Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0149101 Lupinus albus HOM05D003677 ORTHO05D004231 3.1e-85 318.5 172 100.0
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea HOM05D003677 ORTHO05D004231 1.2e-60 236.9 171 73.7
Glyma.20G223000 Glycine max HOM05D003677 ORTHO05D004231 1.7e-59 233.0 171 73.7
Lj5g0022615 Lotus japonicus HOM05D003677 ORTHO05D004231 1.9e-58 229.6 168 72.6
Medtr1g080150 Medicago truncatula HOM05D003677 ORTHO05D004231 3.2e-58 228.8 170 72.9
Psat6g142680 Pisum sativum HOM05D003677 ORTHO05D004231 9.3e-58 227.3 170 71.2
TPR.G9915 Trifolium pratense HOM05D003677 ORTHO05D004231 6.0e-57 224.6 170 71.2
Glyma.10G166200 Glycine max HOM05D003677 ORTHO05D004231 8.1e-54 214.2 172 70.9
Ca_10015_v3 Cicer arietinum L. HOM05D003677 ORTHO05D004231 6.9e-53 211.1 168 69.6
VMungo0720G1875 Vigna mungo HOM05D003677 ORTHO05D004231 9.0e-53 210.7 170 68.2
Potri.019G018900 Populus trichocarpa HOM05D003677 ORTHO05D004231 1.2e-52 210.3 169 66.3
Phvul.008G151836 Phaseolus vulgaris HOM05D003677 ORTHO05D004231 1.5e-52 209.9 170 67.6
Cfa006347 Carpinus fangiana HOM05D003677 ORTHO05D004231 2.0e-52 209.5 173 66.5
Glyma.11G011000 Glycine max HOM05D003677 ORTHO05D004231 2.0e-52 209.5 171 69.0
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea HOM05D003677 ORTHO05D004231 3.4e-52 208.8 230 54.3
Sabra13G0042900 Salix brachista HOM05D003677 ORTHO05D004231 9.9e-52 207.2 171 64.3
Haze_04435 Corylus avellana HOM05D003677 ORTHO05D004231 1.7e-51 206.5 172 66.3
CANSAT54G2642 Cannabis sativa HOM05D003677 ORTHO05D004231 1.1e-50 203.8 160 67.5
CiPaw.02G020400 Carya illinoinensis HOM05D003677 ORTHO05D004231 1.9e-50 203.0 168 66.1
Gohir.A13G167400 Gossypium hirsutum HOM05D003677 ORTHO05D004231 1.9e-50 203.0 164 67.7
Potri.013G046900 Populus trichocarpa HOM05D003677 ORTHO05D004231 3.2e-50 202.2 171 63.7
ClCG11G010570 Citrullus lanatus HOM05D003677 ORTHO05D004231 4.2e-50 201.8 175 66.3
Gohir.A11G247500 Gossypium hirsutum HOM05D003677 ORTHO05D004231 5.4e-50 201.4 164 64.0
Gohir.D11G257800 Gossypium hirsutum HOM05D003677 ORTHO05D004231 7.1e-50 201.1 164 63.4
Gorai.007G276100 Gossypium raimondii HOM05D003677 ORTHO05D004231 7.1e-50 201.1 164 63.4
FAN09G1189 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.6e-49 199.9 178 63.5
PGR004G1803 Punica granatum HOM05D003677 ORTHO05D004231 2.1e-49 199.5 169 64.5
CsaV3_2G009740 Cucumis sativus L. HOM05D003677 ORTHO05D004231 3.5e-49 198.7 173 64.7
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla HOM05D003677 ORTHO05D004231 4.6e-49 198.4 172 66.3
Sed0020318 Sechium edule HOM05D003677 ORTHO05D004231 7.9e-49 197.6 180 60.6
TAR633G1327 Trochodendron aralioides HOM05D003677 ORTHO05D004231 7.9e-49 197.6 174 63.8
Thecc.05G271100 Theobroma cacao HOM05D003677 ORTHO05D004231 1.8e-48 196.4 165 63.0
TWI81G0231 Tripterygium wilfordii HOM05D003677 ORTHO05D004231 1.8e-48 196.4 173 63.6
Migut.F01271 Erythranthe guttata HOM05D003677 ORTHO05D004231 2.3e-48 196.1 166 64.5
Dinv35470 Davidia involucrata HOM05D003677 ORTHO05D004231 3.0e-48 195.7 171 64.9
Rhsim09G0137200 Rhododendron simsii HOM05D003677 ORTHO05D004231 3.9e-48 195.3 182 61.0
Cc02_g08860 Coffea canephora HOM05D003677 ORTHO05D004231 5.1e-48 194.9 160 66.2
Lsat_1_v5_gn_1_9200 Lactuca sativa HOM05D003677 ORTHO05D004231 5.1e-48 194.9 163 69.3
Ciclev10021882m.g Citrus clementina HOM05D003677 ORTHO05D004231 6.7e-48 194.5 169 63.9
Duzib106G0879 Durio zibethinus HOM05D003677 ORTHO05D004231 6.7e-48 194.5 166 62.0
Manes.09G148000 Manihot esculenta HOM05D003677 ORTHO05D004231 6.7e-48 194.5 172 62.2
Sc20g0000650 Simmondsia chinensis HOM05D003677 ORTHO05D004231 6.7e-48 194.5 170 62.4
Actinidia38938 Actinidia chinensis HOM05D003677 ORTHO05D004231 8.7e-48 194.1 168 65.5
COL.COLO4_15475 Corchorus olitorius HOM05D003677 ORTHO05D004231 1.1e-47 193.7 166 62.7
Cpa.g.c35686 Carica papaya HOM05D003677 ORTHO05D004231 1.5e-47 193.4 166 65.1
TPR.G22331 Trifolium pratense HOM05D003677 ORTHO05D004231 1.9e-47 193.0 168 63.7
Actinidia34752 Actinidia chinensis HOM05D003677 ORTHO05D004231 2.5e-47 192.6 168 64.9
MSTRG.24694 Avicennia marina HOM05D003677 ORTHO05D004231 2.5e-47 192.6 170 67.1
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 2.5e-47 192.6 178 61.8
DCAR_009653 Daucus carota HOM05D003677 ORTHO05D004231 5.6e-47 191.4 167 63.5
FAN05G3813 Fragaria x ananassa HOM05D003677 ORTHO05D004231 7.4e-47 191.0 175 63.4
Atru.chr2.953 Acer truncatum HOM05D003677 ORTHO05D004231 9.6e-47 190.7 154 65.6
Lsat_1_v5_gn_2_16040 Lactuca sativa HOM05D003677 ORTHO05D004231 9.6e-47 190.7 176 64.2
Nn1g02804 Nelumbo nucifera HOM05D003677 ORTHO05D004231 9.6e-47 190.7 177 59.9
CDE04G2392 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 2.8e-46 189.1 178 60.1
Atru.chr2.976 Acer truncatum HOM05D003677 ORTHO05D004231 3.7e-46 188.7 154 64.9
PSO832G1483 Papaver somniferum HOM05D003677 ORTHO05D004231 3.7e-46 188.7 190 58.4
RcHm_v2.0_Chr3g0449621 Rosa chinensis HOM05D003677 ORTHO05D004231 4.8e-46 188.3 174 63.8
vmacro10364 Vaccinium macrocarpon HOM05D003677 ORTHO05D004231 4.8e-46 188.3 195 56.4
Atru.chr4.2875 Acer truncatum HOM05D003677 ORTHO05D004231 6.2e-46 188.0 174 59.8
Gorai.013G187700 Gossypium raimondii HOM05D003677 ORTHO05D004231 6.2e-46 188.0 160 64.4
Duzib128G0961 Durio zibethinus HOM05D003677 ORTHO05D004231 1.1e-45 187.2 155 63.2
MD04G1229900 Malus domestica HOM05D003677 ORTHO05D004231 1.1e-45 187.2 168 64.9
MD12G1247300 Malus domestica HOM05D003677 ORTHO05D004231 1.4e-45 186.8 175 62.9
SGA_v2.0_scaffold28G12049 Striga asiatica HOM05D003677 ORTHO05D004231 2.4e-45 186.0 165 64.8
MD12G1247000 Malus domestica HOM05D003677 ORTHO05D004231 3.1e-45 185.7 176 61.9
PSO210G7560 Papaver somniferum HOM05D003677 ORTHO05D004231 3.1e-45 185.7 190 60.5
Aqoxy5G00213 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 4.0e-45 185.3 177 63.8
TAR362G0866 Trochodendron aralioides HOM05D003677 ORTHO05D004231 6.9e-45 184.5 186 58.6
Nn3g19689 Nelumbo nucifera HOM05D003677 ORTHO05D004231 9.0e-45 184.1 169 61.5
EL10Ac4g09010 Beta vulgaris HOM05D003677 ORTHO05D004231 1.2e-44 183.7 167 60.5
MBI07_g16912_MAGBIO Magnolia biondii HOM05D003677 ORTHO05D004231 1.2e-44 183.7 188 55.9
Solyc04g010000.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 1.2e-44 183.7 163 60.7
Nitab4.5_0003780g0080 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.5e-44 183.3 163 59.5
Hund06908 Selenicereus undatus HOM05D003677 ORTHO05D004231 2.0e-44 183.0 164 63.4
ECA238G1929 Erigeron canadensis HOM05D003677 ORTHO05D004231 2.6e-44 182.6 157 61.1
GSVIVG01023509001 Vitis vinifera HOM05D003677 ORTHO05D004231 2.6e-44 182.6 105 84.8
GSVIVG01016104001 Vitis vinifera HOM05D003677 ORTHO05D004231 5.8e-44 181.4 127 74.8
Nitab4.5_0001372g0020 Nicotiana tabacum HOM05D003677 ORTHO05D004231 9.9e-44 180.6 173 57.8
FvH4_6g01880 Fragaria vesca HOM05D003677 ORTHO05D004231 1.3e-43 180.3 184 57.6
Sopen04g005150 Solanum pennellii HOM05D003677 ORTHO05D004231 1.3e-43 180.3 175 58.3
unitig_61.g26069 Utricularia gibba HOM05D003677 ORTHO05D004231 1.3e-43 180.3 147 66.0
Eucgr.H04231 Eucalyptus grandis HOM05D003677 ORTHO05D004231 1.7e-43 179.9 181 60.2
AUR62004836 Chenopodium quinoa HOM05D003677 ORTHO05D004231 2.9e-43 179.1 167 59.3
FAN14G1798 Fragaria x ananassa HOM05D003677 ORTHO05D004231 3.8e-43 178.7 184 56.5
FAN14G5891 Fragaria x ananassa HOM05D003677 ORTHO05D004231 3.8e-43 178.7 184 56.5
CDE07G1504 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 6.4e-43 177.9 124 73.4
Nitab4.5_0000687g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 6.4e-43 177.9 175 58.3
Nitab4.5_0000718g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 8.4e-43 177.6 157 66.2
BcaC05g29937 Brassica carinata HOM05D003677 ORTHO05D004231 1.4e-42 176.8 162 63.0
C05p62750 Brassica napus HOM05D003677 ORTHO05D004231 1.4e-42 176.8 162 63.0
BolC5t34928H Brassica oleracea HOM05D003677 ORTHO05D004231 1.4e-42 176.8 162 63.0
THA.LOC104827474 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 1.4e-42 176.8 165 59.4
ATR0736G218 Amborella trichopoda HOM05D003677 ORTHO05D004231 1.9e-42 176.4 108 80.6
Sopen04g005130 Solanum pennellii HOM05D003677 ORTHO05D004231 1.9e-42 176.4 175 56.6
Prupe.6G350000 Prunus persica HOM05D003677 ORTHO05D004231 2.4e-42 176.0 105 81.9
Gohir.D13G172900 Gossypium hirsutum HOM05D003677 ORTHO05D004231 3.2e-42 175.6 114 77.2
Lj4g0016038 Lotus japonicus HOM05D003677 ORTHO05D004231 5.5e-42 174.9 175 61.1
THA.LOC104802833 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 1.2e-41 173.7 123 74.0
Migut.I00390 Erythranthe guttata HOM05D003677 ORTHO05D004231 1.6e-41 173.3 161 60.2
Nitab4.5_0002915g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.7e-41 172.6 157 65.6
PSO210G0146 Papaver somniferum HOM05D003677 ORTHO05D004231 4.6e-41 171.8 120 71.7
DCAR_024364 Daucus carota HOM05D003677 ORTHO05D004231 7.9e-41 171.0 102 80.4
Nitab4.5_0010738g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.0e-40 170.6 163 57.7
PSO210G2652 Papaver somniferum HOM05D003677 ORTHO05D004231 1.0e-40 170.6 120 70.8
AL3G14510 Arabidopsis lyrata HOM05D003677 ORTHO05D004231 1.3e-40 170.2 109 75.2
ClCG06G009560 Citrullus lanatus HOM05D003677 ORTHO05D004231 1.3e-40 170.2 163 58.9
Peaxi162Scf00015g00308 Petunia axillaris HOM05D003677 ORTHO05D004231 2.3e-40 169.5 165 58.2
Sp3g03350 Schrenkiella parvula HOM05D003677 ORTHO05D004231 2.3e-40 169.5 168 61.3
THA.LOC104805782 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 2.3e-40 169.5 161 59.0
Zm00001eb185100 Zea mays HOM05D003677 ORTHO05D004231 3.0e-40 169.1 164 56.7
HPP92_002516 Vanilla planifolia HOM05D003677 ORTHO05D004231 5.1e-40 168.3 122 70.5
HPP92_002535 Vanilla planifolia HOM05D003677 ORTHO05D004231 5.1e-40 168.3 122 70.5
QL03p030537 Quercus lobata HOM05D003677 ORTHO05D004231 8.7e-40 167.5 95 81.1
A05p42980 Brassica napus HOM05D003677 ORTHO05D004231 1.1e-39 167.2 134 64.2
Sopen04g005170 Solanum pennellii HOM05D003677 ORTHO05D004231 1.5e-39 166.8 161 55.3
PGSC0003DMG400023407 Solanum tuberosum HOM05D003677 ORTHO05D004231 1.5e-39 166.8 176 55.7
Solyc05g055010.4 Solanum lycopersicum HOM05D003677 ORTHO05D004231 1.9e-39 166.4 164 56.7
Sopen05g033470 Solanum pennellii HOM05D003677 ORTHO05D004231 2.5e-39 166.0 164 56.7
FAN05G1443 Fragaria x ananassa HOM05D003677 ORTHO05D004231 3.3e-39 165.6 182 55.5
Lalb_Chr16g0386451 Lupinus albus HOM05D003677 ORTHO05D004231 4.3e-39 165.2 175 54.3
Hund22161 Selenicereus undatus HOM05D003677 ORTHO05D004231 4.3e-39 165.2 212 49.1
Solyc04g010040.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 5.6e-39 164.9 154 57.1
HanXRQChr04g0108621 Helianthus annuus HOM05D003677 ORTHO05D004231 7.4e-39 164.5 108 75.9
Peaxi162Scf00152g00828 Petunia axillaris HOM05D003677 ORTHO05D004231 7.4e-39 164.5 109 72.5
AUR62040925 Chenopodium quinoa HOM05D003677 ORTHO05D004231 9.6e-39 164.1 93 80.6
SEGI_18661 Sequoiadendron giganteum HOM05D003677 ORTHO05D004231 1.6e-38 163.3 209 49.3
AT3G04500 Arabidopsis thaliana HOM05D003677 ORTHO05D004231 2.8e-38 162.5 159 57.2
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 2.8e-38 162.5 93 80.6
BraA05t23042Z Brassica rapa HOM05D003677 ORTHO05D004231 3.7e-38 162.2 140 60.7
Carub.0003s0366 Capsella rubella HOM05D003677 ORTHO05D004231 6.2e-38 161.4 93 79.6
Pp3c23_14650 Physcomitrium patens HOM05D003677 ORTHO05D004231 8.2e-38 161.0 174 58.0
Zm00001eb108490 Zea mays HOM05D003677 ORTHO05D004231 1.4e-37 160.2 159 56.0
Mapoly0213s0004 Marchantia polymorpha HOM05D003677 ORTHO05D004231 1.8e-37 159.8 184 50.5
AagrBONN_evm.TU.Sc2ySwM_228.2901 Anthoceros agrestis HOM05D003677 ORTHO05D004231 2.4e-37 159.5 169 53.3
Lalb_Chr09g0329801 Lupinus albus HOM05D003677 ORTHO05D004231 3.1e-37 159.1 96 77.1
Thhalv10021407m.g Eutrema salsugineum HOM05D003677 ORTHO05D004231 4.0e-37 158.7 169 60.9
Aa31LG5G14940 Aethionema arabicum HOM05D003677 ORTHO05D004231 6.9e-37 157.9 143 60.8
CARHR078690 Cardamine hirsuta HOM05D003677 ORTHO05D004231 2.0e-36 156.4 127 65.4
Migut.I00391 Erythranthe guttata HOM05D003677 ORTHO05D004231 5.8e-36 154.8 118 71.2
C03p40840 Brassica napus HOM05D003677 ORTHO05D004231 2.2e-35 152.9 89 79.8
BcaC05g30193 Brassica carinata HOM05D003677 ORTHO05D004231 4.9e-35 151.8 162 58.0
Lj2A42G39 Lonicera japonica HOM05D003677 ORTHO05D004231 6.5e-35 151.4 293 39.9
Zm00001eb326740 Zea mays HOM05D003677 ORTHO05D004231 6.5e-35 151.4 157 58.0
Os08g0567200 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 5.5e-34 148.3 163 54.0
arahy.Tifrunner.gnm1.ann1.64W5EF Arachis hypogaea HOM05D003677 ORTHO05D004231 7.1e-34 147.9 166 54.8
SMO367G0071 Selaginella moellendorffii HOM05D003677 ORTHO05D004231 2.7e-33 146.0 93 72.0
Nitab4.5_0003780g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.0e-32 144.1 170 50.0
Peaxi162Scf00528g00119 Petunia axillaris HOM05D003677 ORTHO05D004231 5.1e-32 141.7 156 53.2
BolC3t16355H Brassica oleracea HOM05D003677 ORTHO05D004231 2.5e-31 139.4 79 79.7
CBR_g52330 Chara braunii HOM05D003677 ORTHO05D004231 5.7e-31 138.3 92 67.4
Dinv24683 Davidia involucrata HOM05D003677 ORTHO05D004231 2.2e-30 136.3 139 59.0
Cc11_g04280 Coffea canephora HOM05D003677 ORTHO05D004231 1.2e-28 130.6 137 55.5
Oeu039587.1 Olea europaea HOM05D003677 ORTHO05D004231 5.0e-27 125.2 132 56.1
MSTRG.24142 Avicennia marina HOM05D003677 ORTHO05D004231 1.4e-26 123.6 142 58.5
Oeu002000.1 Olea europaea HOM05D003677 ORTHO05D004231 4.2e-26 122.1 129 59.7
A03p33640 Brassica napus HOM05D003677 ORTHO05D004231 9.3e-26 120.9 81 72.8
BraA03t12539Z Brassica rapa HOM05D003677 ORTHO05D004231 9.3e-26 120.9 81 72.8
BcaC01g03318 Brassica carinata HOM05D003677 ORTHO05D004231 2.1e-25 119.8 71 71.8
CSS0027708 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 6.1e-25 118.2 159 50.3
CSS0028631 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 6.1e-25 118.2 159 50.3
Aqoxy2G03669 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 1.8e-24 116.7 119 55.5
Nitab4.5_0006737g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 4.8e-22 108.6 81 66.7
HanXRQChr13g0397681 Helianthus annuus HOM05D003677 ORTHO05D004231 4.1e-21 105.5 119 58.8
Cc00_g16450 Coffea canephora HOM05D003677 ORTHO05D004231 2.0e-20 103.2 53 86.8
arahy.Tifrunner.gnm1.ann1.UY3EWL Arachis hypogaea HOM05D003677 ORTHO05D004231 1.4e-18 97.1 60 71.7
Os02g0622500 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 1.4e-18 97.1 134 47.8
Nitab4.5_0002478g0040 Nicotiana tabacum HOM05D003677 ORTHO05D004231 7.9e-17 91.3 74 60.8
CAN.G1465.9 Capsicum annuum HOM05D003677 ORTHO05D004231 1.8e-16 90.1 131 41.2
Haze_26142 Corylus avellana HOM05D003677 ORTHO05D004231 2.0e-15 86.7 71 56.3
CSS0031912 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 2.6e-12 76.3 35 97.1
CSS0033866 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 2.6e-12 76.3 35 97.1
MCO06G051 Micromonas commoda HOM05D003677 ORTHO05D004231 5.9e-12 75.1 56 57.1
Cre02.g088800 Chlamydomonas reinhardtii HOM05D003677 ORTHO05D004231 2.9e-11 72.8 52 53.8
C03p53720 Brassica napus HOM05D003677 ORTHO05D004231 2.5e-10 69.7 34 85.3
CARHR219880 Cardamine hirsuta HOM05D003677 ORTHO05D004231 1.6e-09 67.0 54 55.6
Cfa024934 Carpinus fangiana HOM05D006964 ORTHO05D008861 5.7e-07 58.5 157 36.3
Dinv36116 Davidia involucrata HOM05D003677 ORTHO05D004231 7.4e-07 58.2 117 41.0
PRCOL_00001552 Prasinoderma coloniale HOM05D003677 ORTHO05D004231 6.3e-06 55.1 38 57.9


User provided reference genes

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