Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0143751 Lupinus albus HOM05D000515 ORTHO05D001911 3.2e-184 648.3 331 100.0
Lalb_Chr21g0307081 Lupinus albus HOM05D000515 ORTHO05D001911 2.6e-101 372.9 254 80.3
Lalb_Chr06g0164041 Lupinus albus HOM05D000515 ORTHO05D001911 1.3e-95 354.0 254 76.8
Ca_11273_v3 Cicer arietinum L. HOM05D000515 ORTHO05D001911 1.3e-84 317.4 308 58.4
arahy.Tifrunner.gnm1.ann1.FT35RV Arachis hypogaea HOM05D000515 ORTHO05D001911 3.3e-80 302.8 314 55.1
arahy.Tifrunner.gnm1.ann1.GXB7IN Arachis hypogaea HOM05D000515 ORTHO05D001911 8.2e-79 298.1 314 54.5
TPR.G4136 Trifolium pratense HOM05D000515 ORTHO05D001911 1.6e-74 283.9 307 53.7
Glyma.20G100800 Glycine max HOM05D000515 ORTHO05D001911 1.8e-70 270.4 251 61.8
Glyma.10G288200 Glycine max HOM05D000515 ORTHO05D001911 3.5e-69 266.2 255 59.6
Medtr1g115215 Medicago truncatula HOM05D000515 ORTHO05D001911 1.5e-67 260.8 307 52.8
Lj5g0024109 Lotus japonicus HOM05D000515 ORTHO05D001911 2.5e-67 260.0 322 53.1
VMungo0331G0968 Vigna mungo HOM05D000515 ORTHO05D001911 2.4e-62 243.4 259 55.2
Psat6g235320 Pisum sativum HOM05D000515 ORTHO05D001911 4.0e-57 226.1 352 43.5
Phvul.007G012900 Phaseolus vulgaris HOM05D000515 ORTHO05D001911 2.2e-55 220.3 254 53.1
VMungo0720G2951 Vigna mungo HOM05D000515 ORTHO05D001911 5.4e-54 215.7 250 53.2
Haze_17407 Corylus avellana HOM05D000515 ORTHO05D001911 2.9e-47 193.4 328 39.3
Thecc.02G153400 Theobroma cacao HOM05D000515 ORTHO05D001911 5.8e-40 169.1 327 38.5
Duzib052G0949 Durio zibethinus HOM05D000515 ORTHO05D001911 3.5e-37 159.8 321 37.1
COL.COLO4_33128 Corchorus olitorius HOM05D000515 ORTHO05D001911 1.2e-32 144.8 329 36.5
Atru.chr11.1258 Acer truncatum HOM05D000515 ORTHO05D001911 1.9e-30 137.5 209 40.7
Prupe.1G350600 Prunus persica HOM05D000515 ORTHO05D001911 2.4e-30 137.1 319 34.5
Psat6g235240 Pisum sativum HOM05D000515 ORTHO05D001911 9.2e-30 135.2 243 42.4
TWI74G1094 Tripterygium wilfordii HOM05D000515 ORTHO05D001911 3.5e-29 133.3 332 34.9
Manes.04G162000 Manihot esculenta HOM05D000515 ORTHO05D001911 5.1e-28 129.4 254 38.2
QL01p000485 Quercus lobata HOM05D000515 ORTHO05D001911 5.1e-28 129.4 258 39.9
QL01p000579 Quercus lobata HOM05D000515 ORTHO05D001911 5.1e-28 129.4 258 39.9
Gorai.012G136000 Gossypium raimondii HOM05D000515 ORTHO05D001911 1.9e-27 127.5 261 40.6
Gohir.A04G109472 Gossypium hirsutum HOM05D000515 ORTHO05D001911 5.6e-27 125.9 254 40.6
Gohir.D04G149500 Gossypium hirsutum HOM05D000515 ORTHO05D001911 5.6e-27 125.9 254 40.9
vmacro16006 Vaccinium macrocarpon HOM05D000515 ORTHO05D001911 4.7e-26 122.9 330 33.6
Potri.007G000700 Populus trichocarpa HOM05D000515 ORTHO05D001911 2.3e-25 120.6 268 36.2
CiPaw.16G001400 Carya illinoinensis HOM05D000515 ORTHO05D001911 5.8e-24 115.9 264 35.6
CiPaw.15G001200 Carya illinoinensis HOM05D000515 ORTHO05D001911 6.4e-23 112.5 330 32.7
Ciclev10030591m.g Citrus clementina HOM05D000515 ORTHO05D001911 1.1e-22 111.7 284 34.5
MD13G1002000 Malus domestica HOM05D000515 ORTHO05D001911 1.4e-22 111.3 323 33.4
Gorai.005G213400 Gossypium raimondii HOM05D000515 ORTHO05D001911 4.1e-22 109.8 262 35.9
Gohir.D02G190700 Gossypium hirsutum HOM05D000515 ORTHO05D001911 7.1e-22 109.0 262 35.9
Dinv17734 Davidia involucrata HOM05D000515 ORTHO05D001911 3.5e-21 106.7 228 34.6
Gohir.A03G167600 Gossypium hirsutum HOM05D000515 ORTHO05D001911 4.6e-21 106.3 262 35.1
RcHm_v2.0_Chr4g0447091 Rosa chinensis HOM05D000515 ORTHO05D001911 4.6e-21 106.3 321 33.3
Hma1.2p1_0413F.1_g147360 Hydrangea macrophylla HOM05D000515 ORTHO05D001911 7.8e-21 105.5 337 30.9
Dinv18827 Davidia involucrata HOM05D000515 ORTHO05D001911 6.6e-20 102.4 142 41.5
GSVIVG01034370001 Vitis vinifera HOM05D000515 ORTHO05D001911 4.3e-19 99.8 270 31.9
ClCG01G008000 Citrullus lanatus HOM05D000515 ORTHO05D001911 1.2e-18 98.2 257 35.0
CsaV3_5G021860 Cucumis sativus L. HOM05D000515 ORTHO05D001911 3.6e-18 96.7 256 34.4
FAN17G2470 Fragaria x ananassa HOM05D000515 ORTHO05D001911 8.1e-18 95.5 321 31.8
Eucgr.J00340 Eucalyptus grandis HOM05D000515 ORTHO05D001911 1.4e-17 94.7 326 31.3
CANSAT78G1760 Cannabis sativa HOM05D000515 ORTHO05D001911 1.8e-17 94.4 266 33.8
Lj6A706T55 Lonicera japonica HOM05D000515 ORTHO05D019457 5.8e-16 89.4 339 30.4
TAR629G3384 Trochodendron aralioides HOM05D000515 ORTHO05D001911 9.9e-16 88.6 333 27.0
MELO3C005080.2 Cucumis melo HOM05D000515 ORTHO05D001911 1.3e-15 88.2 256 32.8
Nn4g25173 Nelumbo nucifera HOM05D000515 ORTHO05D001911 2.2e-15 87.4 326 29.1
FAN07G0234 Fragaria x ananassa HOM05D000515 ORTHO05D001911 3.8e-15 86.7 313 30.4
RhsimUnG0102500 Rhododendron simsii HOM05D000515 ORTHO05D001911 3.8e-15 86.7 285 31.2
Migut.J00013 Erythranthe guttata HOM05D000515 ORTHO05D001911 4.9e-15 86.3 330 27.3
Sed0025729 Sechium edule HOM05D000515 ORTHO05D001911 1.2e-13 81.6 264 29.9
Lj3C845T16 Lonicera japonica HOM05D000515 ORTHO05D001911 1.0e-12 78.6 134 35.8
Peaxi162Scf00900g00113 Petunia axillaris HOM05D000515 ORTHO05D001911 8.7e-12 75.5 276 31.5
Aqoxy3G04320 Aquilegia oxysepala HOM05D000515 ORTHO05D001911 2.8e-10 70.5 244 28.7
Aqoxy4G00480 Aquilegia oxysepala HOM05D000515 ORTHO05D001911 3.6e-10 70.1 344 24.7
Sp3g18040 Schrenkiella parvula HOM05D000515 ORTHO05D001911 1.1e-09 68.6 252 30.2
Actinidia04091 Actinidia chinensis HOM05D035463 ORTHO05D019457 1.8e-09 67.8 265 28.3
Solyc02g050280.4 Solanum lycopersicum HOM05D000515 ORTHO05D001911 4.0e-09 66.6 309 29.4
CAN.G187.4 Capsicum annuum HOM05D000515 ORTHO05D001911 9.0e-09 65.5 309 29.4
MSTRG.18929 Avicennia marina HOM05D000515 ORTHO05D001911 2.6e-08 63.9 267 27.0
Nitab4.5_0000139g0020 Nicotiana tabacum HOM05D000515 ORTHO05D001911 7.6e-08 62.4 308 27.3
Sopen02g008610 Solanum pennellii HOM05D000515 ORTHO05D001911 2.2e-07 60.8 245 31.0
MD00G1127300 Malus domestica HOM05D000515 ORTHO05D001911 4.9e-07 59.7 253 30.0
AL1G58050 Arabidopsis lyrata HOM05D000515 ORTHO05D001911 3.2e-06 57.0 251 30.3


User provided reference genes

Program Settings