Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.2e-186 656.4 343 100.0
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 9.2e-142 507.3 343 79.3
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 3.5e-141 505.4 326 80.7
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 5.1e-140 501.5 325 81.5
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 6.6e-140 501.1 325 80.0
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 8.7e-140 500.7 331 80.7
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 6.2e-138 494.6 324 80.9
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.1e-137 493.8 324 79.3
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.7e-135 486.5 342 76.0
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.1e-134 483.8 343 75.5
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 4.2e-134 481.9 349 74.2
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 2.3e-132 476.1 333 74.8
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 3.0e-132 475.7 321 77.3
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 6.2e-130 468.0 320 76.9
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 4.5e-128 461.8 342 72.8
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 5.8e-128 461.5 339 72.3
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.1e-126 454.5 341 70.7
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.6e-125 453.4 323 75.5
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 3.5e-125 452.2 341 70.4
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.0e-124 450.7 330 70.9
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.3e-124 450.3 341 69.8
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.8e-124 449.9 339 71.7
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 2.3e-124 449.5 321 72.6
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.0e-124 449.1 327 72.2
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.0e-124 449.1 341 70.1
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.0e-124 449.1 341 69.5
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.9e-123 446.4 333 69.4
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.3e-123 445.7 341 69.2
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 9.6e-123 444.1 337 69.1
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.3e-122 443.7 346 67.9
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 3.7e-122 442.2 318 71.1
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.1e-121 440.7 340 69.4
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 1.8e-121 439.9 327 69.4
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.4e-121 439.5 318 70.4
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 4.0e-121 438.7 341 68.3
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 1.2e-120 437.2 318 69.8
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 2.6e-120 436.0 339 65.2
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 9.9e-120 434.1 321 67.3
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 3.8e-119 432.2 343 68.8
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.4e-118 430.3 339 69.0
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 3.2e-118 429.1 328 68.6
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.2e-117 427.2 318 68.9
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 2.1e-117 426.4 320 67.8
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 4.6e-117 425.2 321 65.4
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 4.6e-117 425.2 321 65.4
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.3e-116 423.7 320 67.8
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.8e-116 423.3 333 68.8
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 3.9e-116 422.2 320 67.8
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 3.9e-116 422.2 327 66.1
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-115 420.6 320 67.5
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.1e-115 420.6 315 68.6
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.5e-115 420.2 320 67.2
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.9e-115 419.9 320 66.9
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 3.3e-115 419.1 320 67.2
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 9.6e-115 417.5 318 67.0
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 2.1e-114 416.4 321 63.6
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.8e-113 413.3 321 62.9
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.5e-112 410.2 343 63.8
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 1.5e-112 410.2 325 67.4
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 4.5e-112 408.7 324 66.4
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 4.5e-112 408.7 303 68.6
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 1.3e-111 407.1 323 65.9
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.4e-110 403.7 341 63.6
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 3.2e-110 402.5 330 65.2
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 1.2e-109 400.6 344 62.8
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.7e-109 399.4 303 67.7
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 3.5e-109 399.1 329 62.6
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 6.0e-109 398.3 320 63.1
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 6.0e-109 398.3 320 63.1
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 6.0e-109 398.3 322 65.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.0e-108 397.5 320 64.7
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.3e-108 396.4 341 62.5
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 5.1e-108 395.2 341 61.0
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.1e-107 394.0 341 61.3
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 9.7e-107 391.0 319 62.1
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 9.0e-105 384.4 286 67.1
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 6.5e-103 378.3 270 67.8
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 7.2e-102 374.8 336 58.3
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 1.8e-100 370.2 333 58.9
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 1.8e-100 370.2 332 58.7
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 3.9e-100 369.0 332 57.8
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.1e-99 367.5 319 60.8
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 7.4e-99 364.8 320 59.4
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 4.1e-97 359.0 266 69.9
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 1.0e-95 354.4 326 58.0
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 5.0e-95 352.1 323 59.8
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.1e-91 340.9 237 71.3
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.5e-91 340.5 344 60.5
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 2.2e-87 326.6 326 54.9
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 4.7e-85 318.9 288 58.0
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 1.1e-83 314.3 320 56.6
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 4.5e-80 302.4 342 49.7
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.0e-79 301.2 345 50.4
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 6.1e-77 292.0 328 50.9
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 2.0e-75 287.0 317 48.9
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.5e-67 260.8 318 46.9
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 7.5e-67 258.5 325 47.4
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 3.7e-66 256.1 186 70.4
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 5.4e-65 252.3 199 62.8
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 5.9e-64 248.8 187 66.8
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 5.9e-64 248.8 225 59.6
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 7.5e-59 231.9 161 73.9
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 2.7e-56 223.4 205 57.6
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 4.3e-46 189.5 253 44.7
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.8e-36 157.5 108 71.3
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.3e-36 157.1 108 71.3
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.7e-32 143.7 90 80.0
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 6.4e-26 122.5 269 31.6
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 5.1e-23 112.8 122 49.2
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 7.3e-22 109.0 115 53.9
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.9e-14 84.3 66 69.7
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.6e-08 64.7 49 71.4


User provided reference genes

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