Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 5.8e-214 747.3 373 100.0
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 8.8e-138 494.2 322 73.6
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 2.6e-137 492.7 317 73.8
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 5.9e-134 481.5 317 73.2
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.5e-132 476.9 322 71.1
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 4.2e-132 475.3 339 67.6
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 7.2e-132 474.6 337 68.2
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 2.1e-131 473.0 366 66.1
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 6.1e-131 471.5 349 66.8
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 6.1e-131 471.5 327 69.7
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 3.0e-130 469.2 347 66.0
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 6.8e-130 468.0 360 66.7
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 6.8e-130 468.0 311 70.1
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 2.6e-129 466.1 356 64.6
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 3.4e-129 465.7 333 67.9
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 4.4e-129 465.3 306 73.9
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 4.4e-129 465.3 340 66.8
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 9.8e-129 464.2 350 65.1
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 1.7e-128 463.4 357 64.1
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 2.2e-128 463.0 344 65.4
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 8.3e-128 461.1 309 70.6
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 1.1e-127 460.7 325 68.9
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 1.1e-127 460.7 345 65.2
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 1.4e-127 460.3 333 67.9
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 1.8e-127 459.9 333 67.9
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 1.8e-127 459.9 338 68.3
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 1.8e-127 459.9 314 70.1
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.4e-127 459.5 326 67.5
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 3.1e-127 459.1 307 71.3
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 4.1e-127 458.8 307 70.7
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 4.1e-127 458.8 350 65.4
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 7.0e-127 458.0 279 78.9
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 7.0e-127 458.0 325 67.7
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 9.1e-127 457.6 324 68.8
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 1.2e-126 457.2 355 63.7
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 1.2e-126 457.2 307 71.3
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.6e-126 456.8 343 65.3
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 3.5e-126 455.7 327 68.5
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 4.5e-126 455.3 307 70.4
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 4.5e-126 455.3 308 71.1
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 7.7e-126 454.5 335 67.5
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.0e-125 454.1 323 67.8
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 1.7e-125 453.4 344 66.3
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 2.3e-125 453.0 358 64.2
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 2.3e-125 453.0 358 64.2
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.9e-125 452.6 352 64.2
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 6.5e-125 451.4 359 63.0
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 1.5e-124 450.3 307 70.0
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 2.5e-124 449.5 342 66.7
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 5.5e-124 448.4 353 63.5
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 5.5e-124 448.4 335 66.3
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 7.2e-124 448.0 320 68.8
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 1.6e-123 446.8 310 69.0
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 3.6e-123 445.7 323 65.9
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 4.7e-123 445.3 356 62.9
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 4.7e-123 445.3 308 67.9
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 1.4e-122 443.7 322 65.5
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 3.0e-122 442.6 315 67.9
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 5.2e-122 441.8 325 65.8
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 1.5e-121 440.3 321 66.0
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 1.5e-121 440.3 310 68.7
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 1.5e-121 440.3 322 65.8
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 2.0e-121 439.9 323 65.6
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 3.4e-121 439.1 310 68.4
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.3e-120 437.2 311 66.6
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 1.7e-120 436.8 332 64.8
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 1.7e-120 436.8 356 63.2
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 2.8e-120 436.0 341 63.0
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 3.7e-120 435.6 307 66.8
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 1.6e-118 430.3 358 62.0
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 4.5e-118 428.7 310 64.8
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 5.9e-118 428.3 311 65.9
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 2.3e-117 426.4 351 63.2
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 1.9e-116 423.3 352 60.8
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 1.9e-116 423.3 317 64.7
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 4.3e-116 422.2 317 64.7
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 2.8e-115 419.5 385 58.4
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 6.1e-115 418.3 320 67.8
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 1.0e-114 417.5 309 64.7
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 1.8e-114 416.8 351 61.5
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 3.0e-114 416.0 321 62.0
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 4.0e-114 415.6 321 62.0
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 1.2e-113 414.1 291 69.8
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 1.2e-113 414.1 352 58.5
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 1.2e-113 414.1 347 58.8
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 1.5e-113 413.7 309 65.0
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 4.1e-111 405.6 313 63.9
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 1.6e-110 403.7 310 63.5
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 2.7e-110 402.9 318 63.8
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 3.5e-110 402.5 283 68.2
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 1.3e-109 400.6 341 58.9
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 2.3e-109 399.8 318 61.6
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 3.0e-109 399.4 362 60.5
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 3.0e-109 399.4 341 59.5
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 8.6e-109 397.9 318 61.3
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 8.6e-109 397.9 339 59.3
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 9.5e-108 394.4 326 61.3
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 1.2e-107 394.0 262 72.1
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 2.1e-107 393.3 284 66.9
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 8.0e-107 391.3 400 51.8
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 4.0e-106 389.0 303 65.0
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 2.0e-105 386.7 340 56.8
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 1.1e-103 380.9 288 64.2
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 1.4e-103 380.6 314 61.5
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 4.1e-103 379.0 296 63.2
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 4.1e-103 379.0 296 63.2
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 4.6e-102 375.6 342 55.8
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 1.5e-100 370.5 306 58.8
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 7.3e-100 368.2 263 66.5
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 5.2e-98 362.1 294 59.9
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 2.0e-97 360.1 225 71.6
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 3.7e-96 355.9 308 58.1
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 3.7e-96 355.9 314 56.1
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 1.1e-95 354.4 328 55.2
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 4.3e-92 342.4 279 63.1
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 1.2e-89 334.3 243 64.6
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 1.9e-87 327.0 307 52.4
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 2.8e-83 313.2 319 50.5
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 3.1e-82 309.7 326 46.0
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 9.0e-82 308.1 297 51.9
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 7.8e-78 295.0 379 49.6
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 2.3e-77 293.5 191 72.3
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 4.5e-73 279.3 184 71.7
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 2.2e-72 276.9 186 69.4
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 3.2e-71 273.1 176 71.6
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.2e-70 271.2 201 68.2
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 1.9e-63 247.3 276 43.1
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 4.8e-59 232.6 232 50.0
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 1.5e-57 227.6 291 45.4
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.1e-54 217.2 190 57.4
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 5.7e-52 209.1 143 69.9
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 3.7e-51 206.5 196 55.1
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 2.0e-49 200.7 283 40.3
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 1.7e-48 197.6 156 59.0
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 1.6e-46 191.0 243 39.1
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 8.2e-43 178.7 354 31.6
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 3.0e-37 160.2 154 48.7
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 1.1e-36 158.3 194 44.8
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 1.5e-36 157.9 192 44.3
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 4.5e-33 146.4 116 59.5
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 6.1e-30 136.0 284 34.2
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 2.4e-26 124.0 150 46.7
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 2.5e-23 114.0 63 79.4
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 5.5e-23 112.8 124 50.0
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 1.4e-21 108.2 271 28.0
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 1.8e-21 107.8 87 64.4
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 1.8e-21 107.8 87 64.4
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 2.8e-19 100.5 181 35.9
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 9.4e-15 85.5 49 79.6
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.2e-14 85.1 113 46.0
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 1.2e-14 85.1 72 55.6
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 2.3e-13 80.9 49 73.5
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 7.0e-10 69.3 62 58.1
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 9.1e-10 68.9 45 62.2
CSS0043726 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 6.1e-06 56.2 26 88.5


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