Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 4.4e-172 607.8 298 100.0
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 7.8e-145 517.3 298 83.6
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 2.8e-142 508.8 293 81.9
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 3.6e-142 508.4 292 81.5
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 6.2e-142 507.7 294 83.3
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 8.0e-142 507.3 294 82.3
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.8e-141 506.1 294 82.7
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 2.3e-141 505.8 294 83.0
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 4.0e-141 505.0 294 83.0
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 5.2e-141 504.6 298 83.6
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.1e-130 470.3 291 75.3
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.1e-130 470.3 289 75.4
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 2.4e-130 469.2 288 76.0
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 7.1e-130 467.6 292 75.3
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 9.2e-130 467.2 292 74.3
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.6e-129 466.5 292 74.0
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.1e-129 466.1 292 74.0
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.5e-129 465.3 292 74.0
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 1.0e-128 463.8 292 73.6
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.0e-128 463.8 292 73.6
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.3e-128 463.4 290 74.1
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 1.7e-128 463.0 292 75.0
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 3.9e-128 461.8 292 72.9
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 5.1e-128 461.5 288 74.7
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 8.6e-128 460.7 292 73.3
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 8.6e-128 460.7 292 73.3
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.1e-127 460.3 296 70.9
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.1e-127 460.3 291 73.9
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.9e-127 459.5 296 70.9
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 1.9e-127 459.5 292 72.6
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 2.5e-127 459.1 296 70.6
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.5e-127 459.1 296 70.6
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.5e-127 459.1 296 70.6
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.5e-127 459.1 293 72.4
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 2.5e-127 459.1 295 71.2
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 3.3e-127 458.8 297 71.0
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 3.3e-127 458.8 292 72.3
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 4.3e-127 458.4 288 74.3
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 4.3e-127 458.4 292 72.6
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 7.3e-127 457.6 289 73.0
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 2.1e-126 456.1 288 74.3
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 4.7e-126 454.9 292 72.6
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 6.2e-126 454.5 292 72.9
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 8.1e-126 454.1 291 72.2
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 8.1e-126 454.1 289 72.0
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 1.1e-125 453.8 292 73.3
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.1e-125 453.8 290 71.7
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.4e-125 453.4 292 70.9
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.8e-125 453.0 291 71.1
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 3.1e-125 452.2 292 72.9
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 4.0e-125 451.8 292 72.6
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 5.2e-125 451.4 292 72.9
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.2e-124 450.3 292 72.6
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.5e-124 449.9 306 69.9
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.5e-124 449.9 311 68.5
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 2.0e-124 449.5 292 70.9
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.0e-124 449.5 290 71.7
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 2.6e-124 449.1 292 72.6
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 4.4e-124 448.4 291 71.1
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 5.8e-124 448.0 278 75.5
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 5.8e-124 448.0 292 71.2
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 2.2e-123 446.0 292 70.9
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.1e-122 443.7 310 68.4
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.4e-122 443.4 292 70.5
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 5.4e-122 441.4 291 71.1
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 4.6e-121 438.3 293 69.6
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 7.8e-121 437.6 293 68.9
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 1.0e-120 437.2 340 62.4
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 1.3e-120 436.8 318 66.7
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 1.7e-120 436.4 293 69.3
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 3.9e-120 435.3 290 70.3
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 8.6e-120 434.1 292 68.8
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 1.1e-119 433.7 290 70.0
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.5e-119 433.3 292 69.2
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 3.3e-119 432.2 290 69.7
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 5.6e-119 431.4 293 68.9
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 5.6e-119 431.4 290 69.7
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 5.6e-119 431.4 290 69.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 9.6e-119 430.6 293 69.6
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 1.1e-117 427.2 289 67.1
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.4e-117 426.0 289 69.6
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 3.1e-117 425.6 292 68.2
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 2.0e-116 422.9 326 63.5
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.7e-115 419.9 293 67.6
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.9e-115 419.1 293 65.9
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 6.4e-115 417.9 261 75.1
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 8.4e-115 417.5 315 64.1
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 5.1e-112 408.3 260 71.9
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 6.6e-112 407.9 291 66.3
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 2.5e-111 406.0 293 65.9
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 9.6e-111 404.1 293 66.2
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 6.4e-107 391.3 293 62.5
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 6.0e-105 384.8 292 64.0
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 4.0e-93 345.5 213 73.7
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 1.9e-90 336.7 289 56.1
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.6e-89 333.6 191 82.2
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 5.7e-87 325.1 290 55.5
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.6e-86 323.6 290 51.7
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 4.8e-86 322.0 198 76.3
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 2.0e-84 316.6 284 54.9
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 2.6e-84 316.2 194 74.2
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 6.7e-72 275.0 189 69.8
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.4e-66 257.3 258 50.4
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 3.5e-60 236.1 158 67.7
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.0e-56 224.6 148 70.9
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 5.7e-55 218.8 152 67.1
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 3.6e-49 199.5 148 66.2
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.8e-46 189.9 143 65.7
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 5.0e-35 152.5 110 68.2
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 8.0e-33 145.2 101 69.3
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.2e-30 137.1 73 89.0
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 5.0e-27 125.9 332 26.8
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.1e-24 116.7 78 70.5
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 1.2e-23 114.8 77 71.4
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.2e-23 114.8 299 27.4
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 3.2e-21 106.7 110 50.0
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.3e-19 100.5 64 67.2
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 3.4e-07 60.1 41 70.7


User provided reference genes

Program Settings