Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund28493 Selenicereus undatus HOM05D000806 ORTHO05D002320 4.3e-33 144.8 64 100.0
Hund29722 Selenicereus undatus HOM05D000806 ORTHO05D002320 4.3e-33 144.8 64 100.0
Hund08575 Selenicereus undatus HOM05D000806 ORTHO05D002320 6.0e-27 124.4 53 100.0
Hund28450 Selenicereus undatus HOM05D000680 ORTHO05D002320 6.0e-27 124.4 53 100.0
Hund29174 Selenicereus undatus HOM05D000680 ORTHO05D002320 6.0e-27 124.4 53 100.0
Hund29492 Selenicereus undatus HOM05D000806 ORTHO05D002320 6.0e-27 124.4 53 100.0
Hund29619 Selenicereus undatus HOM05D000806 ORTHO05D002320 6.0e-27 124.4 53 100.0
HanXRQChr00c0702g0576831 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
HanXRQChr01g0020371 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
HanXRQChr02g0041561 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
HanXRQChr02g0044911 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
HanXRQChr10g0283541 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
HanXRQChr10g0284231 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
HanXRQChr10g0289251 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
HanXRQChr11g0326811 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
HanXRQCPg0580021 Helianthus annuus HOM05D000806 ORTHO05D002320 3.2e-20 102.1 54 77.8
PGR111G0026 Punica granatum HOM05D000806 ORTHO05D002320 4.2e-20 101.7 54 77.8
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 5.4e-20 101.3 54 79.6
Hma1.2p1_0242F.1_g100626 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 7.1e-20 100.9 54 77.8
Hma1.2p1_0355F.1_g133923 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 7.1e-20 100.9 54 77.8
Hma1.2p1_0355F.1_g133926 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 7.1e-20 100.9 54 77.8
PSO548G0072 Papaver somniferum HOM05D000806 ORTHO05D002320 9.3e-20 100.5 54 77.8
CAN.G219.28 Capsicum annuum HOM05D001133 ORTHO05D000941 1.6e-19 99.8 54 79.6
Peaxi162Scf00021g00818 Petunia axillaris HOM05D000806 ORTHO05D002320 3.5e-19 98.6 54 75.9
Solyc00g500065.1 Solanum lycopersicum HOM05D000806 ORTHO05D002320 7.9e-19 97.4 54 74.1
Migut.L00565 Erythranthe guttata HOM05D000806 ORTHO05D002320 1.0e-18 97.1 54 74.1
Potri.013G162600 Populus trichocarpa HOM05D000806 ORTHO05D002320 1.0e-18 97.1 54 74.1
LjContig00318g0000728 Lotus japonicus HOM05D000806 ORTHO05D002320 1.3e-18 96.7 53 71.7
Sed0009930 Sechium edule HOM05D000806 ORTHO05D002320 1.7e-18 96.3 54 74.1
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.7e-18 96.3 54 74.1
CAN.G1183.3 Capsicum annuum HOM05D000806 ORTHO05D002320 3.9e-18 95.1 62 67.7
SGA_v2.0_scaffold781G53597 Striga asiatica HOM05D000806 ORTHO05D002320 3.9e-18 95.1 62 64.5
RcHm_v2.0_CPg0502101 Rosa chinensis HOM05D000806 ORTHO05D002320 5.1e-18 94.7 54 70.4
DCAR_032493 Daucus carota HOM05D000806 ORTHO05D002320 8.7e-18 94.0 55 69.1
TPR.G16839 Trifolium pratense HOM05D000806 ORTHO05D002320 4.3e-17 91.7 52 71.2
Lsat_1_v5_gn_4_69500 Lactuca sativa HOM05D000806 ORTHO05D002320 5.6e-17 91.3 54 68.5
arahy.Tifrunner.gnm1.ann1.J4M97S Arachis hypogaea HOM05D000806 ORTHO05D002320 2.1e-16 89.4 53 66.0
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.1e-15 87.0 53 66.0
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.1e-15 87.0 53 66.0
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 1.1e-15 87.0 76 53.9
Psat0s2754g0160 Pisum sativum HOM05D000806 ORTHO05D002320 3.1e-15 85.5 53 67.9
Psat0s6989g0080 Pisum sativum HOM05D000806 ORTHO05D002320 3.1e-15 85.5 53 67.9
vmacro18167 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 9.0e-15 84.0 53 67.9
vmacro18617 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 9.0e-15 84.0 53 67.9
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.2e-14 83.6 53 64.2
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.2e-14 83.6 53 64.2
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.4e-14 82.0 54 66.7
Gohir.A07G163654 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.4e-14 82.0 54 66.7
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.4e-14 82.0 54 66.7
ATCG00500 Arabidopsis thaliana HOM05D000806 ORTHO05D002320 4.5e-14 81.6 52 63.5
arahy.Tifrunner.gnm1.ann1.66QNKN Arachis hypogaea HOM05D000806 ORTHO05D038833 1.3e-13 80.1 56 60.7
Psat5g134840 Pisum sativum HOM05D000806 ORTHO05D002320 1.3e-13 80.1 58 60.3
AL2G21530 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 2.2e-13 79.3 52 61.5
Nn010s41432 Nelumbo nucifera HOM05D000806 ORTHO05D002320 2.2e-13 79.3 50 66.0
Nn010s41447 Nelumbo nucifera HOM05D000806 ORTHO05D002320 2.2e-13 79.3 50 66.0
arahy.Tifrunner.gnm1.ann1.0T2FMW Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-13 79.0 45 68.9
C02p43520 Brassica napus HOM05D000806 ORTHO05D002320 2.9e-13 79.0 52 59.6
C09p29580 Brassica napus HOM05D000806 ORTHO05D002320 2.9e-13 79.0 52 59.6
C09p40220 Brassica napus HOM05D000806 ORTHO05D002320 2.9e-13 79.0 52 59.6
BraA06t25423Z Brassica rapa HOM05D000806 ORTHO05D002320 2.9e-13 79.0 52 59.6
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 2.9e-13 79.0 52 59.6
BraSC59t46593Z Brassica rapa HOM05D000806 ORTHO05D002320 2.9e-13 79.0 52 59.6
Gohir.D13G043800 Gossypium hirsutum HOM05D000806 ORTHO05D002320 4.9e-13 78.2 54 64.8
Thhalv10011034m.g Eutrema salsugineum HOM05D000806 ORTHO05D002320 1.1e-12 77.0 52 57.7
Lj1P303T21 Lonicera japonica HOM05D000806 ORTHO05D002320 1.4e-12 76.6 59 52.5
Psat0s1586g0200 Pisum sativum HOM05D000806 ORTHO05D002320 1.4e-12 76.6 62 54.8
Lj2A1237T126 Lonicera japonica HOM05D000806 ORTHO05D002320 2.4e-12 75.9 54 55.6
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 2.4e-12 75.9 54 55.6
BolSC29t60465H Brassica oleracea HOM05D000806 ORTHO05D002320 4.2e-12 75.1 52 57.7
BolSC29t60587H Brassica oleracea HOM05D000806 ORTHO05D002320 4.2e-12 75.1 52 57.7
BolSC35t60644H Brassica oleracea HOM05D000806 ORTHO05D002320 4.2e-12 75.1 52 57.7
BolSC35t60752H Brassica oleracea HOM05D000806 ORTHO05D002320 4.2e-12 75.1 52 57.7
BolSC47t61099H Brassica oleracea HOM05D000806 ORTHO05D002320 4.2e-12 75.1 52 57.7
BolSC49t61185H Brassica oleracea HOM05D000806 ORTHO05D002320 4.2e-12 75.1 52 57.7
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.5e-11 72.0 54 59.3
BolC9t55819H Brassica oleracea HOM05D000806 ORTHO05D002320 1.0e-10 70.5 49 57.1
Phvul.002G278116 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 6.7e-10 67.8 49 55.1
SEGI_25777 Sequoiadendron giganteum HOM05D000806 ORTHO05D003511 2.8e-08 62.4 61 45.9
SEGI_40898 Sequoiadendron giganteum HOM05D000806 ORTHO05D003511 2.8e-08 62.4 61 45.9
AL2G20668 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 1.4e-07 60.1 33 69.7
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.4e-07 59.3 39 64.1
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 9.0e-07 57.4 28 78.6
Gorai.003G066100 Gossypium raimondii HOM05D000806 ORTHO05D002320 1.5e-06 56.6 52 48.1
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 2.6e-06 55.8 28 75.0
HanXRQChr10g0318221 Helianthus annuus HOM05D000806 ORTHO05D002320 3.4e-06 55.5 29 72.4
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 4.5e-06 55.1 29 72.4
Eucgr.I02537 Eucalyptus grandis HOM05D000806 ORTHO05D002320 5.8e-06 54.7 32 62.5
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 5.8e-06 54.7 28 75.0
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 7.6e-06 54.3 29 72.4
Peaxi162Scf00937g00111 Petunia axillaris HOM05D000806 ORTHO05D002320 7.6e-06 54.3 29 72.4
Peaxi162Scf01064g00230 Petunia axillaris HOM05D000806 ORTHO05D002320 7.6e-06 54.3 29 72.4


User provided reference genes

Program Settings