Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund28420 Selenicereus undatus HOM05D000212 ORTHO05D005509 1.7e-69 265.8 128 100.0
Hund28422 Selenicereus undatus HOM05D000212 ORTHO05D005509 1.7e-69 265.8 128 100.0
Hund00191 Selenicereus undatus HOM05D000212 ORTHO05D005509 5.0e-48 194.5 189 58.2
Solyc01g111630.3 Solanum lycopersicum HOM05D000212 ORTHO05D005509 8.7e-45 183.7 189 52.9
Hund01460 Selenicereus undatus HOM05D000212 ORTHO05D005509 1.1e-44 183.3 114 80.7
Sopen01g053670 Solanum pennellii HOM05D000212 ORTHO05D005509 1.1e-44 183.3 189 52.4
AUR62013028 Chenopodium quinoa HOM05D000212 ORTHO05D005509 1.5e-44 183.0 189 54.0
AUR62043666 Chenopodium quinoa HOM05D000212 ORTHO05D005509 1.5e-44 183.0 189 54.0
Dinv41936 Davidia involucrata HOM05D000212 ORTHO05D005509 1.9e-44 182.6 189 54.5
EL10Ac9g21375 Beta vulgaris HOM05D000212 ORTHO05D005509 2.5e-44 182.2 189 54.5
CSS0004363 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D005509 1.3e-43 179.9 189 52.9
DCAR_022947 Daucus carota HOM05D000212 ORTHO05D005509 1.3e-43 179.9 189 54.0
CANSAT25G2634 Cannabis sativa HOM05D000212 ORTHO05D005509 1.6e-43 179.5 189 54.5
FvH4_5g30340 Fragaria vesca HOM05D000212 ORTHO05D005509 1.6e-43 179.5 189 54.0
Potri.004G175800 Populus trichocarpa HOM05D000212 ORTHO05D005509 2.2e-43 179.1 189 53.4
Eucgr.I01423 Eucalyptus grandis HOM05D000212 ORTHO05D005509 2.8e-43 178.7 189 53.4
Aqoxy6G02140 Aquilegia oxysepala HOM05D000212 ORTHO05D005509 3.7e-43 178.3 189 52.9
ECA246G1556 Erigeron canadensis HOM05D000212 ORTHO05D005509 8.2e-43 177.2 189 52.4
Prupe.7G264000 Prunus persica HOM05D000212 ORTHO05D005509 8.2e-43 177.2 189 52.4
Thecc.02G059100 Theobroma cacao HOM05D000212 ORTHO05D005509 8.2e-43 177.2 189 52.4
PGSC0003DMG400006186 Solanum tuberosum HOM05D000212 ORTHO05D005509 1.1e-42 176.8 189 51.3
unitig_899.g15611 Utricularia gibba HOM05D000212 ORTHO05D005509 1.1e-42 176.8 189 51.9
MD05G1122100 Malus domestica HOM05D000212 ORTHO05D005509 1.4e-42 176.4 189 51.9
Sc08g0002900 Simmondsia chinensis HOM05D000212 ORTHO05D005509 1.4e-42 176.4 189 52.4
Actinidia21457 Actinidia chinensis HOM05D000212 ORTHO05D005509 1.8e-42 176.0 189 52.4
Nn5g30798 Nelumbo nucifera HOM05D000212 ORTHO05D005509 1.8e-42 176.0 188 52.7
Duzib132G0804 Durio zibethinus HOM05D000212 ORTHO05D005509 2.4e-42 175.6 189 51.3
Manes.04G076300 Manihot esculenta HOM05D000212 ORTHO05D005509 2.4e-42 175.6 189 52.9
RcHm_v2.0_Chr7g0224761 Rosa chinensis HOM05D000212 ORTHO05D005509 2.4e-42 175.6 189 52.9
TWI79G0672 Tripterygium wilfordii HOM05D000212 ORTHO05D005509 2.4e-42 175.6 189 53.4
TAR381G1304 Trochodendron aralioides HOM05D000212 ORTHO05D005509 2.4e-42 175.6 189 52.4
Cfa005249 Carpinus fangiana HOM05D000212 ORTHO05D005509 3.1e-42 175.3 189 51.9
Prupe.8G166000 Prunus persica HOM05D000212 ORTHO05D005509 3.1e-42 175.3 189 51.9
Lsat_1_v5_gn_3_46860 Lactuca sativa HOM05D000212 ORTHO05D005509 4.1e-42 174.9 189 52.4
Hma1.2p1_0163F.1_g072520 Hydrangea macrophylla HOM05D000212 ORTHO05D005509 5.3e-42 174.5 189 52.4
Ciclev10028639m.g Citrus clementina HOM05D000212 ORTHO05D005509 6.9e-42 174.1 189 51.9
Dinv14109 Davidia involucrata HOM05D000212 ORTHO05D005509 9.0e-42 173.7 196 52.0
Lalb_Chr06g0163651 Lupinus albus HOM05D000212 ORTHO05D005509 1.2e-41 173.3 189 52.9
GSVIVG01024012001 Vitis vinifera HOM05D000212 ORTHO05D005509 1.2e-41 173.3 189 52.4
Cpa.g.sc20.87 Carica papaya HOM05D000212 ORTHO05D005509 2.0e-41 172.6 190 51.1
CiPaw.05G082600 Carya illinoinensis HOM05D000212 ORTHO05D005509 2.0e-41 172.6 189 51.3
HanXRQChr17g0544201 Helianthus annuus HOM05D000212 ORTHO05D005509 2.0e-41 172.6 189 51.9
Lalb_Chr21g0306931 Lupinus albus HOM05D000212 ORTHO05D005509 2.0e-41 172.6 189 52.4
Medtr1g112510 Medicago truncatula HOM05D000212 ORTHO05D005509 2.0e-41 172.6 189 51.9
Gohir.D01G160100 Gossypium hirsutum HOM05D000212 ORTHO05D005509 2.6e-41 172.2 189 49.7
Gorai.002G198600 Gossypium raimondii HOM05D000212 ORTHO05D005509 2.6e-41 172.2 189 49.7
Os02g0101500 Oryza sativa ssp. japonica HOM05D000212 ORTHO05D005509 3.4e-41 171.8 189 51.3
VMungo0720G0733 Vigna mungo HOM05D000212 ORTHO05D005509 4.5e-41 171.4 189 51.9
Glyma.10G281400 Glycine max HOM05D000212 ORTHO05D005509 7.7e-41 170.6 189 51.3
Lalb_Chr02g0143391 Lupinus albus HOM05D000212 ORTHO05D005509 1.0e-40 170.2 189 51.3
Phvul.007G019300 Phaseolus vulgaris HOM05D000212 ORTHO05D005509 1.3e-40 169.9 189 51.3
Peaxi162Scf00362g00646 Petunia axillaris HOM05D000212 ORTHO05D005509 1.7e-40 169.5 205 48.3
THA.LOC104824763 Tarenaya hassleriana HOM05D000212 ORTHO05D005509 2.2e-40 169.1 189 49.7
TPR.G36351 Trifolium pratense HOM05D000212 ORTHO05D005509 2.2e-40 169.1 189 51.9
FAN18G0770 Fragaria x ananassa HOM05D000212 ORTHO05D005509 2.9e-40 168.7 183 53.0
Gohir.A01G169100 Gossypium hirsutum HOM05D000212 ORTHO05D005509 2.9e-40 168.7 189 49.2
PSO675G7560 Papaver somniferum HOM05D000212 ORTHO05D005509 2.9e-40 168.7 189 49.7
PSO541G1525 Papaver somniferum HOM05D000212 ORTHO05D005509 3.8e-40 168.3 189 49.2
Psat6g231880 Pisum sativum HOM05D000212 ORTHO05D005509 5.0e-40 167.9 189 51.3
MSTRG.5454 Avicennia marina HOM05D000212 ORTHO05D005509 6.5e-40 167.5 189 50.3
Sp5g23030 Schrenkiella parvula HOM05D000212 ORTHO05D005509 6.5e-40 167.5 189 48.7
SGA_v2.0_scaffold207G41924 Striga asiatica HOM05D000212 ORTHO05D005509 6.5e-40 167.5 159 56.0
BcaB03g15139 Brassica carinata HOM05D000212 ORTHO05D005509 8.5e-40 167.2 189 49.2
BcaB03g15394 Brassica carinata HOM05D000212 ORTHO05D005509 8.5e-40 167.2 189 49.2
BcaNung05109 Brassica carinata HOM05D000212 ORTHO05D005509 8.5e-40 167.2 189 49.2
Thhalv10018534m.g Eutrema salsugineum HOM05D000212 ORTHO05D005509 8.5e-40 167.2 189 49.2
Carub.0002s1449 Capsella rubella HOM05D000212 ORTHO05D005509 1.1e-39 166.8 189 48.7
SalBow7G0649 Salvia bowleyana HOM05D000212 ORTHO05D005509 1.9e-39 166.0 200 47.5
SalBow7G2155 Salvia bowleyana HOM05D000212 ORTHO05D005509 1.9e-39 166.0 200 47.5
AL2G26910 Arabidopsis lyrata HOM05D000212 ORTHO05D005509 2.5e-39 165.6 189 48.7
Glyma.20G107800 Glycine max HOM05D000212 ORTHO05D005509 3.2e-39 165.2 189 50.3
Hma1.2p1_0163F.1_g072510 Hydrangea macrophylla HOM05D000212 ORTHO05D005509 3.2e-39 165.2 184 51.1
Aa31LG11G2730 Aethionema arabicum HOM05D000212 ORTHO05D005509 4.2e-39 164.9 182 50.0
CsaV3_7G001060 Cucumis sativus L. HOM05D000212 ORTHO05D005509 4.2e-39 164.9 184 50.5
Oeu005702.1 Olea europaea HOM05D000212 ORTHO05D005509 5.5e-39 164.5 196 49.5
THA.LOC104807808 Tarenaya hassleriana HOM05D000212 ORTHO05D005509 5.5e-39 164.5 185 50.3
Ca_11207_v3 Cicer arietinum L. HOM05D000212 ORTHO05D005509 7.2e-39 164.1 189 50.8
Sed0017644 Sechium edule HOM05D000212 ORTHO05D005509 9.4e-39 163.7 189 49.7
AT1G68010 Arabidopsis thaliana HOM05D000212 ORTHO05D005509 1.2e-38 163.3 189 48.1
CDE02G3685 Ceratophyllum demersum HOM05D000212 ORTHO05D005509 1.2e-38 163.3 192 47.4
CDE04G1730 Ceratophyllum demersum HOM05D000212 ORTHO05D005509 1.6e-38 162.9 189 47.6
Zm00001eb229250 Zea mays HOM05D000212 ORTHO05D005509 1.6e-38 162.9 183 49.7
Cc09_g10170 Coffea canephora HOM05D000212 ORTHO05D005509 2.1e-38 162.5 193 48.7
FAN13G2675 Fragaria x ananassa HOM05D000212 ORTHO05D005509 2.1e-38 162.5 189 51.3
Ah.01g023040 Amaranthus hybridus HOM05D000212 ORTHO05D005509 4.6e-38 161.4 171 53.2
Sabra04G0117700 Salix brachista HOM05D000212 ORTHO05D005509 1.0e-37 160.2 179 50.8
BcaC08g46227 Brassica carinata HOM05D000212 ORTHO05D005509 1.8e-37 159.5 195 47.2
A07p34520 Brassica napus HOM05D000212 ORTHO05D005509 5.1e-37 157.9 184 47.8
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 5.1e-37 157.9 184 47.8
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 5.1e-37 157.9 184 47.8
COL.COLO4_17344 Corchorus olitorius HOM05D000212 ORTHO05D005509 6.7e-37 157.5 149 55.0
SMO145G0129 Selaginella moellendorffii HOM05D000212 ORTHO05D005509 1.1e-36 156.8 189 47.1
Nitab4.5_0000283g0400 Nicotiana tabacum HOM05D000212 ORTHO05D005509 1.3e-35 153.3 178 48.9
Nitab4.5_0003914g0050 Nicotiana tabacum HOM05D000212 ORTHO05D005509 1.3e-35 153.3 178 48.9
vmacro17343 Vaccinium macrocarpon HOM05D000212 ORTHO05D005509 1.7e-35 152.9 183 50.3
Lj5g0017900 Lotus japonicus HOM05D000212 ORTHO05D005509 2.2e-35 152.5 183 48.6
Rhsim05G0056500 Rhododendron simsii HOM05D000212 ORTHO05D005509 2.2e-35 152.5 180 50.0
ATR0180G008 Amborella trichopoda HOM05D000212 ORTHO05D005509 2.8e-35 152.1 189 45.0
Haze_02134 Corylus avellana HOM05D000212 ORTHO05D005509 1.1e-34 150.2 185 48.1
BcaC08g46003 Brassica carinata HOM05D000212 ORTHO05D005509 3.1e-34 148.7 180 47.8
FAN08G0938 Fragaria x ananassa HOM05D000212 ORTHO05D005509 3.1e-34 148.7 171 50.9
CAN.G588.84 Capsicum annuum HOM05D000212 ORTHO05D005509 4.1e-34 148.3 176 48.3
CARHR060660 Cardamine hirsuta HOM05D000212 ORTHO05D005509 6.9e-34 147.5 177 46.9
Lj5C178T12 Lonicera japonica HOM05D000212 ORTHO05D005509 2.6e-33 145.6 178 46.6
CiPaw.06G121600 Carya illinoinensis HOM05D000212 ORTHO05D005509 4.5e-33 144.8 177 48.6
arahy.Tifrunner.gnm1.ann1.71EHKP Arachis hypogaea HOM05D000212 ORTHO05D005509 7.7e-33 144.1 170 50.0
ClCG02G004060 Citrullus lanatus HOM05D000212 ORTHO05D005509 1.0e-32 143.7 171 49.1
MBI08_g29141_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D005509 1.0e-32 143.7 177 45.8
Pp3c19_20080 Physcomitrium patens HOM05D000212 ORTHO05D005509 1.0e-32 143.7 186 45.2
CBR_g49204 Chara braunii HOM05D000212 ORTHO05D005509 2.2e-32 142.5 185 43.8
arahy.Tifrunner.gnm1.ann1.KVXN1E Arachis hypogaea HOM05D000212 ORTHO05D005509 5.0e-32 141.4 104 71.2
QL11p050728 Quercus lobata HOM05D000212 ORTHO05D005509 5.0e-32 141.4 118 64.4
HPP92_022190 Vanilla planifolia HOM05D000212 ORTHO05D005509 1.1e-31 140.2 179 44.7
MELO3C013350.2 Cucumis melo HOM05D000212 ORTHO05D005509 2.5e-31 139.0 206 42.7
Migut.N01323 Erythranthe guttata HOM05D000212 ORTHO05D005509 3.2e-31 138.7 104 68.3
AagrBONN_evm.TU.Sc2ySwM_117.3207 Anthoceros agrestis HOM05D000212 ORTHO05D005509 5.5e-31 137.9 186 42.5
Mapoly0015s0044 Marchantia polymorpha HOM05D000212 ORTHO05D005509 5.5e-31 137.9 190 42.6
SalBow7G0410 Salvia bowleyana HOM05D000212 ORTHO05D005509 7.2e-31 137.5 85 74.1
CAN.G1040.7 Capsicum annuum HOM05D000212 ORTHO05D005509 6.1e-30 134.4 171 44.4
Ah.01g008420 Amaranthus hybridus HOM05D000212 ORTHO05D005509 1.1e-28 130.2 169 46.7
Pp3c18_12500 Physcomitrium patens HOM05D000212 ORTHO05D005509 2.2e-27 125.9 185 41.1
Actinidia28255 Actinidia chinensis HOM05D000212 ORTHO05D005509 4.1e-26 121.7 77 76.6
Actinidia33560 Actinidia chinensis HOM05D000212 ORTHO05D005509 4.1e-26 121.7 77 76.6
CAN.G937.5 Capsicum annuum HOM05D000212 ORTHO05D005509 4.5e-25 118.2 130 47.7
CAN.G518.15 Capsicum annuum HOM05D000212 ORTHO05D005509 5.0e-24 114.8 116 54.3
PGR142G1333 Punica granatum HOM05D000212 ORTHO05D005509 3.6e-22 108.6 143 45.5
CAN.G798.47 Capsicum annuum HOM05D000212 ORTHO05D005509 2.4e-18 95.9 173 35.8
Atru.chr5.3324 Acer truncatum HOM05D000212 ORTHO05D005509 1.7e-16 89.7 86 57.0
SEGI_26169 Sequoiadendron giganteum HOM05D000212 ORTHO05D005509 8.5e-16 87.4 59 71.2
Cpa.g.sc20.88 Carica papaya HOM05D000212 ORTHO05D005509 5.5e-15 84.7 94 47.9
Haze_23674 Corylus avellana HOM05D000212 ORTHO05D030821 9.4e-15 84.0 55 72.7
Cre06.g295450 Chlamydomonas reinhardtii HOM05D000212 ORTHO05D005509 4.7e-14 81.6 184 34.2
PRCOL_00005045 Prasinoderma coloniale HOM05D000212 ORTHO05D005509 1.0e-13 80.5 116 43.1
TAR633G2032 Trochodendron aralioides HOM05D000212 ORTHO05D005509 1.8e-13 79.7 54 72.2
CAN.G426.19 Capsicum annuum HOM05D000212 ORTHO05D005509 8.8e-13 77.4 67 61.2
RcHm_v2.0_Chr7g0224721 Rosa chinensis HOM05D000212 ORTHO05D005509 2.8e-11 72.4 39 87.2
Atru.chr5.3323 Acer truncatum HOM05D000212 ORTHO05D005509 7.0e-10 67.8 41 73.2
MBI08_g39930_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D005509 2.7e-09 65.9 81 45.7
Lsat_1_v5_gn_2_53700 Lactuca sativa HOM05D000212 ORTHO05D005509 1.3e-08 63.5 51 64.7
SEGI_20354 Sequoiadendron giganteum HOM05D000212 ORTHO05D000001 1.9e-07 59.7 47 55.3
SalBow1G2308 Salvia bowleyana HOM05D000212 ORTHO05D005509 4.7e-06 55.1 114 32.5


User provided reference genes

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