Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund31053 Selenicereus undatus HOM05D004329 ORTHO05D026010 1.6e-25 118.6 59 100.0
Hund31064 Selenicereus undatus HOM05D004329 ORTHO05D026010 4.6e-25 117.1 59 98.3
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 4.2e-18 94.0 51 90.2
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 2.3e-16 88.2 54 81.5
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 1.1e-15 85.9 52 80.8
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 1.9e-15 85.1 52 82.7
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 1.9e-15 85.1 52 82.7
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 1.3e-14 82.4 53 81.1
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 1.7e-14 82.0 53 79.2
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 2.2e-14 81.6 53 79.2
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 2.2e-14 81.6 53 79.2
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 2.2e-14 81.6 53 79.2
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 2.2e-14 81.6 53 79.2
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 2.8e-14 81.3 53 81.1
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 6.3e-14 80.1 53 77.4
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 6.3e-14 80.1 53 79.2
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 8.2e-14 79.7 53 77.4
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 8.2e-14 79.7 53 77.4
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 1.1e-13 79.3 53 75.5
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 1.1e-13 79.3 53 75.5
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 1.1e-13 79.3 53 73.6
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 1.1e-13 79.3 53 75.5
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 1.4e-13 79.0 53 77.4
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 1.4e-13 79.0 53 75.5
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 1.8e-13 78.6 53 77.4
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 1.8e-13 78.6 53 75.5
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 2.4e-13 78.2 53 77.4
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 3.1e-13 77.8 51 78.4
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 3.1e-13 77.8 51 78.4
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 3.1e-13 77.8 53 73.6
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 4.1e-13 77.4 52 76.9
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 5.3e-13 77.0 53 73.6
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 5.3e-13 77.0 53 73.6
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 6.9e-13 76.6 53 75.5
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 9.1e-13 76.3 53 73.6
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 1.2e-12 75.9 53 73.6
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 1.2e-12 75.9 54 75.9
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.5e-12 75.5 54 72.2
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 2.6e-12 74.7 53 71.7
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 3.4e-12 74.3 53 71.7
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 4.5e-12 73.9 52 71.2
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 4.5e-12 73.9 54 75.9
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 5.9e-12 73.6 53 75.5
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 5.9e-12 73.6 53 71.7
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 5.9e-12 73.6 54 70.4
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 7.7e-12 73.2 53 71.7
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 7.7e-12 73.2 54 70.4
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 7.7e-12 73.2 52 71.2
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 7.7e-12 73.2 54 70.4
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 7.7e-12 73.2 53 75.5
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 1.0e-11 72.8 54 68.5
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 1.0e-11 72.8 54 70.4
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 1.0e-11 72.8 45 82.2
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.0e-11 72.8 45 82.2
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 1.0e-11 72.8 54 70.4
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 1.3e-11 72.4 54 70.4
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 1.3e-11 72.4 52 76.9
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 1.3e-11 72.4 54 70.4
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 1.7e-11 72.0 54 70.4
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 1.7e-11 72.0 54 72.2
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 1.7e-11 72.0 54 68.5
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 2.2e-11 71.6 44 84.1
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 2.2e-11 71.6 44 84.1
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 2.9e-11 71.2 44 84.1
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 3.8e-11 70.9 53 71.7
MBI13_g13130_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 5.0e-11 70.5 53 73.6
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 5.0e-11 70.5 54 68.5
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 5.0e-11 70.5 54 68.5
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 6.5e-11 70.1 53 69.8
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 6.5e-11 70.1 51 70.6
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 8.5e-11 69.7 54 66.7
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 8.5e-11 69.7 51 70.6
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 8.5e-11 69.7 51 68.6
Cc09_g07990 Coffea canephora HOM05D004329 ORTHO05D005516 8.5e-11 69.7 51 70.6
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 8.5e-11 69.7 55 67.3
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 8.5e-11 69.7 51 68.6
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 1.1e-10 69.3 51 66.7
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 1.1e-10 69.3 51 68.6
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 1.9e-10 68.6 46 71.7
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 1.9e-10 68.6 46 71.7
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 1.9e-10 68.6 51 66.7
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 1.9e-10 68.6 51 66.7
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 2.5e-10 68.2 51 66.7
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 3.2e-10 67.8 51 68.6
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 3.2e-10 67.8 51 66.7
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 3.2e-10 67.8 52 69.2
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 3.2e-10 67.8 46 71.7
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 4.2e-10 67.4 52 65.4
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 5.5e-10 67.0 51 64.7
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 5.5e-10 67.0 51 64.7
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 5.5e-10 67.0 51 64.7
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 5.5e-10 67.0 51 64.7
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 5.5e-10 67.0 51 64.7
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 5.5e-10 67.0 46 71.7
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 5.5e-10 67.0 49 71.4
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 7.2e-10 66.6 54 64.8
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 7.2e-10 66.6 46 69.6
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 9.4e-10 66.2 51 64.7
BcaC03g18112 Brassica carinata HOM05D004329 ORTHO05D005516 9.4e-10 66.2 51 64.7
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 1.2e-09 65.9 54 61.1
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 1.6e-09 65.5 52 65.4
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 1.6e-09 65.5 44 77.3
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 2.1e-09 65.1 51 64.7
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 2.1e-09 65.1 42 76.2
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 2.1e-09 65.1 53 64.2
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 6.1e-09 63.5 54 63.0
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 6.1e-09 63.5 54 63.0
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 7.9e-09 63.2 51 62.7
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 7.9e-09 63.2 51 62.7
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 1.4e-08 62.4 44 70.5
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 1.4e-08 62.4 49 61.2
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 2.3e-08 61.6 52 59.6
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 3.9e-08 60.8 52 63.5
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 5.1e-08 60.5 44 70.5
Solyc04g048930.1 Solanum lycopersicum HOM05D004329 ORTHO05D026010 5.1e-08 60.5 57 56.1
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 1.5e-07 58.9 45 66.7
Cc09_g07980 Coffea canephora HOM05D004329 ORTHO05D005516 3.3e-07 57.8 43 67.4
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 3.3e-07 57.8 60 60.0
Os08g0323266 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D026010 5.7e-07 57.0 43 62.8
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 7.4e-07 56.6 53 52.8
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 9.7e-07 56.2 55 60.0
Sopen02g013860 Solanum pennellii HOM05D004329 ORTHO05D026010 1.7e-06 55.5 54 57.4
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 6.3e-06 53.5 51 54.9


User provided reference genes

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