Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund31411 Selenicereus undatus HOM05D001476 ORTHO05D006149 1.0e-54 216.5 106 100.0
Manes.09G101900 Manihot esculenta HOM05D001476 ORTHO05D006149 3.5e-47 191.4 104 87.5
TWI74G1595 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 1.0e-46 189.9 104 85.6
COL.COLO4_14599 Corchorus olitorius HOM05D001476 ORTHO05D006149 1.3e-46 189.5 104 85.6
Duzib106G0695 Durio zibethinus HOM05D001476 ORTHO05D006149 2.2e-46 188.7 104 85.6
Eucgr.B02781 Eucalyptus grandis HOM05D001476 ORTHO05D006149 2.2e-46 188.7 104 86.5
Sc24g0002110 Simmondsia chinensis HOM05D001476 ORTHO05D006149 2.2e-46 188.7 104 86.5
TWI77G0827 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 2.2e-46 188.7 104 85.6
Ah.11g045320 Amaranthus hybridus HOM05D001476 ORTHO05D006149 5.0e-46 187.6 106 83.0
Potri.016G110800 Populus trichocarpa HOM05D001476 ORTHO05D006149 6.5e-46 187.2 104 85.6
Sabra16G0107400 Salix brachista HOM05D001476 ORTHO05D006149 6.5e-46 187.2 104 85.6
Ciclev10011050m.g Citrus clementina HOM05D001476 ORTHO05D006149 8.5e-46 186.8 104 86.5
SGA_v2.0_scaffold22G09908 Striga asiatica HOM05D001476 ORTHO05D006149 1.1e-45 186.4 104 82.7
Actinidia13780 Actinidia chinensis HOM05D001476 ORTHO05D006149 1.5e-45 186.0 104 84.6
EL10Ac5g11563 Beta vulgaris HOM05D001476 ORTHO05D006149 1.5e-45 186.0 106 83.0
Migut.J00228 Erythranthe guttata HOM05D001476 ORTHO05D006149 1.5e-45 186.0 104 85.6
Lalb_Chr07g0193321 Lupinus albus HOM05D001476 ORTHO05D006149 1.5e-45 186.0 102 86.3
Sp3g07550 Schrenkiella parvula HOM05D001476 ORTHO05D006149 1.5e-45 186.0 104 84.6
CiPaw.09G205700 Carya illinoinensis HOM05D001476 ORTHO05D006149 1.9e-45 185.7 104 83.7
Duzib128G0639 Durio zibethinus HOM05D001476 ORTHO05D006149 1.9e-45 185.7 104 83.7
Lj3A957T35 Lonicera japonica HOM05D001476 ORTHO05D006149 1.9e-45 185.7 104 84.6
Lj3g0014893 Lotus japonicus HOM05D001476 ORTHO05D006149 1.9e-45 185.7 102 84.3
BcaC09g48054 Brassica carinata HOM05D001476 ORTHO05D006149 2.5e-45 185.3 104 84.6
BolC1t05473H Brassica oleracea HOM05D001476 ORTHO05D006149 2.5e-45 185.3 104 84.6
CSS0024803 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D006149 2.5e-45 185.3 104 84.6
Cfa017258 Carpinus fangiana HOM05D001476 ORTHO05D002681 2.5e-45 185.3 104 84.6
Haze_20947 Corylus avellana HOM05D001476 ORTHO05D006149 3.2e-45 184.9 104 84.6
Gohir.A09G163100 Gossypium hirsutum HOM05D001476 ORTHO05D006149 3.2e-45 184.9 104 83.7
Gohir.D09G158600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 3.2e-45 184.9 104 83.7
Gorai.006G180300 Gossypium raimondii HOM05D001476 ORTHO05D006149 3.2e-45 184.9 104 83.7
Medtr4g014960 Medicago truncatula HOM05D001476 ORTHO05D006149 3.2e-45 184.9 102 85.3
vmacro20235 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 3.2e-45 184.9 104 83.7
DCAR_024038 Daucus carota HOM05D001476 ORTHO05D006149 4.2e-45 184.5 104 83.7
Dinv35515 Davidia involucrata HOM05D001476 ORTHO05D006149 4.2e-45 184.5 104 84.6
THA.LOC104816221 Tarenaya hassleriana HOM05D001476 ORTHO05D006149 4.2e-45 184.5 102 83.3
Nn2g13602 Nelumbo nucifera HOM05D001476 ORTHO05D006149 5.5e-45 184.1 104 83.7
SalBow5G4659 Salvia bowleyana HOM05D001476 ORTHO05D006149 5.5e-45 184.1 104 82.7
SGA_v2.0_scaffold85G26765 Striga asiatica HOM05D001476 ORTHO05D006149 5.5e-45 184.1 104 84.6
Atru.chr8.2151 Acer truncatum HOM05D001476 ORTHO05D006149 7.2e-45 183.7 104 83.7
Thhalv10020022m.g Eutrema salsugineum HOM05D001476 ORTHO05D006149 7.2e-45 183.7 104 83.7
CARHR083470 Cardamine hirsuta HOM05D001476 ORTHO05D006149 9.5e-45 183.3 102 84.3
Aa31LG3G1620 Aethionema arabicum HOM05D001476 ORTHO05D006149 1.2e-44 183.0 104 83.7
AL3G20170 Arabidopsis lyrata HOM05D001476 ORTHO05D006149 1.2e-44 183.0 104 83.7
BcaC09g48009 Brassica carinata HOM05D001476 ORTHO05D006149 1.2e-44 183.0 104 83.7
BraA01t04314Z Brassica rapa HOM05D001476 ORTHO05D006149 1.2e-44 183.0 104 83.7
Cpa.g.sc56.111 Carica papaya HOM05D001476 ORTHO05D006149 1.2e-44 183.0 104 82.7
Psat0s2261g0240 Pisum sativum HOM05D001476 ORTHO05D006149 1.2e-44 183.0 102 84.3
Thecc.05G022500 Theobroma cacao HOM05D001476 ORTHO05D006149 1.2e-44 183.0 104 82.7
AT3G09090 Arabidopsis thaliana HOM05D001476 ORTHO05D006149 1.6e-44 182.6 104 83.7
BcaC05g29640 Brassica carinata HOM05D001476 ORTHO05D006149 1.6e-44 182.6 104 83.7
Hma1.2p1_0763F.1_g214610 Hydrangea macrophylla HOM05D001476 ORTHO05D006149 1.6e-44 182.6 104 83.7
AUR62043103 Chenopodium quinoa HOM05D001476 ORTHO05D006149 2.1e-44 182.2 104 83.7
AUR62044509 Chenopodium quinoa HOM05D001476 ORTHO05D006149 2.1e-44 182.2 104 83.7
PGR031G2805 Punica granatum HOM05D001476 ORTHO05D006149 2.1e-44 182.2 104 82.7
ClCG04G007260 Citrullus lanatus HOM05D001476 ORTHO05D006149 2.8e-44 181.8 104 82.7
FvH4_6g12060 Fragaria vesca HOM05D001476 ORTHO05D006149 2.8e-44 181.8 102 83.3
FAN14G1008 Fragaria x ananassa HOM05D001476 ORTHO05D006149 2.8e-44 181.8 102 83.3
Peaxi162Scf00009g02022 Petunia axillaris HOM05D001476 ORTHO05D006149 2.8e-44 181.8 104 82.7
Potri.006G096100 Populus trichocarpa HOM05D001476 ORTHO05D006149 2.8e-44 181.8 104 84.6
Rhsim05G0205700 Rhododendron simsii HOM05D001476 ORTHO05D006149 3.6e-44 181.4 104 82.7
A05p39780 Brassica napus HOM05D001476 ORTHO05D006149 4.7e-44 181.0 102 83.3
C05p58820 Brassica napus HOM05D001476 ORTHO05D006149 4.7e-44 181.0 102 83.3
BraA05t22762Z Brassica rapa HOM05D001476 ORTHO05D006149 4.7e-44 181.0 102 83.3
Ca_23816_v3 Cicer arietinum L. HOM05D001476 ORTHO05D006149 4.7e-44 181.0 102 83.3
Sed0003764 Sechium edule HOM05D001476 ORTHO05D006149 4.7e-44 181.0 104 81.7
Carub.0003s0826 Capsella rubella HOM05D001476 ORTHO05D006149 6.1e-44 180.6 104 81.7
AUR62043525 Chenopodium quinoa HOM05D001476 ORTHO05D006149 6.1e-44 180.6 104 82.7
MELO3C003223.2 Cucumis melo HOM05D001476 ORTHO05D006149 6.1e-44 180.6 104 81.7
FAN05G2912 Fragaria x ananassa HOM05D001476 ORTHO05D006149 6.1e-44 180.6 102 82.4
RcHm_v2.0_Chr3g0463901 Rosa chinensis HOM05D001476 ORTHO05D006149 6.1e-44 180.6 102 82.4
CsaV3_4G025980 Cucumis sativus L. HOM05D001476 ORTHO05D006149 8.0e-44 180.3 104 81.7
HanXRQChr16g0507821 Helianthus annuus HOM05D001476 ORTHO05D006149 8.0e-44 180.3 104 80.8
Oeu004614.2 Olea europaea HOM05D001476 ORTHO05D006149 8.0e-44 180.3 104 82.7
FAN14G2619 Fragaria x ananassa HOM05D001476 ORTHO05D006149 1.0e-43 179.9 102 82.4
Nitab4.5_0000652g0160 Nicotiana tabacum HOM05D001476 ORTHO05D006149 1.0e-43 179.9 104 81.7
Oeu044363.1 Olea europaea HOM05D001476 ORTHO05D006149 1.0e-43 179.9 104 80.8
Prupe.6G270500 Prunus persica HOM05D001476 ORTHO05D006149 1.0e-43 179.9 102 82.4
FAN09G2729 Fragaria x ananassa HOM05D001476 ORTHO05D006149 1.4e-43 179.5 102 82.4
Sed0007041 Sechium edule HOM05D001476 ORTHO05D006149 1.4e-43 179.5 104 81.7
CANSAT35G0098 Cannabis sativa HOM05D001476 ORTHO05D006149 1.8e-43 179.1 104 81.7
Gohir.D04G128600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 1.8e-43 179.1 104 80.8
Sabra06G0073800 Salix brachista HOM05D001476 ORTHO05D002681 1.8e-43 179.1 104 81.7
PGSC0003DMG400011017 Solanum tuberosum HOM05D001476 ORTHO05D006149 1.8e-43 179.1 104 80.8
FAN02G1993 Fragaria x ananassa HOM05D001476 ORTHO05D006149 3.0e-43 178.3 102 81.4
Gorai.012G111700 Gossypium raimondii HOM05D001476 ORTHO05D006149 3.0e-43 178.3 104 80.8
GSVIVG01034014001 Vitis vinifera HOM05D001476 ORTHO05D006149 3.0e-43 178.3 104 82.7
CAN.G355.19 Capsicum annuum HOM05D001476 ORTHO05D006149 4.0e-43 177.9 104 80.8
Cc06_g01690 Coffea canephora HOM05D001476 ORTHO05D006149 4.0e-43 177.9 104 79.8
TAR636G2437 Trochodendron aralioides HOM05D001476 ORTHO05D006149 4.0e-43 177.9 104 81.7
arahy.Tifrunner.gnm1.ann1.VBIR99 Arachis hypogaea HOM05D001476 ORTHO05D006149 5.2e-43 177.6 102 81.4
Gohir.A04G088225 Gossypium hirsutum HOM05D001476 ORTHO05D006149 5.2e-43 177.6 104 80.8
Solyc10g085060.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 5.2e-43 177.6 104 80.8
Sopen10g034520 Solanum pennellii HOM05D001476 ORTHO05D006149 5.2e-43 177.6 104 80.8
TPR.G5272 Trifolium pratense HOM05D001476 ORTHO05D006149 6.8e-43 177.2 102 81.4
Lsat_1_v5_gn_0_44361 Lactuca sativa HOM05D001476 ORTHO05D006149 8.8e-43 176.8 104 78.8
Lsat_1_v5_gn_8_99901 Lactuca sativa HOM05D001476 ORTHO05D006149 8.8e-43 176.8 104 78.8
TPR.G6686 Trifolium pratense HOM05D001476 ORTHO05D006149 8.8e-43 176.8 102 81.4
CAN.G1297.2 Capsicum annuum HOM05D001476 ORTHO05D006149 1.2e-42 176.4 104 79.8
MD04G1146700 Malus domestica HOM05D001476 ORTHO05D006149 1.2e-42 176.4 102 80.4
Nitab4.5_0011723g0020 Nicotiana tabacum HOM05D001476 ORTHO05D006149 1.2e-42 176.4 104 80.8
TAR402G0001 Trochodendron aralioides HOM05D001476 ORTHO05D006149 1.2e-42 176.4 104 79.8
Nitab4.5_0000008g0700 Nicotiana tabacum HOM05D001476 ORTHO05D006149 1.5e-42 176.0 104 79.8
Aqoxy1G00720 Aquilegia oxysepala HOM05D001476 ORTHO05D006149 2.0e-42 175.6 104 79.8
Peaxi162Scf00141g00813 Petunia axillaris HOM05D001476 ORTHO05D006149 2.0e-42 175.6 104 79.8
VMungo0331G0441 Vigna mungo HOM05D001476 ORTHO05D006149 2.0e-42 175.6 102 81.4
arahy.Tifrunner.gnm1.ann1.5UT5JQ Arachis hypogaea HOM05D001476 ORTHO05D006149 2.6e-42 175.3 102 80.4
MD12G1159900 Malus domestica HOM05D001476 ORTHO05D006149 2.6e-42 175.3 102 79.4
Nitab4.5_0004912g0100 Nicotiana tabacum HOM05D001476 ORTHO05D006149 2.6e-42 175.3 100 81.0
Glyma.01G111300 Glycine max HOM05D001476 ORTHO05D006149 3.4e-42 174.9 102 81.4
Glyma.03G076900 Glycine max HOM05D001476 ORTHO05D006149 3.4e-42 174.9 102 81.4
PGSC0003DMG400020350 Solanum tuberosum HOM05D001476 ORTHO05D006149 4.4e-42 174.5 104 78.8
unitig_699.g19385 Utricularia gibba HOM05D001476 ORTHO05D006149 5.7e-42 174.1 102 78.4
PSO832G0213 Papaver somniferum HOM05D001476 ORTHO05D006149 7.5e-42 173.7 105 81.0
ATR0618G171 Amborella trichopoda HOM05D001476 ORTHO05D006149 1.7e-41 172.6 104 79.8
Phvul.010G008300 Phaseolus vulgaris HOM05D001476 ORTHO05D006149 2.2e-41 172.2 102 79.4
Solyc09g013130.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 2.2e-41 172.2 104 77.9
Sopen09g006990 Solanum pennellii HOM05D001476 ORTHO05D006149 2.2e-41 172.2 104 77.9
ECA236G3430 Erigeron canadensis HOM05D001476 ORTHO05D006149 3.7e-41 171.4 104 76.9
PSO210G1670 Papaver somniferum HOM05D001476 ORTHO05D006149 3.7e-41 171.4 105 80.0
CDE03G0023 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 1.1e-40 169.9 102 79.4
Os03g0825700 Oryza sativa ssp. japonica HOM05D001476 ORTHO05D006149 1.4e-40 169.5 102 81.4
Zm00001eb063130 Zea mays HOM05D001476 ORTHO05D006149 1.4e-40 169.5 102 78.4
CDE04G3748 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 2.4e-40 168.7 102 79.4
HPP92_018041 Vanilla planifolia HOM05D001476 ORTHO05D006149 3.5e-39 164.9 102 77.5
Rhsim05G0205800 Rhododendron simsii HOM05D001476 ORTHO05D006149 1.3e-38 162.9 104 74.0
vmacro17485 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 1.6e-36 156.0 105 72.4
SHI12784 Sapria himalayana HOM05D001476 ORTHO05D006149 6.4e-33 144.1 102 66.7
Pp3c20_710 Physcomitrium patens HOM05D001476 ORTHO05D006149 1.2e-31 139.8 98 65.3
Mapoly0103s0063 Marchantia polymorpha HOM05D001476 ORTHO05D006149 3.3e-29 131.7 99 59.6
SMO145G0033 Selaginella moellendorffii HOM05D001476 ORTHO05D006149 3.7e-25 118.2 102 55.9
Actinidia29132 Actinidia chinensis HOM05D001476 ORTHO05D006149 2.5e-21 105.5 63 77.8
TAR636G0366 Trochodendron aralioides HOM05D001476 ORTHO05D006149 6.8e-11 70.9 53 69.8
SEGI_09667 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 1.2e-10 70.1 58 60.3
BcaC09g47968 Brassica carinata HOM05D001476 ORTHO05D006149 2.2e-09 65.9 85 43.5
Cre04.g214097 Chlamydomonas reinhardtii HOM05D001476 ORTHO05D006149 1.1e-08 63.5 70 42.9
PRCOL_00002974 Prasinoderma coloniale HOM05D001476 ORTHO05D006149 4.1e-08 61.6 54 51.9
MCO10G178 Micromonas commoda HOM05D001476 ORTHO05D006149 7.1e-08 60.8 79 35.4


User provided reference genes

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