Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0149801 Lupinus albus HOM05D001174 ORTHO05D001003 4.3e-77 291.2 141 100.0
Lalb_Chr06g0168761 Lupinus albus HOM05D001174 ORTHO05D001003 8.7e-54 213.8 113 87.6
Lj5g0023059 Lotus japonicus HOM05D001174 ORTHO05D001003 1.6e-52 209.5 113 87.6
Medtr1g076990 Medicago truncatula HOM05D001174 ORTHO05D001003 5.5e-48 194.5 113 79.6
TPR.G16615 Trifolium pratense HOM05D001174 ORTHO05D001003 1.2e-47 193.4 113 79.6
Ca_09902_v3 Cicer arietinum L. HOM05D001174 ORTHO05D001003 1.6e-47 193.0 113 80.5
arahy.Tifrunner.gnm1.ann1.LCQF6T Arachis hypogaea HOM05D001174 ORTHO05D001003 3.0e-46 188.7 115 79.1
arahy.Tifrunner.gnm1.ann1.TP2IXW Arachis hypogaea HOM05D001174 ORTHO05D001003 3.0e-46 188.7 115 79.1
Phvul.007G114100 Phaseolus vulgaris HOM05D001174 ORTHO05D001003 1.1e-45 186.8 114 80.7
Psat4g172080 Pisum sativum HOM05D001174 ORTHO05D001003 1.1e-45 186.8 113 76.1
Glyma.10G176200 Glycine max HOM05D001174 ORTHO05D001003 2.5e-45 185.7 114 78.9
Glyma.20G214100 Glycine max HOM05D001174 ORTHO05D001003 9.6e-45 183.7 114 78.1
Cfa020921 Carpinus fangiana HOM05D001174 ORTHO05D001003 4.9e-41 171.4 111 71.2
Haze_19356 Corylus avellana HOM05D001174 ORTHO05D001003 7.9e-39 164.1 111 68.5
QL10p037912 Quercus lobata HOM05D001174 ORTHO05D001003 1.0e-38 163.7 112 70.5
Sopen04g002330 Solanum pennellii HOM05D001174 ORTHO05D001003 1.5e-37 159.8 112 68.8
CSS0035790 Camellia sinensis var. sinensis HOM05D001174 ORTHO05D001003 3.3e-37 158.7 111 70.3
CiPaw.16G119600 Carya illinoinensis HOM05D001174 ORTHO05D001003 3.3e-37 158.7 118 65.3
Dinv26829 Davidia involucrata HOM05D001174 ORTHO05D001003 5.7e-37 157.9 111 68.5
Peaxi162Scf00003g02037 Petunia axillaris HOM05D001174 ORTHO05D001003 5.7e-37 157.9 112 69.6
Actinidia12241 Actinidia chinensis HOM05D001174 ORTHO05D001003 9.6e-37 157.1 111 66.7
Peaxi162Scf00577g00006 Petunia axillaris HOM05D001174 ORTHO05D001003 1.3e-36 156.8 111 67.6
COL.COLO4_35284 Corchorus olitorius HOM05D001174 ORTHO05D001003 2.1e-36 156.0 104 71.2
Nitab4.5_0002209g0010 Nicotiana tabacum HOM05D001174 ORTHO05D001003 2.1e-36 156.0 109 67.0
Sc06g0005280 Simmondsia chinensis HOM05D001174 ORTHO05D001003 2.8e-36 155.6 111 65.8
SGA_v2.0_scaffold12G06273 Striga asiatica HOM05D001174 ORTHO05D001003 2.8e-36 155.6 112 67.0
vmacro18689 Vaccinium macrocarpon HOM05D001174 ORTHO05D001003 2.8e-36 155.6 112 67.0
Cpa.g.sc138.43 Carica papaya HOM05D001174 ORTHO05D001003 6.3e-36 154.5 134 59.0
Nitab4.5_0003104g0040 Nicotiana tabacum HOM05D001174 ORTHO05D001003 6.3e-36 154.5 109 67.0
Thecc.01G146300 Theobroma cacao HOM05D001174 ORTHO05D001003 8.2e-36 154.1 104 69.2
Solyc04g007270.3 Solanum lycopersicum HOM05D001174 ORTHO05D001003 1.1e-35 153.7 114 65.8
TPR.G5813 Trifolium pratense HOM05D001174 ORTHO05D001003 1.1e-35 153.7 112 66.1
TAR381G0430 Trochodendron aralioides HOM05D001174 ORTHO05D001003 1.1e-35 153.7 111 66.7
CAN.G7.10 Capsicum annuum HOM05D001174 ORTHO05D001003 1.4e-35 153.3 112 65.2
AUR62006960 Chenopodium quinoa HOM05D001174 ORTHO05D001003 1.4e-35 153.3 111 63.1
Ciclev10025026m.g Citrus clementina HOM05D001174 ORTHO05D001003 2.4e-35 152.5 111 64.9
PGSC0003DMG400006006 Solanum tuberosum HOM05D001174 ORTHO05D001003 2.4e-35 152.5 116 64.7
SGA_v2.0_scaffold51G18843 Striga asiatica HOM05D001174 ORTHO05D001003 2.4e-35 152.5 112 65.2
GSVIVG01000247001 Vitis vinifera HOM05D001174 ORTHO05D001003 2.4e-35 152.5 111 65.8
Migut.H02544 Erythranthe guttata HOM05D001174 ORTHO05D001003 4.1e-35 151.8 113 68.1
Atru.chr3.1455 Acer truncatum HOM05D001174 ORTHO05D001003 9.0e-35 150.6 112 64.3
Manes.13G153700 Manihot esculenta HOM05D001174 ORTHO05D001003 9.0e-35 150.6 111 66.7
Sabra04G0083300 Salix brachista HOM05D001174 ORTHO05D001003 9.0e-35 150.6 114 64.9
AUR62000609 Chenopodium quinoa HOM05D001174 ORTHO05D001003 2.0e-34 149.4 111 60.4
Cc00_g27260 Coffea canephora HOM05D001174 ORTHO05D001003 4.5e-34 148.3 118 63.6
TWI79G0263 Tripterygium wilfordii HOM05D001174 ORTHO05D001003 4.5e-34 148.3 111 64.0
EL10Ac4g09733 Beta vulgaris HOM05D001174 ORTHO05D001003 5.9e-34 147.9 111 59.5
Gohir.A10G158722 Gossypium hirsutum HOM05D001174 ORTHO05D001003 3.8e-33 145.2 105 68.6
Lsat_1_v5_gn_3_120241 Lactuca sativa HOM05D001174 ORTHO05D001003 3.8e-33 145.2 112 63.4
MSTRG.23235 Avicennia marina HOM05D001174 ORTHO05D001003 5.0e-33 144.8 140 55.7
Gohir.D10G109800 Gossypium hirsutum HOM05D001174 ORTHO05D001003 5.0e-33 144.8 105 67.6
Gorai.011G120900 Gossypium raimondii HOM05D001174 ORTHO05D001003 5.0e-33 144.8 105 67.6
Potri.004G134700 Populus trichocarpa HOM05D001174 ORTHO05D001003 5.0e-33 144.8 121 60.3
Potri.T045600 Populus trichocarpa HOM05D001174 ORTHO05D001003 5.0e-33 144.8 115 64.3
CANSAT78G2060 Cannabis sativa HOM05D001174 ORTHO05D001003 8.5e-33 144.1 106 64.2
PGR119G0702 Punica granatum HOM05D001174 ORTHO05D001003 8.5e-33 144.1 112 64.3
Duzib147G0032 Durio zibethinus HOM05D001174 ORTHO05D001003 1.4e-32 143.3 111 64.0
TWI31G0341 Tripterygium wilfordii HOM05D001174 ORTHO05D001003 1.4e-32 143.3 111 64.9
Ca_25248_v3 Cicer arietinum L. HOM05D001174 ORTHO05D001003 2.5e-32 142.5 114 64.9
Oeu046361.1 Olea europaea HOM05D001174 ORTHO05D001003 2.5e-32 142.5 113 62.8
Prupe.4G288800 Prunus persica HOM05D001174 ORTHO05D001003 3.2e-32 142.1 107 67.3
Sabra19G0000300 Salix brachista HOM05D001174 ORTHO05D001003 7.2e-32 141.0 116 60.3
Sabra19G0012500 Salix brachista HOM05D001174 ORTHO05D001003 7.2e-32 141.0 116 60.3
CsaV3_4G029980 Cucumis sativus L. HOM05D001174 ORTHO05D001003 1.2e-31 140.2 122 58.2
FAN19G1419 Fragaria x ananassa HOM05D001174 ORTHO05D001003 1.2e-31 140.2 110 62.7
RcHm_v2.0_Chr3g0485271 Rosa chinensis HOM05D001174 ORTHO05D001003 1.2e-31 140.2 111 64.0
FAN23G0797 Fragaria x ananassa HOM05D001174 ORTHO05D001003 1.6e-31 139.8 110 62.7
MELO3C003278.2 Cucumis melo HOM05D001174 ORTHO05D001003 2.7e-31 139.0 120 58.3
Ah.02g118200 Amaranthus hybridus HOM05D001174 ORTHO05D001003 3.6e-31 138.7 112 60.7
Eucgr.I00019 Eucalyptus grandis HOM05D001174 ORTHO05D001003 3.6e-31 138.7 115 60.9
FAN26G0168 Fragaria x ananassa HOM05D001174 ORTHO05D001003 4.6e-31 138.3 110 61.8
FAN28G1665 Fragaria x ananassa HOM05D001174 ORTHO05D001003 4.6e-31 138.3 110 61.8
ECA240G2300 Erigeron canadensis HOM05D001174 ORTHO05D001003 6.1e-31 137.9 119 58.8
HanXRQChr13g0422081 Helianthus annuus HOM05D001174 ORTHO05D001003 1.3e-30 136.7 111 59.5
MD15G1141000 Malus domestica HOM05D001174 ORTHO05D001003 2.3e-30 136.0 112 59.8
Phvul.011G004000 Phaseolus vulgaris HOM05D001174 ORTHO05D001003 3.0e-30 135.6 104 67.3
MBI03_g39996_MAGBIO Magnolia biondii HOM05D001174 ORTHO05D001003 6.7e-30 134.4 115 60.9
HanXRQChr03g0091961 Helianthus annuus HOM05D001174 ORTHO05D001003 8.7e-30 134.0 111 58.6
PSO210G1502 Papaver somniferum HOM05D001174 ORTHO05D001003 8.7e-30 134.0 111 58.6
VMungo1127G0395 Vigna mungo HOM05D001174 ORTHO05D001003 8.7e-30 134.0 104 66.3
Oeu054206.1 Olea europaea HOM05D001174 ORTHO05D001003 1.9e-29 132.9 111 57.7
PSO761G0025 Papaver somniferum HOM05D001174 ORTHO05D001003 2.5e-29 132.5 111 58.6
Psat1g113200 Pisum sativum HOM05D001174 ORTHO05D001003 9.7e-29 130.6 109 67.0
Lj4C822T3 Lonicera japonica HOM05D001174 ORTHO05D001003 1.3e-28 130.2 101 66.3
Lj3g0008343 Lotus japonicus HOM05D001174 ORTHO05D001003 2.4e-27 125.9 104 63.5
DCAR_013187 Daucus carota HOM05D001174 ORTHO05D001003 4.1e-27 125.2 112 57.1
DCAR_013188 Daucus carota HOM05D001174 ORTHO05D001003 4.1e-27 125.2 112 57.1
Dinv22066 Davidia involucrata HOM05D001174 ORTHO05D001003 4.1e-27 125.2 141 48.2
Glyma.12G003300 Glycine max HOM05D001174 ORTHO05D001003 9.1e-27 124.0 104 60.6
arahy.Tifrunner.gnm1.ann1.F4SVGY Arachis hypogaea HOM05D001174 ORTHO05D001003 1.2e-26 123.6 113 59.3
Glyma.09G233500 Glycine max HOM05D001174 ORTHO05D001003 1.2e-26 123.6 104 60.6
arahy.Tifrunner.gnm1.ann1.NM7VB5 Arachis hypogaea HOM05D001174 ORTHO05D001003 1.5e-26 123.2 113 59.3
CDE05G0825 Ceratophyllum demersum HOM05D001174 ORTHO05D001003 1.0e-25 120.6 110 59.1
Aqoxy6G00024 Aquilegia oxysepala HOM05D001174 ORTHO05D001003 8.5e-25 117.5 116 51.7
Medtr4g035550 Medicago truncatula HOM05D001174 ORTHO05D001003 8.5e-25 117.5 111 54.1
TPR.G15121 Trifolium pratense HOM05D001174 ORTHO05D001003 1.1e-24 117.1 104 60.6
Ca_00234_v3 Cicer arietinum L. HOM05D001174 ORTHO05D001003 3.2e-24 115.5 104 59.6
Thecc.08G166500 Theobroma cacao HOM05D001174 ORTHO05D001003 7.2e-24 114.4 114 57.9
PGR102G2196 Punica granatum HOM05D001174 ORTHO05D001003 9.4e-24 114.0 106 56.6
GSVIVG01037120001 Vitis vinifera HOM05D001174 ORTHO05D001003 4.6e-23 111.7 113 54.9
SHI38347 Sapria himalayana HOM05D001174 ORTHO05D001003 1.0e-22 110.5 104 54.8
CDE05G3524 Ceratophyllum demersum HOM05D001174 ORTHO05D001003 2.3e-22 109.4 105 57.1
Cpa.g.sc249.16 Carica papaya HOM05D001174 ORTHO05D001003 5.1e-22 108.2 110 54.5
Potri.013G092000 Populus trichocarpa HOM05D001174 ORTHO05D001003 5.1e-22 108.2 107 54.2
HPP92_001195 Vanilla planifolia HOM05D001174 ORTHO05D001003 1.1e-21 107.1 127 48.0
CARHR032870 Cardamine hirsuta HOM05D001174 ORTHO05D001003 1.5e-21 106.7 115 53.0
Eucgr.F04095 Eucalyptus grandis HOM05D001174 ORTHO05D001003 1.5e-21 106.7 107 53.3
AL1G47810 Arabidopsis lyrata HOM05D001174 ORTHO05D001003 7.4e-21 104.4 115 52.2
AT1G33420 Arabidopsis thaliana HOM05D001174 ORTHO05D001003 1.7e-20 103.2 142 44.4
Carub.0001s3162 Capsella rubella HOM05D001174 ORTHO05D001003 1.7e-20 103.2 120 49.2
Sabra13G0072500 Salix brachista HOM05D001174 ORTHO05D001003 1.7e-20 103.2 107 52.3
THA.LOC104813080 Tarenaya hassleriana HOM05D001174 ORTHO05D001003 1.7e-20 103.2 118 53.4
Thhalv10006958m.g Eutrema salsugineum HOM05D001174 ORTHO05D001003 1.4e-19 100.1 116 51.7
Gohir.A08G231000 Gossypium hirsutum HOM05D001174 ORTHO05D001003 1.8e-19 99.8 113 54.0
SHI16846 Sapria himalayana HOM05D001174 ORTHO05D001003 1.8e-19 99.8 108 51.9
Duzib177G1126 Durio zibethinus HOM05D001174 ORTHO05D001003 5.3e-19 98.2 111 55.0
HanXRQChr10g0295191 Helianthus annuus HOM05D000712 ORTHO05D013991 6.9e-19 97.8 80 57.5
Sp1g28880 Schrenkiella parvula HOM05D001174 ORTHO05D001003 9.1e-19 97.4 115 52.2
Gohir.D08G251400 Gossypium hirsutum HOM05D001174 ORTHO05D001003 1.2e-18 97.1 113 52.2
Gorai.004G268100 Gossypium raimondii HOM05D001174 ORTHO05D001003 1.2e-18 97.1 113 53.1
Lalb_Chr15g0079801 Lupinus albus HOM05D001174 ORTHO05D001003 1.5e-18 96.7 108 50.0
Aa31LG9G11790 Aethionema arabicum HOM05D001174 ORTHO05D001003 2.6e-18 95.9 117 49.6
Prupe.8G002100 Prunus persica HOM05D001174 ORTHO05D001003 2.6e-18 95.9 105 54.3
Haze_14016 Corylus avellana HOM05D001174 ORTHO05D001003 7.7e-18 94.4 118 49.2
Manes.17G016200 Manihot esculenta HOM05D001174 ORTHO05D001003 1.3e-17 93.6 113 49.6
Cfa021493 Carpinus fangiana HOM05D001174 ORTHO05D001003 5.0e-17 91.7 119 48.7
Lj7C415T12 Lonicera japonica HOM05D001174 ORTHO05D001003 1.1e-16 90.5 115 48.7
MD05G1001000 Malus domestica HOM05D001174 ORTHO05D001003 3.2e-16 89.0 105 53.3
FAN19G2507 Fragaria x ananassa HOM05D001174 ORTHO05D001003 9.4e-16 87.4 115 48.7
FvH4_2g00220 Fragaria vesca HOM05D001174 ORTHO05D001003 2.1e-15 86.3 106 50.0
RcHm_v2.0_Chr6g0249511 Rosa chinensis HOM05D001174 ORTHO05D001003 3.6e-15 85.5 109 47.7
FAN24G1382 Fragaria x ananassa HOM05D001174 ORTHO05D001003 4.7e-15 85.1 106 50.0
FAN20G2593 Fragaria x ananassa HOM05D001174 ORTHO05D001003 7.9e-15 84.3 106 49.1
Os01g0877500 Oryza sativa ssp. japonica HOM05D001174 ORTHO05D001003 1.1e-13 80.5 119 43.7
Zm00001eb366330 Zea mays HOM05D001174 ORTHO05D001003 1.1e-13 80.5 119 45.4
QL09p001115 Quercus lobata HOM05D001174 ORTHO05D001003 6.3e-12 74.7 113 41.6
ATR1089G105 Amborella trichopoda HOM05D001174 ORTHO05D001003 9.1e-11 70.9 106 36.8
MD10G1001300 Malus domestica HOM05D001174 ORTHO05D001003 3.8e-09 65.5 116 42.2
unitig_736.g22366 Utricularia gibba HOM05D001174 ORTHO05D001003 5.0e-09 65.1 112 36.6


User provided reference genes

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