Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 3.1e-156 555.1 274 100.0
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 2.3e-34 150.2 94 79.8
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 1.1e-33 147.9 81 86.4
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 1.5e-33 147.5 92 72.8
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 2.5e-33 146.7 94 75.5
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 3.3e-33 146.4 92 73.9
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 4.3e-33 146.0 92 72.8
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 7.4e-33 145.2 91 73.6
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 9.6e-33 144.8 91 74.7
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 1.3e-32 144.4 91 75.8
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 3.7e-32 142.9 91 74.7
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 4.8e-32 142.5 91 74.7
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.4e-31 141.0 91 71.4
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.4e-31 141.0 91 71.4
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.4e-31 141.0 95 74.7
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.8e-31 140.6 91 73.6
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.8e-31 140.6 91 71.4
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 2.4e-31 140.2 90 74.4
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 2.4e-31 140.2 93 71.0
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.1e-31 139.8 91 71.4
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.1e-31 139.8 91 71.4
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 6.9e-31 138.7 92 70.7
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 6.9e-31 138.7 93 69.9
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 6.9e-31 138.7 90 74.4
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 6.9e-31 138.7 92 75.0
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 9.0e-31 138.3 97 68.0
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 9.0e-31 138.3 93 67.7
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 9.0e-31 138.3 93 67.7
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 1.2e-30 137.9 92 68.5
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 1.5e-30 137.5 92 70.7
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 1.5e-30 137.5 92 68.5
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 2.0e-30 137.1 91 72.5
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 2.0e-30 137.1 94 69.1
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.0e-30 137.1 91 70.3
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 2.0e-30 137.1 91 70.3
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.0e-30 137.1 91 69.2
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 2.6e-30 136.7 97 70.1
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 2.6e-30 136.7 92 67.4
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 2.6e-30 136.7 92 69.6
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 3.4e-30 136.3 93 67.7
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 3.4e-30 136.3 92 69.6
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 3.4e-30 136.3 91 70.3
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 4.5e-30 136.0 93 67.7
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 4.5e-30 136.0 92 68.5
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 4.5e-30 136.0 94 70.2
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 4.5e-30 136.0 94 70.2
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 4.5e-30 136.0 93 69.9
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 5.8e-30 135.6 93 68.8
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 5.8e-30 135.6 93 68.8
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.8e-30 135.6 94 69.1
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.8e-30 135.6 94 69.1
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.8e-30 135.6 94 69.1
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 5.8e-30 135.6 92 67.4
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 5.8e-30 135.6 91 70.3
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 7.6e-30 135.2 92 69.6
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 7.6e-30 135.2 92 70.7
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 7.6e-30 135.2 96 69.8
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.6e-30 135.2 91 68.1
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 1.0e-29 134.8 92 67.4
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 1.0e-29 134.8 91 71.4
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 1.3e-29 134.4 92 67.4
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.3e-29 134.4 92 66.3
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.3e-29 134.4 94 66.0
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.3e-29 134.4 91 68.1
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 1.7e-29 134.0 91 68.1
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.7e-29 134.0 95 66.3
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 2.2e-29 133.7 92 68.5
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 2.2e-29 133.7 93 66.7
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.2e-29 133.7 92 66.3
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 2.9e-29 133.3 92 67.4
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.9e-29 133.3 91 67.0
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 2.9e-29 133.3 95 68.4
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.9e-29 133.3 91 65.9
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 3.8e-29 132.9 92 66.3
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 3.8e-29 132.9 93 67.7
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 4.9e-29 132.5 92 66.3
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 4.9e-29 132.5 87 70.1
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 4.9e-29 132.5 91 67.0
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 4.9e-29 132.5 93 63.4
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 4.9e-29 132.5 92 66.3
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 4.9e-29 132.5 93 64.5
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 6.5e-29 132.1 91 67.0
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 6.5e-29 132.1 93 68.8
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 8.4e-29 131.7 93 65.6
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 8.4e-29 131.7 79 75.9
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 1.1e-28 131.3 93 66.7
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 1.1e-28 131.3 93 66.7
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.1e-28 131.3 93 65.6
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.1e-28 131.3 91 68.1
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.1e-28 131.3 93 66.7
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 1.4e-28 131.0 91 65.9
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 1.4e-28 131.0 91 65.9
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.4e-28 131.0 93 66.7
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 1.4e-28 131.0 93 66.7
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 1.9e-28 130.6 93 66.7
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.9e-28 130.6 91 67.0
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 2.5e-28 130.2 93 65.6
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 2.5e-28 130.2 93 63.4
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 3.2e-28 129.8 94 70.2
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 4.2e-28 129.4 92 65.2
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 5.5e-28 129.0 91 65.9
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 7.1e-28 128.6 94 66.0
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 7.1e-28 128.6 93 64.5
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 7.1e-28 128.6 108 58.3
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 9.3e-28 128.3 79 73.4
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 1.2e-27 127.9 93 65.6
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 2.7e-27 126.7 91 69.2
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 3.5e-27 126.3 92 63.0
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 3.5e-27 126.3 91 64.8
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.5e-27 126.3 90 64.4
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 4.6e-27 125.9 92 59.8
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 4.6e-27 125.9 93 63.4
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 4.6e-27 125.9 93 64.5
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 6.0e-27 125.6 92 63.0
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 6.0e-27 125.6 91 64.8
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 7.9e-27 125.2 91 62.6
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.0e-26 124.8 91 61.5
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 1.0e-26 124.8 92 65.2
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.3e-26 124.4 91 62.6
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 1.3e-26 124.4 92 65.2
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 1.8e-26 124.0 91 64.8
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.8e-26 124.0 92 62.0
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 3.0e-26 123.2 88 65.9
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 3.0e-26 123.2 98 64.3
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 3.9e-26 122.9 92 60.9
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 3.9e-26 122.9 92 64.1
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 3.9e-26 122.9 93 64.5
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 6.7e-26 122.1 93 61.3
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 6.7e-26 122.1 92 63.0
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 6.7e-26 122.1 94 61.7
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 6.7e-26 122.1 94 61.7
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 8.7e-26 121.7 93 63.4
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 8.7e-26 121.7 90 63.3
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.9e-25 120.6 92 63.0
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 1.9e-25 120.6 90 62.2
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 3.3e-25 119.8 92 63.0
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 3.3e-25 119.8 92 63.0
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 1.6e-24 117.5 92 58.7
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 2.8e-24 116.7 81 71.6
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 3.7e-24 116.3 81 67.9
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 8.2e-24 115.2 90 57.8
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.1e-23 114.8 91 57.1
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.4e-23 113.6 79 63.3
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 4.1e-23 112.8 91 58.2
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 2.0e-22 110.5 91 59.3
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 2.6e-22 110.2 92 54.3
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.6e-22 110.2 90 56.7
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 2.6e-22 110.2 93 59.1
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 3.4e-22 109.8 100 57.0
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 4.5e-22 109.4 83 66.3
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 7.6e-22 108.6 81 65.4
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 1.3e-21 107.8 93 57.0
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.1e-20 104.8 94 56.4
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 2.5e-20 103.6 74 60.8
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 3.2e-20 103.2 78 64.1
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 4.2e-20 102.8 80 60.0
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 4.6e-19 99.4 79 58.2
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 5.1e-18 95.9 94 51.1
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 1.5e-17 94.4 73 60.3
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 2.8e-16 90.1 64 68.8
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 1.4e-15 87.8 72 59.7
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 3.1e-15 86.7 61 67.2
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 5.3e-15 85.9 59 64.4
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 3.8e-13 79.7 96 42.7
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 1.4e-12 77.8 98 39.8
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.5e-12 77.0 84 44.0
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 9.4e-12 75.1 51 68.6
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 9.4e-12 75.1 51 68.6
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 2.7e-11 73.6 40 77.5
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 3.0e-10 70.1 71 43.7
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 6.3e-08 62.4 69 42.0
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.4e-07 61.2 69 37.7
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 3.1e-07 60.1 69 40.6


User provided reference genes

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