Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr05g0227121 Lupinus albus HOM05D005776 ORTHO05D007333 2.7e-28 127.9 61 100.0
Lalb_Chr09g0333671 Lupinus albus HOM05D005776 ORTHO05D007333 5.7e-18 93.6 89 60.7
Glyma.01G182500 Glycine max HOM05D005776 ORTHO05D007333 2.2e-17 91.7 89 59.6
MELO3C007510.2 Cucumis melo HOM05D005776 ORTHO05D007333 3.7e-17 90.9 89 58.4
CsaV3_6G042720 Cucumis sativus L. HOM05D005776 ORTHO05D007333 3.7e-17 90.9 89 58.4
ClCG01G016400 Citrullus lanatus HOM05D005776 ORTHO05D007333 4.8e-17 90.5 89 57.3
Eucgr.H01941 Eucalyptus grandis HOM05D005776 ORTHO05D007333 4.8e-17 90.5 89 58.4
Glyma.11G060800 Glycine max HOM05D005776 ORTHO05D007333 4.8e-17 90.5 89 58.4
Medtr5g018580 Medicago truncatula HOM05D005776 ORTHO05D007333 4.8e-17 90.5 89 59.6
Cfa004232 Carpinus fangiana HOM05D005776 ORTHO05D007333 6.3e-17 90.1 89 58.4
AUR62009176 Chenopodium quinoa HOM05D005776 ORTHO05D007333 6.3e-17 90.1 89 56.2
Haze_15167 Corylus avellana HOM05D005776 ORTHO05D007333 6.3e-17 90.1 89 58.4
Peaxi162Scf00235g00723 Petunia axillaris HOM05D005776 ORTHO05D007333 6.3e-17 90.1 89 57.3
arahy.Tifrunner.gnm1.ann1.41BUH4 Arachis hypogaea HOM05D005776 ORTHO05D007333 8.2e-17 89.7 89 58.4
arahy.Tifrunner.gnm1.ann1.TE9NQ7 Arachis hypogaea HOM05D005776 ORTHO05D007333 8.2e-17 89.7 89 58.4
Prupe.7G145200 Prunus persica HOM05D005776 ORTHO05D007333 8.2e-17 89.7 89 57.3
Ca_24808_v3 Cicer arietinum L. HOM05D005776 ORTHO05D007333 1.1e-16 89.4 89 58.4
HanXRQChr12g0378471 Helianthus annuus HOM05D005776 ORTHO05D007333 1.1e-16 89.4 89 57.3
Nn6g32162 Nelumbo nucifera HOM05D005776 ORTHO05D007333 1.1e-16 89.4 89 58.4
Phvul.002G023500 Phaseolus vulgaris HOM05D005776 ORTHO05D007333 1.1e-16 89.4 89 58.4
Psat2g163800 Pisum sativum HOM05D005776 ORTHO05D007333 1.1e-16 89.4 89 58.4
TAR628G1436 Trochodendron aralioides HOM05D005776 ORTHO05D007333 1.1e-16 89.4 89 57.3
CANSAT25G0990 Cannabis sativa HOM05D005776 ORTHO05D007333 1.4e-16 89.0 89 58.4
MD15G1273400 Malus domestica HOM05D005776 ORTHO05D007333 1.4e-16 89.0 89 57.3
SalBow1G0426 Salvia bowleyana HOM05D005776 ORTHO05D007333 1.4e-16 89.0 89 58.4
SalBow1G6751 Salvia bowleyana HOM05D005776 ORTHO05D007333 1.4e-16 89.0 89 58.4
Rhsim10G0126200 Rhododendron simsii HOM05D005776 ORTHO05D007333 1.8e-16 88.6 89 57.3
CiPaw.01G029000 Carya illinoinensis HOM05D005776 ORTHO05D007333 2.4e-16 88.2 89 56.2
QL06p044240 Quercus lobata HOM05D005776 ORTHO05D007333 2.4e-16 88.2 88 55.7
Aa31LG6G13780 Aethionema arabicum HOM05D005776 ORTHO05D007333 3.1e-16 87.8 89 55.1
EL10Ac2g03922 Beta vulgaris HOM05D005776 ORTHO05D007333 3.1e-16 87.8 89 56.2
CSS0016523 Camellia sinensis var. sinensis HOM05D005776 ORTHO05D007333 3.1e-16 87.8 89 56.2
CSS0036517 Camellia sinensis var. sinensis HOM05D005776 ORTHO05D007333 3.1e-16 87.8 89 56.2
Cfa017515 Carpinus fangiana HOM05D005776 ORTHO05D007333 3.1e-16 87.8 89 57.3
MD02G1158600 Malus domestica HOM05D005776 ORTHO05D007333 3.1e-16 87.8 89 57.3
Oeu032924.1 Olea europaea HOM05D005776 ORTHO05D007333 3.1e-16 87.8 89 57.3
Actinidia12087 Actinidia chinensis HOM05D005776 ORTHO05D007333 4.1e-16 87.4 89 56.2
Aqoxy6G00958 Aquilegia oxysepala HOM05D005776 ORTHO05D007333 4.1e-16 87.4 89 56.2
Cc07_g19620 Coffea canephora HOM05D005776 ORTHO05D007333 4.1e-16 87.4 89 56.2
PSO541G0480 Papaver somniferum HOM05D001143 ORTHO05D007333 4.1e-16 87.4 88 54.5
MSTRG.3404 Avicennia marina HOM05D005776 ORTHO05D007333 5.3e-16 87.0 89 56.2
AUR62022050 Chenopodium quinoa HOM05D005776 ORTHO05D007333 5.3e-16 87.0 89 55.1
Lsat_1_v5_gn_3_94020 Lactuca sativa HOM05D005776 ORTHO05D007333 5.3e-16 87.0 89 56.2
Lj2g0005971 Lotus japonicus HOM05D005776 ORTHO05D007333 5.3e-16 87.0 89 57.3
MD17G1248400 Malus domestica HOM05D005776 ORTHO05D007333 5.3e-16 87.0 89 56.2
FvH4_1g14520 Fragaria vesca HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 56.2
FAN19G1930 Fragaria x ananassa HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 56.2
FAN23G2656 Fragaria x ananassa HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 56.2
FAN26G3400 Fragaria x ananassa HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 56.2
FAN28G0587 Fragaria x ananassa HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 56.2
Gohir.A03G118600 Gossypium hirsutum HOM05D005776 ORTHO05D007333 6.9e-16 86.7 87 57.5
Gohir.A03G118800 Gossypium hirsutum HOM05D005776 ORTHO05D007333 6.9e-16 86.7 87 57.5
Gohir.D02G141600 Gossypium hirsutum HOM05D005776 ORTHO05D007333 6.9e-16 86.7 87 57.5
Gorai.005G159700 Gossypium raimondii HOM05D005776 ORTHO05D007333 6.9e-16 86.7 87 57.5
PSO675G1056 Papaver somniferum HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 53.9
PGR102G0103 Punica granatum HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 55.1
Thecc.02G289200 Theobroma cacao HOM05D005776 ORTHO05D007333 6.9e-16 86.7 87 57.5
TPR.G29855 Trifolium pratense HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 56.2
unitig_578.g16073 Utricularia gibba HOM05D005776 ORTHO05D007333 6.9e-16 86.7 88 56.8
VMungo1215G2372 Vigna mungo HOM05D005776 ORTHO05D007333 6.9e-16 86.7 89 56.2
GSVIVG01003777001 Vitis vinifera HOM05D005776 ORTHO05D007333 6.9e-16 86.7 88 55.7
COL.COLO4_07276 Corchorus olitorius HOM05D005776 ORTHO05D007333 9.0e-16 86.3 87 57.5
COL.COLO4_13087 Corchorus olitorius HOM05D005776 ORTHO05D007333 9.0e-16 86.3 87 57.5
Manes.12G094700 Manihot esculenta HOM05D005776 ORTHO05D007333 9.0e-16 86.3 89 56.2
Sed0000268 Sechium edule HOM05D005776 ORTHO05D007333 9.0e-16 86.3 89 55.1
THA.LOC104804218 Tarenaya hassleriana HOM05D005776 ORTHO05D007333 9.0e-16 86.3 89 55.1
Ah.10g034500 Amaranthus hybridus HOM05D000575 ORTHO05D004448 1.2e-15 85.9 89 53.9
Ciclev10026303m.g Citrus clementina HOM05D005776 ORTHO05D007333 1.2e-15 85.9 89 55.1
Nitab4.5_0000984g0010 Nicotiana tabacum HOM05D005776 ORTHO05D007333 1.2e-15 85.9 89 53.9
Hund05302 Selenicereus undatus HOM05D005776 ORTHO05D007333 1.2e-15 85.9 89 55.1
vmacro11025 Vaccinium macrocarpon HOM05D005776 ORTHO05D007333 1.2e-15 85.9 89 55.1
Atru.chr3.470 Acer truncatum HOM05D005776 ORTHO05D007333 1.5e-15 85.5 89 55.1
CDE01G0348 Ceratophyllum demersum HOM05D001852 ORTHO05D001989 1.5e-15 85.5 89 56.2
Duzib251G0151 Durio zibethinus HOM05D005776 ORTHO05D007333 1.5e-15 85.5 87 56.3
ECA246G4011 Erigeron canadensis HOM05D005776 ORTHO05D007333 1.5e-15 85.5 89 55.1
Lj4A136T80 Lonicera japonica HOM05D005776 ORTHO05D007333 1.5e-15 85.5 89 55.1
Os03g0767500 Oryza sativa ssp. japonica HOM05D005776 ORTHO05D007333 1.5e-15 85.5 89 55.1
RcHm_v2.0_Chr2g0103261 Rosa chinensis HOM05D005776 ORTHO05D007333 2.0e-15 85.1 89 55.1
TWI09G1011 Tripterygium wilfordii HOM05D005776 ORTHO05D007333 2.0e-15 85.1 89 55.1
MBI16_g29183_MAGBIO Magnolia biondii HOM05D005776 ORTHO05D007333 2.6e-15 84.7 88 54.5
SGA_v2.0_scaffold10G05128 Striga asiatica HOM05D005776 ORTHO05D007333 2.6e-15 84.7 88 55.7
CAN.G337.59 Capsicum annuum HOM05D005776 ORTHO05D007333 3.4e-15 84.3 89 52.8
Migut.K00840 Erythranthe guttata HOM05D005776 ORTHO05D007333 3.4e-15 84.3 89 53.9
Hma1.2p1_0739F.1_g211300 Hydrangea macrophylla HOM05D005776 ORTHO05D007333 3.4e-15 84.3 89 53.9
A01p02000 Brassica napus HOM05D005776 ORTHO05D007333 4.5e-15 84.0 89 53.9
C01p02180 Brassica napus HOM05D005776 ORTHO05D007333 4.5e-15 84.0 89 53.9
BolC1t00210H Brassica oleracea HOM05D005776 ORTHO05D007333 4.5e-15 84.0 89 53.9
BraA01t00188Z Brassica rapa HOM05D005776 ORTHO05D007333 4.5e-15 84.0 89 53.9
Carub.0007s0339 Capsella rubella HOM05D005776 ORTHO05D007333 4.5e-15 84.0 89 53.9
Sabra07G0030000 Salix brachista HOM05D005776 ORTHO05D007333 5.9e-15 83.6 89 55.1
Zm00001eb213990 Zea mays HOM05D005776 ORTHO05D007333 5.9e-15 83.6 89 52.8
ATR0733G088 Amborella trichopoda HOM05D005776 ORTHO05D007333 7.7e-15 83.2 89 51.7
Sc15g0005670 Simmondsia chinensis HOM05D005776 ORTHO05D007333 7.7e-15 83.2 89 53.9
AL7G14000 Arabidopsis lyrata HOM05D005776 ORTHO05D007333 1.0e-14 82.8 89 52.8
CARHR245310 Cardamine hirsuta HOM05D005776 ORTHO05D007333 1.0e-14 82.8 89 53.9
Sp7g34590 Schrenkiella parvula HOM05D005776 ORTHO05D007333 1.0e-14 82.8 89 52.8
Solyc07g064940.3 Solanum lycopersicum HOM05D005776 ORTHO05D007333 1.0e-14 82.8 89 50.6
CDE02G0814 Ceratophyllum demersum HOM05D005776 ORTHO05D007333 1.7e-14 82.0 89 53.9
Thhalv10026051m.g Eutrema salsugineum HOM05D005776 ORTHO05D007333 1.7e-14 82.0 89 52.8
Potri.007G034400 Populus trichocarpa HOM05D005776 ORTHO05D007333 1.7e-14 82.0 89 57.3
Sopen07g033140 Solanum pennellii HOM05D005776 ORTHO05D007333 1.7e-14 82.0 89 50.6
PGSC0003DMG400022206 Solanum tuberosum HOM05D005776 ORTHO05D007333 2.2e-14 81.6 89 49.4
Nitab4.5_0002826g0010 Nicotiana tabacum HOM05D005776 ORTHO05D007333 5.0e-14 80.5 87 50.6
HPP92_012224 Vanilla planifolia HOM05D005776 ORTHO05D007333 5.0e-14 80.5 89 52.8
AT4G37200 Arabidopsis thaliana HOM05D005776 ORTHO05D007333 1.1e-13 79.3 89 50.6
Cpa.g.sc15.62 Carica papaya HOM05D005776 ORTHO05D007333 5.5e-13 77.0 89 50.6
TAR625G0250 Trochodendron aralioides HOM05D005776 ORTHO05D007333 1.6e-12 75.5 89 53.9
Duzib268G1673 Durio zibethinus HOM05D005776 ORTHO05D007333 7.9e-12 73.2 87 50.6
CSS0005566 Camellia sinensis var. sinensis HOM05D005776 ORTHO05D007333 1.5e-10 68.9 85 49.4
Mapoly0011s0067 Marchantia polymorpha HOM05D005776 ORTHO05D007333 1.7e-09 65.5 87 42.5
SMO329G0044 Selaginella moellendorffii HOM05D005776 ORTHO05D007333 2.2e-09 65.1 89 40.4
Pp3c22_350 Physcomitrium patens HOM05D005776 ORTHO05D007333 4.1e-08 60.8 87 41.4
BolC1t00269H Brassica oleracea HOM05D005776 ORTHO05D007333 5.3e-08 60.5 75 48.0
AagrBONN_evm.TU.Sc2ySwM_344.5430 Anthoceros agrestis HOM05D005776 ORTHO05D007333 2.6e-07 58.2 90 42.2


User provided reference genes

Program Settings