Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c21g0405111 Lupinus albus HOM05D002864 ORTHO05D008485 5.5e-147 524.2 260 100.0
Lalb_Chr00c21g0405391 Lupinus albus HOM05D002864 ORTHO05D008485 1.5e-128 463.0 236 98.3
Lalb_Chr00c24g0407171 Lupinus albus HOM05D002864 ORTHO05D008485 1.5e-128 463.0 236 98.3
Lalb_Chr00c21g0405251 Lupinus albus HOM05D002864 ORTHO05D008485 2.6e-120 435.6 223 98.2
Lalb_Chr11g0070141 Lupinus albus HOM05D002864 ORTHO05D008485 1.1e-118 430.3 223 97.3
Lalb_Chr11g0070221 Lupinus albus HOM05D002864 ORTHO05D008485 1.1e-118 430.3 223 97.3
Lalb_Chr07g0190471 Lupinus albus HOM05D002864 ORTHO05D008485 6.2e-106 387.9 223 89.2
Lalb_Chr00c21g0405201 Lupinus albus HOM05D002864 ORTHO05D008485 4.2e-102 375.2 192 97.9
Psat0ss7220g0040 Pisum sativum HOM05D002864 ORTHO05D008485 1.4e-94 350.1 184 95.1
LjContig00315g0018050 Lotus japonicus HOM05D002864 ORTHO05D008485 1.9e-94 349.7 184 95.1
LjContig00439g0002067 Lotus japonicus HOM05D002864 ORTHO05D008485 1.9e-94 349.7 184 95.1
LjContig00446g0004288 Lotus japonicus HOM05D002864 ORTHO05D008485 1.9e-94 349.7 184 95.1
CANSAT16G0032 Cannabis sativa HOM05D002864 ORTHO05D008485 3.2e-94 349.0 184 95.1
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 1.2e-93 347.1 199 87.9
CARHR288210 Cardamine hirsuta HOM05D002864 ORTHO05D008485 1.3e-92 343.6 184 92.9
A04p09410 Brassica napus HOM05D002864 ORTHO05D008485 1.8e-92 343.2 184 93.5
BolSC28t60372H Brassica oleracea HOM05D002864 ORTHO05D008485 1.8e-92 343.2 184 93.5
BraSC159t45731Z Brassica rapa HOM05D002864 ORTHO05D008485 1.8e-92 343.2 184 93.5
AT2G07725 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 2.3e-92 342.8 184 92.9
ATMG00210 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 2.3e-92 342.8 184 92.9
CARHR282720 Cardamine hirsuta HOM05D002864 ORTHO05D008485 2.3e-92 342.8 184 92.9
Sed0011141 Sechium edule HOM05D002864 ORTHO05D008485 5.1e-92 341.7 184 93.5
Sed0025017 Sechium edule HOM05D002864 ORTHO05D008485 5.1e-92 341.7 184 93.5
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 8.7e-92 340.9 191 90.1
BraSC54t46369Z Brassica rapa HOM05D002864 ORTHO05D008485 7.4e-91 337.8 184 92.4
BolSC28t60317H Brassica oleracea HOM05D002864 ORTHO05D008485 2.1e-90 336.3 185 91.4
BraSC48t46332Z Brassica rapa HOM05D002864 ORTHO05D008485 4.8e-90 335.1 180 93.3
BraSC48t46241Z Brassica rapa HOM05D002864 ORTHO05D008485 1.4e-89 333.6 184 90.8
Nn1g09937 Nelumbo nucifera HOM05D002864 ORTHO05D008485 1.8e-89 333.2 185 91.9
Nn1g10176 Nelumbo nucifera HOM05D002864 ORTHO05D008485 1.8e-89 333.2 185 91.9
arahy.Tifrunner.gnm1.ann1.ID22MY Arachis hypogaea HOM05D002864 ORTHO05D008485 6.9e-89 331.3 185 90.3
SHI26647 Sapria himalayana HOM05D002864 ORTHO05D008485 9.0e-89 330.9 187 87.7
TAR371G0939 Trochodendron aralioides HOM05D002864 ORTHO05D008485 2.6e-88 329.3 187 89.8
Lj2A1230T121 Lonicera japonica HOM05D002864 ORTHO05D008485 2.9e-87 325.9 193 87.6
CSS0047546 Camellia sinensis var. sinensis HOM05D002864 ORTHO05D008485 3.2e-86 322.4 186 90.3
SalBow1G5070 Salvia bowleyana HOM05D002864 ORTHO05D008485 8.7e-84 314.3 202 82.2
AUR62042335 Chenopodium quinoa HOM05D002864 ORTHO05D008485 1.5e-83 313.5 184 87.5
PGR028G0017 Punica granatum HOM05D002864 ORTHO05D008485 3.7e-82 308.9 186 87.1
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 6.2e-82 308.1 185 86.5
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 6.2e-82 308.1 185 86.5
Lsat_1_v5_gn_4_66001 Lactuca sativa HOM05D002864 ORTHO05D008485 1.4e-81 307.0 187 85.6
Lsat_1_v5_gn_7_96661 Lactuca sativa HOM05D002864 ORTHO05D008485 1.4e-81 307.0 187 85.6
CAN.G366.9 Capsicum annuum HOM05D002864 ORTHO05D008485 4.0e-81 305.4 186 87.6
CAN.G537.1 Capsicum annuum HOM05D002864 ORTHO05D008485 4.0e-81 305.4 186 87.6
CAN.G539.3 Capsicum annuum HOM05D002864 ORTHO05D008485 4.0e-81 305.4 186 87.6
CAN.G761.1 Capsicum annuum HOM05D002864 ORTHO05D008485 4.0e-81 305.4 186 87.6
HanXRQChr04g0101201 Helianthus annuus HOM05D002864 ORTHO05D008485 1.2e-80 303.9 187 84.5
HanXRQMTg0579191 Helianthus annuus HOM05D002864 ORTHO05D008485 1.2e-80 303.9 187 84.5
Aqoxy12s038 Aquilegia oxysepala HOM05D002864 ORTHO05D008485 4.5e-80 302.0 200 79.5
arahy.Tifrunner.gnm1.ann1.I2EFRY Arachis hypogaea HOM05D002864 ORTHO05D008485 4.5e-80 302.0 174 87.9
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 2.5e-78 296.2 241 71.8
SGA_v2.0_scaffold420G51305 Striga asiatica HOM05D002864 ORTHO05D008485 1.2e-77 293.9 203 79.8
unitig_87.g28031 Utricularia gibba HOM05D002864 ORTHO05D008485 6.7e-76 288.1 198 79.8
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 1.4e-73 280.4 162 88.3
Lj2P1221T99 Lonicera japonica HOM05D002864 ORTHO05D008485 5.3e-73 278.5 156 91.7
DCAR_032433 Daucus carota HOM05D002864 ORTHO05D008485 2.0e-72 276.6 183 80.3
Gohir.A06G146200 Gossypium hirsutum HOM05D002864 ORTHO05D008485 7.6e-72 274.6 154 90.3
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.8e-71 272.3 177 84.2
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 1.9e-70 270.0 173 83.8
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.5e-70 269.6 176 83.0
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 5.5e-70 268.5 159 84.9
HanXRQChr01g0001471 Helianthus annuus HOM05D002864 ORTHO05D008485 1.2e-69 267.3 186 76.9
Rhsim07G0136600 Rhododendron simsii HOM05D002864 ORTHO05D008485 2.7e-69 266.2 186 78.5
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 1.5e-67 260.4 163 86.5
SHI40661 Sapria himalayana HOM05D002864 ORTHO05D008485 9.4e-62 241.1 169 79.9
Ah.09g227250 Amaranthus hybridus HOM05D002864 ORTHO05D008485 3.6e-61 239.2 147 83.7
Nitab4.5_0004300g0150 Nicotiana tabacum HOM05D002864 ORTHO05D008485 3.6e-61 239.2 186 73.1
arahy.Tifrunner.gnm1.ann1.3LP0N0 Arachis hypogaea HOM05D002864 ORTHO05D008485 3.2e-54 216.1 125 84.8
HanXRQChr13g0389461 Helianthus annuus HOM05D002864 ORTHO05D008485 1.2e-53 214.2 150 76.0
Lsat_1_v5_gn_7_25860 Lactuca sativa HOM05D002864 ORTHO05D008485 3.0e-52 209.5 129 85.3
Zm00001eb299530 Zea mays HOM05D002864 ORTHO05D008485 2.0e-51 206.8 187 58.8
Lsat_1_v5_gn_5_71841 Lactuca sativa HOM05D002864 ORTHO05D008485 2.6e-51 206.5 133 83.5
ATR0709G086 Amborella trichopoda HOM05D002864 ORTHO05D008485 1.7e-50 203.8 132 77.3
Gohir.D12G077000 Gossypium hirsutum HOM05D002864 ORTHO05D008485 1.9e-46 190.3 172 65.1
RcHm_v2.0_Chr5g0061711 Rosa chinensis HOM05D002864 ORTHO05D008485 1.9e-46 190.3 187 58.8
HanXRQChr13g0393901 Helianthus annuus HOM05D002864 ORTHO05D008485 2.5e-46 189.9 115 85.2
FvH4_3g34030 Fragaria vesca HOM05D002864 ORTHO05D008485 6.7e-44 181.8 188 57.4
FAN11G1817 Fragaria x ananassa HOM05D002864 ORTHO05D008485 6.7e-44 181.8 188 57.4
SEGI_29573 Sequoiadendron giganteum HOM05D002864 ORTHO05D008485 6.7e-44 181.8 177 59.9
FAN16G0826 Fragaria x ananassa HOM05D002864 ORTHO05D008485 2.0e-43 180.3 188 56.9
FAN21G0602 Fragaria x ananassa HOM05D002864 ORTHO05D008485 2.0e-43 180.3 188 56.9
ClCG06G009270 Citrullus lanatus HOM05D002864 ORTHO05D008485 4.5e-40 169.1 95 84.2
MELO3C035260.2 Cucumis melo HOM05D002864 ORTHO05D008485 1.5e-38 164.1 109 78.9
MELO3C000759.2 Cucumis melo HOM05D002864 ORTHO05D008485 7.2e-38 161.8 109 78.0
Nitab4.5_0000120g0100 Nicotiana tabacum HOM05D002864 ORTHO05D008485 1.3e-34 151.0 228 46.1
Solyc09g050040.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 4.5e-32 142.5 107 75.7
arahy.Tifrunner.gnm1.ann1.IM9F8N Arachis hypogaea HOM05D002864 ORTHO05D008485 2.3e-31 140.2 84 86.9
MELO3C035317.2 Cucumis melo HOM05D002864 ORTHO05D008485 5.0e-31 139.0 108 70.4
HanXRQChr13g0389471 Helianthus annuus HOM05D002864 ORTHO05D008485 5.0e-31 139.0 86 81.4
Actinidia34819 Actinidia chinensis HOM05D002864 ORTHO05D008485 1.9e-30 137.1 75 90.7
CAN.G826.1 Capsicum annuum HOM05D002864 ORTHO05D008485 3.3e-30 136.3 83 84.3
MELO3C005021.2 Cucumis melo HOM05D002864 ORTHO05D008485 3.3e-30 136.3 108 69.4
CAN.G1439.10 Capsicum annuum HOM05D002864 ORTHO05D008485 1.4e-28 131.0 77 85.7
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 1.8e-28 130.6 87 78.2
Ca_08792_v3 Cicer arietinum L. HOM05D000255 ORTHO05D028863 1.2e-27 127.9 69 92.8
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 1.2e-27 127.9 69 92.8
PGSC0003DMG400033612 Solanum tuberosum HOM05D002864 ORTHO05D008485 9.8e-27 124.8 72 88.9
CAN.G1542.4 Capsicum annuum HOM05D002864 ORTHO05D008485 3.7e-26 122.9 106 66.0
arahy.Tifrunner.gnm1.ann1.G1F49J Arachis hypogaea HOM05D002864 ORTHO05D008485 6.3e-26 122.1 107 61.7
CAN.G1001.40 Capsicum annuum HOM05D002864 ORTHO05D008485 1.1e-25 121.3 72 83.3
Nitab4.5_0000684g0100 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.2e-24 117.9 69 81.2
ATR0104G021 Amborella trichopoda HOM05D002864 ORTHO05D008485 9.5e-22 108.2 81 70.4
AagrBONN_evm.TU.Sc2ySwM_117.2676 Anthoceros agrestis HOM05D002864 ORTHO05D008485 6.1e-21 105.5 173 38.2
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 8.0e-21 105.1 77 70.1
ATR0091G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 5.2e-20 102.4 72 73.6
ATR0573G003 Amborella trichopoda HOM05D002864 ORTHO05D008485 1.3e-18 97.8 67 74.6
ATR0015G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 1.7e-18 97.4 67 71.6
CAN.G502.17 Capsicum annuum HOM05D002864 ORTHO05D008485 1.8e-17 94.0 81 65.4
ATR0004G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 7.0e-17 92.0 67 65.7
ATR1100G026 Amborella trichopoda HOM05D002864 ORTHO05D008485 4.6e-16 89.4 54 83.3
ClCG02G008120 Citrullus lanatus HOM05D002864 ORTHO05D008485 1.1e-14 84.7 53 79.2
Nitab4.5_0024895g0040 Nicotiana tabacum HOM05D002864 ORTHO05D008485 9.5e-14 81.6 53 81.1
Mapoly0023s0175 Marchantia polymorpha HOM05D002864 ORTHO05D008485 8.0e-13 78.6 62 66.1
Medtr2g096500 Medicago truncatula HOM05D006496 ORTHO05D008485 4.0e-12 76.3 41 90.2
MELO3C013035.2 Cucumis melo HOM05D002864 ORTHO05D008485 5.2e-12 75.9 68 58.8
ATR0959G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 1.5e-11 74.3 50 76.0
ATR0135G003 Amborella trichopoda HOM05D002864 ORTHO05D008485 2.9e-10 70.1 53 69.8
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 4.9e-10 69.3 42 81.0
Solyc11g043190.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 4.9e-10 69.3 49 71.4
CAN.G1439.9 Capsicum annuum HOM05D002864 ORTHO05D008485 5.4e-09 65.9 39 76.9
Psat1g132440 Pisum sativum HOM05D002864 ORTHO05D007972 2.1e-08 63.9 56 64.3
MELO3C031088.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.3e-07 60.5 39 66.7
Nitab4.5_0000317g0150 Nicotiana tabacum HOM05D002578 ORTHO05D002698 3.9e-07 59.7 39 74.4
Solyc01g049950.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 1.9e-06 57.4 59 61.0
MELO3C030561.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.5e-06 57.0 40 72.5
Pp3c2_23470 Physcomitrium patens HOM05D002864 ORTHO05D008485 7.3e-06 55.5 55 60.0


User provided reference genes

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