Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.9e-125 451.8 216 100.0
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 8.8e-90 334.0 217 74.7
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.7e-85 319.7 217 70.0
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 8.5e-85 317.4 216 70.4
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 2.5e-84 315.8 216 69.9
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 6.3e-80 301.2 216 66.7
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.0e-74 283.9 217 63.1
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 5.7e-73 278.1 217 60.8
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 2.9e-72 275.8 220 61.8
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 2.9e-72 275.8 216 63.4
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 3.7e-72 275.4 218 61.9
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 4.9e-72 275.0 217 61.8
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 4.1e-71 271.9 216 63.0
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 2.7e-70 269.2 217 62.2
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 4.6e-70 268.5 173 69.9
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 7.8e-70 267.7 218 61.5
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 3.9e-69 265.4 222 60.4
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 5.0e-69 265.0 185 65.4
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 5.0e-69 265.0 168 70.8
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 5.0e-69 265.0 217 59.9
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 6.6e-69 264.6 217 60.4
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 8.6e-69 264.2 218 58.3
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 8.6e-69 264.2 218 58.3
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.1e-68 263.8 218 56.9
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 2.5e-68 262.7 172 69.8
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 4.3e-68 261.9 217 60.8
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 5.6e-68 261.5 217 58.5
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 5.6e-68 261.5 221 61.5
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 7.3e-68 261.2 218 61.0
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 2.1e-67 259.6 218 59.6
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 4.7e-67 258.5 218 58.3
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 4.7e-67 258.5 218 57.3
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.7e-67 258.5 222 60.4
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 6.2e-67 258.1 216 58.8
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 6.2e-67 258.1 216 58.8
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.0e-66 257.3 219 59.4
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.0e-66 257.3 222 61.3
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 1.0e-66 257.3 208 61.1
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 1.4e-66 256.9 219 57.1
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.4e-66 256.9 221 60.6
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.8e-66 256.5 163 69.9
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 1.8e-66 256.5 219 59.8
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 3.1e-66 255.8 218 57.3
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 5.2e-66 255.0 216 60.6
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 8.9e-66 254.2 205 61.5
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 1.2e-65 253.8 216 58.8
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 2.6e-65 252.7 216 58.8
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 2.6e-65 252.7 173 65.3
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 3.4e-65 252.3 216 58.3
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 3.4e-65 252.3 159 70.4
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 5.8e-65 251.5 216 58.3
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 5.8e-65 251.5 216 58.3
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.3e-64 250.4 219 56.6
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 1.7e-64 250.0 216 58.3
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 2.9e-64 249.2 168 69.0
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 4.9e-64 248.4 224 58.0
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 8.3e-64 247.7 172 67.4
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 1.4e-63 246.9 218 57.3
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 1.9e-63 246.5 201 61.2
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.9e-63 246.5 175 65.7
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 2.4e-63 246.1 158 69.0
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 2.4e-63 246.1 168 68.5
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 4.1e-63 245.4 183 63.9
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 5.4e-63 245.0 158 68.4
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 1.2e-62 243.8 158 71.5
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.2e-62 243.8 218 56.4
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 2.7e-62 242.7 216 55.6
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 6.0e-62 241.5 159 67.9
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 3.0e-61 239.2 219 56.2
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 5.0e-61 238.4 141 75.2
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.5e-60 236.9 216 52.3
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.9e-60 236.5 141 73.8
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 9.5e-60 234.2 221 52.5
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.2e-59 233.8 161 66.5
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 1.6e-59 233.4 147 70.1
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 3.6e-59 232.3 220 54.1
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 4.7e-59 231.9 145 71.7
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 6.2e-59 231.5 183 59.6
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 1.4e-58 230.3 145 70.3
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 2.3e-58 229.6 141 72.3
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 5.8e-57 224.9 145 68.3
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 9.8e-57 224.2 145 68.3
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 9.8e-57 224.2 145 68.3
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 9.8e-57 224.2 145 68.3
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 9.8e-57 224.2 156 62.2
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 6.4e-56 221.5 145 66.9
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 2.7e-54 216.1 155 65.2
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 7.8e-54 214.5 147 67.3
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 5.6e-52 208.4 154 60.4
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 8.1e-51 204.5 135 67.4
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 4.9e-48 195.3 158 57.6
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 5.6e-44 181.8 186 46.8
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 1.6e-43 180.3 134 57.5
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 2.4e-42 176.4 151 54.3
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 5.8e-41 171.8 139 60.4
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 2.9e-40 169.5 143 50.3
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 3.9e-37 159.1 143 51.0
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 1.4e-34 150.6 152 48.0
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 2.4e-34 149.8 108 61.1
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 6.7e-29 131.7 82 72.0
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.1e-28 131.0 146 47.9
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 5.6e-28 128.6 145 41.4
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.5e-25 119.0 139 42.4
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 6.7e-21 105.1 52 84.6
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 5.6e-20 102.1 156 37.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 6.5e-16 88.6 54 77.8
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 4.3e-12 75.9 44 75.0
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 6.1e-06 55.5 71 39.4


User provided reference genes

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