Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 1.4e-72 276.2 142 100.0
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.0e-65 253.4 143 90.2
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.2e-65 252.3 143 89.5
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 9.3e-64 246.9 143 88.1
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 1.9e-56 222.6 145 82.1
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 1.2e-55 219.9 146 81.5
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 2.1e-55 219.2 144 81.2
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 6.1e-55 217.6 144 81.9
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 1.3e-54 216.5 145 82.1
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 2.3e-54 215.7 145 80.7
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 2.3e-54 215.7 144 80.6
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 3.0e-54 215.3 143 79.0
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 3.0e-54 215.3 143 79.0
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 81.4
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 3.9e-54 214.9 145 80.7
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 6.7e-54 214.2 143 78.3
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.7e-54 214.2 145 80.0
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 6.7e-54 214.2 145 80.0
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 8.7e-54 213.8 145 80.0
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.7e-54 213.8 146 82.2
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 8.7e-54 213.8 145 80.7
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 8.7e-54 213.8 143 81.8
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 8.7e-54 213.8 144 81.2
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 8.7e-54 213.8 144 83.3
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.1e-53 213.4 143 83.9
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.9e-53 212.6 145 79.3
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.9e-53 212.6 144 80.6
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 3.3e-53 211.8 146 79.5
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 5.7e-53 211.1 144 80.6
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 5.7e-53 211.1 146 78.8
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 7.4e-53 210.7 142 80.3
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 7.4e-53 210.7 145 82.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 7.4e-53 210.7 143 76.9
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 7.4e-53 210.7 145 79.3
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 9.7e-53 210.3 143 76.2
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 1.3e-52 209.9 144 80.6
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.6e-52 209.5 142 78.2
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 1.6e-52 209.5 142 78.2
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 1.6e-52 209.5 143 76.2
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.6e-52 209.5 143 76.2
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 2.8e-52 208.8 145 80.7
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 2.8e-52 208.8 146 78.1
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 3.7e-52 208.4 145 80.0
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 4.8e-52 208.0 146 80.1
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 6.3e-52 207.6 145 75.9
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 6.3e-52 207.6 144 80.6
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 8.2e-52 207.2 145 79.3
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 8.2e-52 207.2 145 79.3
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 8.2e-52 207.2 142 79.6
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 8.2e-52 207.2 141 78.7
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.1e-51 206.8 141 79.4
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 1.1e-51 206.8 143 76.9
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.4e-51 206.5 145 78.6
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 1.8e-51 206.1 145 78.6
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 4.1e-51 204.9 145 77.2
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 4.1e-51 204.9 146 78.1
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 5.3e-51 204.5 145 77.9
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 5.3e-51 204.5 145 77.9
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 5.3e-51 204.5 143 76.9
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 5.3e-51 204.5 145 77.9
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 6.9e-51 204.1 145 78.6
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 6.9e-51 204.1 145 77.2
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 6.9e-51 204.1 144 79.2
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 9.1e-51 203.8 145 78.6
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 9.1e-51 203.8 145 77.9
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 9.1e-51 203.8 147 74.8
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 9.1e-51 203.8 145 79.3
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.2e-50 203.4 145 77.9
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.2e-50 203.4 145 77.2
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.2e-50 203.4 140 76.4
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 1.5e-50 203.0 145 77.2
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 1.5e-50 203.0 145 77.2
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.5e-50 203.0 158 72.8
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 2.0e-50 202.6 145 77.9
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 2.0e-50 202.6 145 77.9
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 3.4e-50 201.8 145 76.6
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 3.4e-50 201.8 145 76.6
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 3.4e-50 201.8 145 76.6
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 3.4e-50 201.8 145 76.6
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 3.4e-50 201.8 145 76.6
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.4e-50 201.8 145 78.6
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 4.5e-50 201.4 145 76.6
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 5.9e-50 201.1 145 76.6
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 5.9e-50 201.1 145 77.9
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 5.9e-50 201.1 145 77.9
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 5.9e-50 201.1 140 77.1
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 1.0e-49 200.3 146 78.1
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.0e-49 200.3 145 77.9
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.3e-49 199.9 145 77.9
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 1.7e-49 199.5 143 78.3
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.2e-49 199.1 145 78.6
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 5.0e-49 198.0 148 78.4
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 5.0e-49 198.0 141 76.6
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 5.0e-49 198.0 145 77.9
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 5.0e-49 198.0 146 77.4
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 5.0e-49 198.0 152 75.7
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 6.5e-49 197.6 145 75.9
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 6.5e-49 197.6 146 76.0
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 6.5e-49 197.6 149 77.2
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.5e-49 197.2 145 75.9
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.9e-48 196.1 145 75.9
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.9e-48 196.1 145 75.2
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 3.2e-48 195.3 145 76.6
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.2e-48 195.3 145 76.6
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 4.2e-48 194.9 144 75.7
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 4.2e-48 194.9 145 75.9
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 7.2e-48 194.1 134 80.6
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 1.2e-47 193.4 144 77.8
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 1.6e-47 193.0 143 74.1
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.6e-47 193.0 129 80.6
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 2.1e-47 192.6 128 80.5
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 3.6e-47 191.8 144 76.4
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 3.6e-47 191.8 144 76.4
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 6.1e-47 191.0 145 73.8
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 6.1e-47 191.0 130 80.8
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 6.1e-47 191.0 131 80.9
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 6.1e-47 191.0 144 74.3
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 6.1e-47 191.0 144 74.3
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 6.1e-47 191.0 144 74.3
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 7.9e-47 190.7 144 75.0
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.4e-46 189.9 130 79.2
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 5.1e-46 188.0 143 73.4
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 6.7e-46 187.6 143 74.8
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 8.8e-46 187.2 149 72.5
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 1.5e-45 186.4 133 77.4
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.7e-44 181.8 143 71.3
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 3.7e-44 181.8 127 77.2
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 8.2e-44 180.6 201 56.7
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 8.2e-44 180.6 129 77.5
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 1.1e-43 180.3 180 62.8
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 5.3e-43 177.9 144 73.6
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.3e-43 177.9 150 71.3
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.2e-42 176.8 147 70.1
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 4.5e-42 174.9 142 69.0
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 5.9e-42 174.5 129 74.4
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 5.9e-42 174.5 110 83.6
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 8.5e-41 170.6 95 87.4
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.9e-40 169.5 145 71.0
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 4.2e-40 168.3 142 66.2
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 5.5e-40 167.9 167 62.9
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 9.4e-40 167.2 142 69.7
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.2e-39 166.8 131 72.5
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 2.1e-39 166.0 121 78.5
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.7e-39 165.6 135 72.6
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 4.7e-39 164.9 143 69.9
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 6.1e-39 164.5 145 64.8
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 1.0e-38 163.7 146 67.1
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.0e-38 163.7 144 67.4
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 8.8e-38 160.6 119 74.8
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 9.7e-37 157.1 138 68.1
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.3e-36 156.8 90 84.4
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.3e-36 156.8 145 67.6
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.6e-34 149.8 127 67.7
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.5e-34 148.3 121 74.4
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.9e-33 145.6 113 72.6
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 4.7e-31 138.3 98 70.4
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 1.0e-30 137.1 126 60.3
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 8.8e-30 134.0 107 72.9
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 2.6e-29 132.5 115 63.5
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 5.7e-29 131.3 121 66.9
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 3.7e-28 128.6 130 61.5
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.6e-26 123.2 142 54.2
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 4.5e-26 121.7 110 63.6
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 5.9e-26 121.3 69 82.6
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 2.9e-25 119.0 99 71.7
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.0e-25 118.2 64 87.5
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 2.5e-24 115.9 102 67.6
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.4e-21 105.5 119 58.0
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.4e-21 105.5 119 58.0
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 7.5e-21 104.4 129 50.4
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 9.8e-21 104.0 133 48.9
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 9.8e-21 104.0 105 68.6
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 1.4e-19 100.1 97 66.0
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.4e-19 99.4 143 51.0
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 3.1e-19 99.0 87 60.9
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 1.0e-17 94.0 45 93.3
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 2.1e-15 86.3 73 67.1
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 8.9e-14 80.9 75 64.0
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 8.9e-14 80.9 76 63.2
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 2.6e-13 79.3 75 65.3
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 1.3e-12 77.0 79 63.3
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3


User provided reference genes

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