005358 8.7e-157 557.8 495 61.0
BcaC06g31738 Brassica carinata HOM05D004452 ORTHO05D005358 4.3e-156 555.4 493 61.5
BraA06t27686Z Brassica rapa HOM05D004452 ORTHO05D005358 4.3e-156 555.4 493 62.5
Thhalv10003147m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 8.1e-155 551.2 495 61.4
AT5G42920 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 1.4e-154 550.4 494 61.1
BcaC02g10792 Brassica carinata HOM05D004452 ORTHO05D005358 1.4e-154 550.4 495 61.8
C04p25060 Brassica napus HOM05D004452 ORTHO05D005358 1.4e-154 550.4 495 61.8
BolC4t24007H Brassica oleracea HOM05D004452 ORTHO05D005358 1.4e-154 550.4 495 61.8
Sp2g07660 Schrenkiella parvula HOM05D004452 ORTHO05D005358 1.8e-154 550.1 494 61.3
Aa31LG9G12980 Aethionema arabicum HOM05D004452 ORTHO05D005358 6.9e-154 548.1 494 60.7
CDE08G0013 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 2.0e-153 546.6 457 60.6
THA.LOC104812571 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 7.6e-153 544.7 496 61.5
SHI08268 Sapria himalayana HOM05D004452 ORTHO05D005358 2.2e-152 543.1 503 58.4
Hma1.2p1_2046F.1_g312410 Hydrangea macrophylla HOM05D004452 ORTHO05D005358 2.3e-149 533.1 496 60.9
ATR1126G044 Amborella trichopoda HOM05D004452 ORTHO05D005358 3.3e-148 529.3 468 59.4
Sc02g0007190 Simmondsia chinensis HOM05D004452 ORTHO05D005358 3.7e-147 525.8 493 60.0
Oeu023860.1 Olea europaea HOM05D004452 ORTHO05D005358 1.4e-146 523.9 466 58.8
CDE04G2017 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 5.7e-140 501.9 411 64.0
Os02g0767100 Oryza sativa ssp. japonica HOM05D004452 ORTHO05D005358 5.3e-138 495.4 459 57.7
Zm00001eb255990 Zea mays HOM05D004452 ORTHO05D005358 1.3e-136 490.7 460 60.0
Thhalv10011479m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 2.2e-136 490.0 463 58.1
AT1G45233 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 5.0e-136 488.8 463 57.9
Sp1g34090 Schrenkiella parvula HOM05D004452 ORTHO05D005358 3.6e-134 482.6 459 57.7
AL1G52910 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 4.6e-134 482.3 461 56.6
Carub.0001s3568 Capsella rubella HOM05D004452 ORTHO05D005358 4.6e-134 482.3 463 56.8
Sed0026470 Sechium edule HOM05D004452 ORTHO05D005358 6.1e-134 481.9 463 57.7
CARHR036370 Cardamine hirsuta HOM05D004452 ORTHO05D005358 5.7e-132 475.3 461 57.3
MSTRG.25087 Avicennia marina HOM05D004452 ORTHO05D005358 1.5e-129 467.2 412 59.7
Aa31sc108G100 Aethionema arabicum HOM05D004452 ORTHO05D005358 2.9e-128 463.0 468 54.3
A10p06900 Brassica napus HOM05D004452 ORTHO05D005358 5.5e-127 458.8 457 54.0
BraA10t42942Z Brassica rapa HOM05D004452 ORTHO05D005358 1.2e-126 457.6 462 55.2
Mapoly0012s0112 Marchantia polymorpha HOM05D004452 ORTHO05D005358 6.1e-126 455.3 461 55.7
BolC6t35279H Brassica oleracea HOM05D004452 ORTHO05D005358 2.5e-119 433.3 459 52.9
BcaC08g42910 Brassica carinata HOM05D004452 ORTHO05D005358 1.8e-117 427.2 461 52.7
C06p01470 Brassica napus HOM05D004452 ORTHO05D005358 3.0e-117 426.4 461 52.7
unitig_26.g10021 Utricularia gibba HOM05D002518 ORTHO05D002630 1.4e-114 417.5 465 52.7
BcaB07g33871 Brassica carinata HOM05D004452 ORTHO05D005358 1.7e-107 394.0 465 49.9
Nn7g37344 Nelumbo nucifera HOM05D004452 ORTHO05D005358 1.7e-107 394.0 296 69.9
AagrBONN_evm.TU.Sc2ySwM_228.4151 Anthoceros agrestis HOM05D004452 ORTHO05D005358 1.2e-105 387.9 462 47.2
SalBow8G0374 Salvia bowleyana HOM05D004452 ORTHO05D005358 9.4e-103 378.3 317 65.9
SalBow8G3632 Salvia bowleyana HOM05D004452 ORTHO05D005358 9.4e-103 378.3 317 65.9
Pp3c7_25670 Physcomitrium patens HOM05D004452 ORTHO05D005358 2.1e-102 377.1 462 45.5
SMO356G0003 Selaginella moellendorffii HOM05D004452 ORTHO05D005358 8.8e-101 371.7 379 55.1
unitig_749.g13678 Utricularia gibba HOM05D004452 ORTHO05D005358 4.9e-99 365.9 440 47.0
SEGI_30975 Sequoiadendron giganteum HOM05D004452 ORTHO05D005358 1.6e-94 350.9 314 60.5
TAR625G1031 Trochodendron aralioides HOM05D004452 ORTHO05D005358 1.2e-86 324.7 261 65.5
AagrBONN_evm.TU.Sc2ySwM_117.2784 Anthoceros agrestis HOM05D004452 ORTHO05D005358 3.1e-85 320.1 459 40.7
HPP92_016717 Vanilla planifolia HOM05D004452 ORTHO05D005358 9.5e-79 298.5 412 43.4
Nn3g17073 Nelumbo nucifera HOM05D004452 ORTHO05D005358 1.6e-78 297.7 221 72.4
Sopen04g032430 Solanum pennellii HOM05D004452 ORTHO05D005358 1.9e-74 284.3 236 66.5
Potri.002G125300 Populus trichocarpa HOM05D004452 ORTHO05D005358 4.1e-74 283.1 321 53.0
MD08G1099200 Malus domestica HOM05D004452 ORTHO05D005358 1.7e-72 277.7 197 72.6
CBR_g24409 Chara braunii HOM05D004452 ORTHO05D005358 1.5e-60 238.0 362 40.3
AUR62038817 Chenopodium quinoa HOM05D004452 ORTHO05D005358 3.9e-56 223.4 178 62.4
MCO13G423 Micromonas commoda HOM05D004452 ORTHO05D005358 7.6e-52 209.1 455 34.5
Cre17.g705550 Chlamydomonas reinhardtii HOM05D004452 ORTHO05D005358 7.9e-49 199.1 435 32.2
SalBow8G2832 Salvia bowleyana HOM05D004452 ORTHO05D005358 9.6e-47 192.2 152 61.8
SalBow8G5418 Salvia bowleyana HOM05D004452 ORTHO05D005358 9.6e-47 192.2 152 61.8
MD08G1099300 Malus domestica HOM05D004452 ORTHO05D005358 1.4e-42 178.3 161 54.0
Aa31LG7G10550 Aethionema arabicum HOM05D004452 ORTHO05D005358 6.5e-27 126.3 93 63.4
Aa31LG7G10540 Aethionema arabicum HOM05D004452 ORTHO05D005358 1.6e-17 95.1 84 65.5
CARHR174670 Cardamine hirsuta HOM05D004452 ORTHO05D005358 5.0e-11 73.6 54 63.0
Actinidia22636 Actinidia chinensis HOM05D004452 ORTHO05D005358 9.7e-07 59.3 67 50.7


User provided reference genes

Program Settings