Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 2.7e-82 308.5 146 100.0
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 1.9e-75 285.8 146 92.5
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 1.6e-71 272.7 146 87.7
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 2.4e-70 268.9 146 87.7
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 3.4e-69 265.0 146 86.3
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 4.9e-68 261.2 146 84.2
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 1.9e-67 259.2 146 83.6
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 9.3e-67 256.9 146 83.6
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 6.0e-66 254.2 146 84.2
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 1.0e-65 253.4 146 82.9
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 2.3e-65 252.3 146 82.2
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 2.3e-65 252.3 145 82.1
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 5.1e-65 251.1 146 79.5
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 1.9e-64 249.2 149 82.6
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 2.5e-64 248.8 146 82.9
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 2.5e-64 248.8 146 82.9
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 3.3e-64 248.4 146 81.5
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 4.3e-64 248.1 146 80.1
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 7.3e-64 247.3 146 80.1
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 9.6e-64 246.9 149 80.5
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 9.6e-64 246.9 146 80.1
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 2.1e-63 245.7 146 77.4
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 2.8e-63 245.4 147 81.6
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 3.6e-63 245.0 147 81.0
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 6.2e-63 244.2 146 79.5
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 6.2e-63 244.2 146 77.4
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 6.2e-63 244.2 146 79.5
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.1e-62 243.4 146 78.1
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 1.1e-62 243.4 144 80.6
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 1.1e-62 243.4 146 80.1
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.8e-62 242.7 146 77.4
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 3.1e-62 241.9 146 80.1
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 6.9e-62 240.7 146 76.7
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 9.0e-62 240.4 147 76.9
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 1.2e-61 240.0 146 78.8
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.0e-61 239.2 146 79.5
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 2.0e-61 239.2 145 78.6
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 4.5e-61 238.0 147 76.2
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 5.8e-61 237.7 118 92.4
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 5.8e-61 237.7 133 85.0
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 5.8e-61 237.7 146 75.3
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 9.9e-61 236.9 126 85.7
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 1.3e-60 236.5 149 77.2
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 1.7e-60 236.1 140 80.0
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 1.7e-60 236.1 125 86.4
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 3.8e-60 235.0 118 90.7
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 3.8e-60 235.0 116 91.4
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 6.4e-60 234.2 118 89.0
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 6.4e-60 234.2 118 89.0
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 8.4e-60 233.8 148 75.0
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 8.4e-60 233.8 131 81.7
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 1.1e-59 233.4 148 74.3
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 1.1e-59 233.4 142 78.9
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 1.1e-59 233.4 120 86.7
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 1.4e-59 233.0 147 75.5
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 1.4e-59 233.0 126 83.3
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 2.4e-59 232.3 113 92.0
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 2.4e-59 232.3 113 92.0
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 3.2e-59 231.9 126 83.3
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 3.2e-59 231.9 150 72.7
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 3.2e-59 231.9 146 74.0
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 3.2e-59 231.9 116 88.8
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 4.2e-59 231.5 137 78.1
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 5.4e-59 231.1 145 73.1
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 5.4e-59 231.1 120 86.7
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 5.4e-59 231.1 137 78.8
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 5.4e-59 231.1 137 78.8
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 5.4e-59 231.1 116 89.7
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 7.1e-59 230.7 137 78.8
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 7.1e-59 230.7 132 81.1
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 1.2e-58 229.9 118 87.3
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 1.2e-58 229.9 146 72.6
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 2.1e-58 229.2 148 74.3
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 2.7e-58 228.8 148 74.3
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 2.7e-58 228.8 116 87.9
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 2.7e-58 228.8 116 87.9
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 6.0e-58 227.6 120 85.0
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 6.0e-58 227.6 146 74.0
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 6.0e-58 227.6 151 74.2
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 6.0e-58 227.6 160 69.4
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 6.0e-58 227.6 156 73.1
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 7.9e-58 227.3 120 84.2
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 7.9e-58 227.3 120 84.2
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 7.9e-58 227.3 120 84.2
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 1.3e-57 226.5 147 74.8
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 1.8e-57 226.1 150 74.0
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 3.0e-57 225.3 145 73.1
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 3.9e-57 224.9 115 91.3
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 5.1e-57 224.6 147 71.4
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 6.7e-57 224.2 118 85.6
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 1.1e-56 223.4 119 83.2
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 1.1e-56 223.4 172 64.0
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 1.1e-56 223.4 172 64.0
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 4.3e-56 221.5 228 55.7
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 1.3e-55 219.9 116 84.5
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 2.8e-55 218.8 131 76.3
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 2.8e-55 218.8 131 76.3
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 1.4e-54 216.5 135 73.3
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 1.8e-54 216.1 115 83.5
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 2.4e-54 215.7 132 74.2
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 3.1e-54 215.3 144 73.6
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 4.0e-54 214.9 142 72.5
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 9.0e-54 213.8 105 90.5
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 1.2e-53 213.4 105 90.5
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 1.3e-52 209.9 112 81.2
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 2.2e-52 209.1 139 71.9
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 3.8e-52 208.4 114 81.6
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 8.4e-52 207.2 104 87.5
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 1.4e-51 206.5 147 66.7
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 1.9e-51 206.1 114 80.7
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 3.5e-50 201.8 119 73.1
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 1.8e-49 199.5 105 84.8
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 3.0e-49 198.7 138 73.2
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.5e-48 195.7 104 81.7
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 7.4e-48 194.1 104 80.8
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 7.4e-48 194.1 143 66.4
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 8.2e-47 190.7 157 65.6
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 1.4e-46 189.9 128 68.0
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.2e-45 186.8 145 66.9
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 7.6e-45 184.1 105 83.8
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.9e-44 182.2 149 65.1
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 2.5e-43 179.1 111 75.7
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 1.6e-42 176.4 91 81.3
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 2.5e-40 169.1 113 71.7
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 1.3e-39 166.8 87 88.5
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 1.4e-38 163.3 152 57.9
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 1.3e-36 156.8 78 84.6
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 6.5e-36 154.5 83 84.3
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 6.1e-34 147.9 101 73.3
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 6.5e-28 127.9 104 59.6
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 2.7e-26 122.5 86 69.8
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 3.6e-26 122.1 61 83.6
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 7.9e-26 120.9 64 81.2
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 1.4e-19 100.1 62 67.7
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 9.4e-19 97.4 52 82.7
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 1.0e-17 94.0 43 86.0
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 2.0e-16 89.7 65 70.8
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.8e-14 83.2 52 69.2
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 1.8e-14 83.2 76 65.8
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 2.5e-11 72.8 38 89.5
CARHR102660 Cardamine hirsuta HOM05D005035 ORTHO05D006141 1.6e-10 70.1 42 73.8
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.1e-10 69.7 40 72.5
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.6e-10 68.9 49 67.3
Dinv33674 Davidia involucrata HOM05D005035 ORTHO05D006141 1.2e-08 63.9 47 66.0
CSS0011814 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.4e-06 57.0 30 73.3


User provided reference genes

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