Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26925 Selenicereus undatus HOM05D006238 ORTHO05D007458 1.4e-71 273.9 272 100.0
Hund02602 Selenicereus undatus HOM05D006238 ORTHO05D007458 4.9e-21 105.9 66 80.3
Atru.chr9.382 Acer truncatum HOM05D006238 ORTHO05D007458 2.7e-19 100.1 67 73.1
Ciclev10021749m.g Citrus clementina HOM05D006238 ORTHO05D007458 3.5e-19 99.8 64 76.6
CANSAT80G2720 Cannabis sativa HOM05D006238 ORTHO05D007458 7.9e-19 98.6 66 74.2
Gohir.A09G243100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 7.9e-19 98.6 66 74.2
Gohir.D09G243800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 7.9e-19 98.6 66 74.2
Gorai.006G267600 Gossypium raimondii HOM05D006238 ORTHO05D007458 7.9e-19 98.6 66 74.2
EL10Ac5g11104 Beta vulgaris HOM05D006238 ORTHO05D007458 1.3e-18 97.8 66 72.7
Potri.015G048800 Populus trichocarpa HOM05D006238 ORTHO05D007458 1.8e-18 97.4 66 74.2
Dinv38791 Davidia involucrata HOM05D006238 ORTHO05D007458 2.3e-18 97.1 66 72.7
MD06G1200000 Malus domestica HOM05D006238 ORTHO05D007458 2.3e-18 97.1 66 72.7
Cfa019307 Carpinus fangiana HOM05D006238 ORTHO05D007458 3.0e-18 96.7 66 72.7
Haze_07689 Corylus avellana HOM05D006238 ORTHO05D007458 3.0e-18 96.7 66 72.7
Migut.L00004 Erythranthe guttata HOM05D006238 ORTHO05D007458 3.0e-18 96.7 66 72.7
MD14G1209200 Malus domestica HOM05D006238 ORTHO05D007458 3.0e-18 96.7 66 72.7
Aqoxy3G00445 Aquilegia oxysepala HOM05D006238 ORTHO05D007458 3.9e-18 96.3 67 70.1
Duzib205G0643 Durio zibethinus HOM05D006238 ORTHO05D007458 3.9e-18 96.3 66 72.7
Nn4g23380 Nelumbo nucifera HOM05D006238 ORTHO05D007458 3.9e-18 96.3 66 72.7
Cpa.g.sc94.12 Carica papaya HOM05D006238 ORTHO05D007458 5.1e-18 95.9 65 70.8
FAN13G1324 Fragaria x ananassa HOM05D000113 ORTHO05D002571 6.7e-18 95.5 64 73.4
Prupe.5G201600 Prunus persica HOM05D006238 ORTHO05D007458 6.7e-18 95.5 64 73.4
PGR044G1626 Punica granatum HOM05D006238 ORTHO05D007458 6.7e-18 95.5 66 71.2
RcHm_v2.0_Chr7g0182671 Rosa chinensis HOM05D006238 ORTHO05D007458 6.7e-18 95.5 64 73.4
Lalb_Chr08g0238951 Lupinus albus HOM05D006238 ORTHO05D007458 8.7e-18 95.1 67 68.7
Eucgr.K02503 Eucalyptus grandis HOM05D006238 ORTHO05D007458 1.1e-17 94.7 66 69.7
FvH4_5g14250 Fragaria vesca HOM05D006238 ORTHO05D007458 1.1e-17 94.7 64 71.9
Glyma.04G164100 Glycine max HOM05D006238 ORTHO05D007458 1.1e-17 94.7 66 72.7
Sed0022301 Sechium edule HOM05D006238 ORTHO05D007458 1.1e-17 94.7 66 69.7
Manes.06G087000 Manihot esculenta HOM05D006238 ORTHO05D007458 1.5e-17 94.4 66 71.2
Medtr3g023830 Medicago truncatula HOM05D006238 ORTHO05D007458 1.5e-17 94.4 66 69.7
TWI81G0503 Tripterygium wilfordii HOM05D006238 ORTHO05D007458 1.5e-17 94.4 66 71.2
ATR0064G078 Amborella trichopoda HOM05D006238 ORTHO05D007458 1.9e-17 94.0 65 69.2
CSS0008812 Camellia sinensis var. sinensis HOM05D006238 ORTHO05D007458 1.9e-17 94.0 66 69.7
Cc04_g15060 Coffea canephora HOM05D006238 ORTHO05D007458 1.9e-17 94.0 66 69.7
FAN08G1023 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.9e-17 94.0 64 71.9
PSO478G4259 Papaver somniferum HOM05D006238 ORTHO05D007458 1.9e-17 94.0 64 71.9
Phvul.009G193701 Phaseolus vulgaris HOM05D006238 ORTHO05D007458 1.9e-17 94.0 66 71.2
Psat5g211960 Pisum sativum HOM05D006238 ORTHO05D007458 1.9e-17 94.0 66 69.7
Thecc.03G097700 Theobroma cacao HOM05D006238 ORTHO05D007458 1.9e-17 94.0 66 69.7
arahy.Tifrunner.gnm1.ann1.G7J9WL Arachis hypogaea HOM05D006238 ORTHO05D007458 2.5e-17 93.6 64 70.3
arahy.Tifrunner.gnm1.ann1.XMW6VU Arachis hypogaea HOM05D006238 ORTHO05D007458 2.5e-17 93.6 64 70.3
MELO3C017212.2 Cucumis melo HOM05D006238 ORTHO05D007458 2.5e-17 93.6 66 68.2
CsaV3_1G002770 Cucumis sativus L. HOM05D006238 ORTHO05D007458 2.5e-17 93.6 66 68.2
Glyma.06G201600 Glycine max HOM05D006238 ORTHO05D007458 2.5e-17 93.6 66 71.2
Lj1g0017158 Lotus japonicus HOM05D006238 ORTHO05D007458 2.5e-17 93.6 66 69.7
Lsat_1_v5_gn_1_13640 Lactuca sativa HOM05D006238 ORTHO05D007458 3.3e-17 93.2 65 69.2
QL10p018767 Quercus lobata HOM05D006238 ORTHO05D007458 3.3e-17 93.2 65 69.2
QL93p0191_0017 Quercus lobata HOM05D006238 ORTHO05D007458 3.3e-17 93.2 65 69.2
TPR.G12219 Trifolium pratense HOM05D006238 ORTHO05D007458 3.3e-17 93.2 66 69.7
Actinidia35026 Actinidia chinensis HOM05D006238 ORTHO05D007458 4.3e-17 92.8 66 69.7
Migut.I00441 Erythranthe guttata HOM05D006238 ORTHO05D007458 4.3e-17 92.8 66 68.2
Lsat_1_v5_gn_4_110280 Lactuca sativa HOM05D006238 ORTHO05D007458 4.3e-17 92.8 67 67.2
Gohir.A12G181100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 5.6e-17 92.4 66 68.2
Gohir.D12G183800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 5.6e-17 92.4 66 68.2
Gorai.008G197100 Gossypium raimondii HOM05D006238 ORTHO05D007458 5.6e-17 92.4 66 68.2
SGA_v2.0_scaffold28G11764 Striga asiatica HOM05D006238 ORTHO05D007458 5.6e-17 92.4 66 68.2
Aa31LG3G18600 Aethionema arabicum HOM05D006238 ORTHO05D007458 7.4e-17 92.0 64 68.8
SalBow5G1318 Salvia bowleyana HOM05D006238 ORTHO05D007458 7.4e-17 92.0 66 68.2
GSVIVG01007912001 Vitis vinifera HOM05D006238 ORTHO05D007458 7.4e-17 92.0 64 70.3
ECA232G0231 Erigeron canadensis HOM05D000954 ORTHO05D000822 9.6e-17 91.7 67 67.2
MSTRG.22972 Avicennia marina HOM05D006238 ORTHO05D007458 1.3e-16 91.3 66 68.2
CiPaw.11G050500 Carya illinoinensis HOM05D006238 ORTHO05D007458 1.3e-16 91.3 66 68.2
DCAR_016594 Daucus carota HOM05D006238 ORTHO05D007458 1.3e-16 91.3 66 68.2
PSO339G0502 Papaver somniferum HOM05D006238 ORTHO05D007458 1.3e-16 91.3 66 68.2
PSO384G2798 Papaver somniferum HOM05D006238 ORTHO05D007458 1.3e-16 91.3 66 68.2
Ca_13804_v3 Cicer arietinum L. HOM05D006238 ORTHO05D007458 1.6e-16 90.9 66 66.7
HanXRQChr02g0042551 Helianthus annuus HOM05D006238 ORTHO05D007458 1.6e-16 90.9 67 67.2
HanXRQChr14g0439161 Helianthus annuus HOM05D006238 ORTHO05D007458 1.6e-16 90.9 67 67.2
Nitab4.5_0001410g0100 Nicotiana tabacum HOM05D006238 ORTHO05D007458 1.6e-16 90.9 69 63.8
Nitab4.5_0004284g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 2.1e-16 90.5 66 66.7
Oeu038367.1 Olea europaea HOM05D006238 ORTHO05D007458 2.1e-16 90.5 66 66.7
QL05p088277 Quercus lobata HOM05D003602 ORTHO05D007458 2.1e-16 90.5 65 67.7
ClCG06G015770 Citrullus lanatus HOM05D006238 ORTHO05D007458 2.8e-16 90.1 66 66.7
PSO017G1619 Papaver somniferum HOM05D006238 ORTHO05D007458 3.6e-16 89.7 64 67.2
BcaB01g05687 Brassica carinata HOM05D006238 ORTHO05D007458 6.2e-16 89.0 64 65.6
BcaB01g05688 Brassica carinata HOM05D006238 ORTHO05D007458 6.2e-16 89.0 64 65.6
Nitab4.5_0001961g0050 Nicotiana tabacum HOM05D006238 ORTHO05D007458 6.2e-16 89.0 65 64.6
Nitab4.5_0005160g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 6.2e-16 89.0 65 64.6
ECA247G0665 Erigeron canadensis HOM05D000006 ORTHO05D007458 8.1e-16 88.6 66 65.2
Thhalv10014418m.g Eutrema salsugineum HOM05D006238 ORTHO05D007458 1.1e-15 88.2 64 65.6
PGSC0003DMG400005395 Solanum tuberosum HOM05D006238 ORTHO05D007458 1.1e-15 88.2 66 63.6
THA.LOC104801299 Tarenaya hassleriana HOM05D006238 ORTHO05D007458 1.4e-15 87.8 64 67.2
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 1.4e-15 87.8 66 66.7
HPP92_027112 Vanilla planifolia HOM05D006238 ORTHO05D007458 1.4e-15 87.8 66 66.7
Solyc03g115410.3 Solanum lycopersicum HOM05D006238 ORTHO05D007458 1.8e-15 87.4 66 63.6
BcaB05g21597 Brassica carinata HOM05D006238 ORTHO05D007458 2.4e-15 87.0 64 64.1
BcaNung04721 Brassica carinata HOM05D006238 ORTHO05D007458 2.4e-15 87.0 64 64.1
C02p03310 Brassica napus HOM05D006238 ORTHO05D007458 2.4e-15 87.0 64 64.1
BolC2t06295H Brassica oleracea HOM05D006238 ORTHO05D007458 2.4e-15 87.0 64 64.1
BraA02t04934Z Brassica rapa HOM05D006238 ORTHO05D007458 2.4e-15 87.0 64 64.1
Sp6g35050 Schrenkiella parvula HOM05D006238 ORTHO05D007458 2.4e-15 87.0 64 64.1
A03p03520 Brassica napus HOM05D006238 ORTHO05D007458 3.1e-15 86.7 64 62.5
BraA03t09702Z Brassica rapa HOM05D006238 ORTHO05D007458 3.1e-15 86.7 64 62.5
COL.COLO4_22216 Corchorus olitorius HOM05D006238 ORTHO05D007458 3.1e-15 86.7 66 66.7
BcaB01g05644 Brassica carinata HOM05D006238 ORTHO05D007458 4.0e-15 86.3 64 64.1
C03p03970 Brassica napus HOM05D006238 ORTHO05D007458 4.0e-15 86.3 64 64.1
BolC3t12934H Brassica oleracea HOM05D006238 ORTHO05D007458 4.0e-15 86.3 64 64.1
Peaxi162Scf00106g00109 Petunia axillaris HOM05D006238 ORTHO05D007458 5.3e-15 85.9 66 63.6
PGSC0003DMG401024548 Solanum tuberosum HOM05D006238 ORTHO05D007458 5.3e-15 85.9 66 62.1
Sopen03g034410 Solanum pennellii HOM05D006238 ORTHO05D007458 9.0e-15 85.1 66 62.1
Carub.0006s0680 Capsella rubella HOM05D006238 ORTHO05D007458 1.2e-14 84.7 64 65.6
Sopen12g019730 Solanum pennellii HOM05D006238 ORTHO05D007458 1.2e-14 84.7 66 60.6
CAN.G479.27 Capsicum annuum HOM05D006238 ORTHO05D007458 2.0e-14 84.0 66 60.6
CARHR205290 Cardamine hirsuta HOM05D006238 ORTHO05D007458 2.0e-14 84.0 64 64.1
Solyc12g040320.2 Solanum lycopersicum HOM05D006238 ORTHO05D007458 2.0e-14 84.0 66 59.1
AL6G18240 Arabidopsis lyrata HOM05D006238 ORTHO05D007458 2.6e-14 83.6 64 64.1
AT5G07910 Arabidopsis thaliana HOM05D006238 ORTHO05D007458 4.5e-14 82.8 64 62.5
BcaNung04724 Brassica carinata HOM05D006238 ORTHO05D007458 4.5e-14 82.8 64 62.5
Zm00001eb008470 Zea mays HOM05D006238 ORTHO05D007458 2.2e-13 80.5 56 71.4
SMO364G0258 Selaginella moellendorffii HOM05D006238 ORTHO05D007458 2.4e-12 77.0 64 54.7
AagrBONN_evm.TU.Sc2ySwM_228.2402 Anthoceros agrestis HOM05D006238 ORTHO05D007458 3.2e-12 76.6 65 53.8
Pp3c19_5770 Physcomitrium patens HOM05D006238 ORTHO05D007458 3.5e-11 73.2 65 55.4
Dinv10691 Davidia involucrata HOM05D000773 ORTHO05D000588 9.6e-09 65.1 44 70.5
CBR_g18689 Chara braunii HOM05D006238 ORTHO05D007458 4.8e-08 62.8 63 46.0
Sc10g0009770 Simmondsia chinensis HOM05D006238 ORTHO05D007458 9.0e-07 58.5 28 92.9
Rhsim12G0152200 Rhododendron simsii HOM05D006238 ORTHO05D007458 2.6e-06 57.0 37 70.3
vmacro16511 Vaccinium macrocarpon HOM05D006238 ORTHO05D007458 2.6e-06 57.0 37 70.3
Mapoly0043s0125 Marchantia polymorpha HOM05D006395 ORTHO05D007894 7.6e-06 55.5 64 39.1
SMO198G0061 Selaginella moellendorffii HOM05D006395 ORTHO05D007894 7.6e-06 55.5 65 41.5


User provided reference genes

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