Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25276 Selenicereus undatus HOM05D005453 ORTHO05D006520 0.0e+00 1098.6 570 100.0
Hund05918 Selenicereus undatus HOM05D005453 ORTHO05D006520 4.8e-135 485.7 611 51.2
AUR62026459 Chenopodium quinoa HOM05D005453 ORTHO05D006520 1.4e-123 447.6 591 50.8
AUR62026269 Chenopodium quinoa HOM05D005453 ORTHO05D006520 2.7e-122 443.4 610 49.2
EL10Ac6g13139 Beta vulgaris HOM05D005453 ORTHO05D006520 3.3e-120 436.4 623 47.0
Sc11g0001640 Simmondsia chinensis HOM05D005453 ORTHO05D006520 2.0e-101 374.0 593 43.0
Haze_12074 Corylus avellana HOM05D005453 ORTHO05D006520 7.0e-94 349.0 544 43.4
Cfa009044 Carpinus fangiana HOM05D005453 ORTHO05D006520 1.6e-93 347.8 628 40.4
QL03p065960 Quercus lobata HOM05D005453 ORTHO05D006520 6.5e-92 342.4 553 43.2
Prupe.1G266900 Prunus persica HOM05D005453 ORTHO05D006520 9.8e-88 328.6 616 41.1
Ciclev10031079m.g Citrus clementina HOM05D005453 ORTHO05D006520 6.3e-87 325.9 623 38.5
Manes.01G191800 Manihot esculenta HOM05D005453 ORTHO05D006520 1.8e-86 324.3 548 41.4
PGR102G2554 Punica granatum HOM05D005453 ORTHO05D006520 3.1e-86 323.6 544 41.4
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 1.0e-84 318.5 532 42.9
Actinidia19854 Actinidia chinensis HOM05D005453 ORTHO05D006520 6.6e-84 315.8 633 39.5
CiPaw.05G140600 Carya illinoinensis HOM05D005453 ORTHO05D006520 1.9e-83 314.3 517 42.6
MD13G1079900 Malus domestica HOM05D005453 ORTHO05D006520 2.8e-82 310.5 541 41.6
COL.COLO4_36184 Corchorus olitorius HOM05D005453 ORTHO05D006520 2.3e-81 307.4 533 40.9
Gorai.005G189700 Gossypium raimondii HOM05D005453 ORTHO05D006520 7.5e-80 302.4 539 39.1
Potri.010G034600 Populus trichocarpa HOM05D005453 ORTHO05D006520 2.2e-79 300.8 551 39.9
COL.COLO4_34957 Corchorus olitorius HOM05D005453 ORTHO05D006520 4.9e-79 299.7 541 39.7
Duzib268G1123 Durio zibethinus HOM05D005453 ORTHO05D006520 6.4e-79 299.3 537 39.9
MSTRG.666 Avicennia marina HOM05D005453 ORTHO05D006520 1.1e-78 298.5 542 39.7
vmacro16321 Vaccinium macrocarpon HOM05D005453 ORTHO05D006520 1.1e-78 298.5 511 41.5
Nitab4.5_0000679g0110 Nicotiana tabacum HOM05D005453 ORTHO05D006520 5.4e-78 296.2 534 40.3
Thecc.02G232200 Theobroma cacao HOM05D005453 ORTHO05D006520 7.0e-78 295.8 535 40.7
Gohir.D02G169300 Gossypium hirsutum HOM05D005453 ORTHO05D006520 9.2e-78 295.4 540 39.1
Dinv34193 Davidia involucrata HOM05D005453 ORTHO05D006520 1.6e-77 294.7 575 39.5
ClCG05G024670 Citrullus lanatus HOM05D005453 ORTHO05D006520 2.0e-77 294.3 542 40.0
Peaxi162Scf00209g00610 Petunia axillaris HOM05D005453 ORTHO05D006520 7.8e-77 292.4 606 37.0
Nitab4.5_0002291g0010 Nicotiana tabacum HOM05D005453 ORTHO05D006520 3.9e-76 290.0 609 35.8
CANSAT64G2233 Cannabis sativa HOM05D005453 ORTHO05D006520 5.0e-76 289.7 547 39.1
FAN22G2419 Fragaria x ananassa HOM05D005453 ORTHO05D006520 5.0e-76 289.7 569 39.0
RcHm_v2.0_Chr4g0440791 Rosa chinensis HOM05D005453 ORTHO05D006520 5.0e-76 289.7 549 39.5
Nitab4.5_0002382g0040 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.1e-75 288.5 610 36.4
Potri.008G194300 Populus trichocarpa HOM05D005453 ORTHO05D006520 1.9e-75 287.7 544 39.5
Rhsim12G0129300 Rhododendron simsii HOM05D005453 ORTHO05D006520 1.9e-75 287.7 537 40.2
PGSC0003DMG400017617 Solanum tuberosum HOM05D005453 ORTHO05D006520 5.6e-75 286.2 535 38.5
Eucgr.B03405 Eucalyptus grandis HOM05D005453 ORTHO05D006520 9.5e-75 285.4 512 39.5
Nitab4.5_0002969g0050 Nicotiana tabacum HOM05D005453 ORTHO05D006520 2.8e-74 283.9 545 39.6
Hma1.2p1_0265F.1_g106550 Hydrangea macrophylla HOM05D005453 ORTHO05D006520 3.6e-74 283.5 552 39.7
MELO3C012058.2 Cucumis melo HOM05D005453 ORTHO05D006520 6.2e-74 282.7 528 37.5
TPR.G29465 Trifolium pratense HOM05D005453 ORTHO05D006520 8.0e-74 282.3 547 37.3
Solyc05g006930.3 Solanum lycopersicum HOM05D005453 ORTHO05D006520 3.1e-73 280.4 540 39.6
Sopen05g002890 Solanum pennellii HOM05D005453 ORTHO05D006520 8.9e-73 278.9 539 39.9
CAN.G27.11 Capsicum annuum HOM05D005453 ORTHO05D006520 1.2e-72 278.5 545 39.1
Glyma.02G022500 Glycine max HOM05D005453 ORTHO05D006520 1.5e-72 278.1 545 36.7
Medtr5g038210 Medicago truncatula HOM05D005453 ORTHO05D006520 1.5e-72 278.1 547 36.9
FvH4_4g32100 Fragaria vesca HOM05D005453 ORTHO05D006520 2.6e-72 277.3 547 38.0
Sabra10G0030200 Salix brachista HOM05D005453 ORTHO05D006520 3.4e-72 276.9 576 36.1
FAN12G1353 Fragaria x ananassa HOM05D005453 ORTHO05D006520 1.3e-71 275.0 550 38.0
CsaV3_5G032260 Cucumis sativus L. HOM05D005453 ORTHO05D006520 1.7e-71 274.6 537 38.5
TWI75G0114 Tripterygium wilfordii HOM05D005453 ORTHO05D006520 3.7e-71 273.5 554 36.6
Nn3g17115 Nelumbo nucifera HOM05D005453 ORTHO05D006520 1.4e-70 271.6 555 37.8
DCAR_031056 Daucus carota HOM05D005453 ORTHO05D006520 4.1e-70 270.0 546 36.8
AT1G27070 Arabidopsis thaliana HOM05D005453 ORTHO05D006520 1.2e-69 268.5 552 37.5
THA.LOC104822093 Tarenaya hassleriana HOM05D005453 ORTHO05D006520 2.7e-69 267.3 575 37.9
CAN.G827.6 Capsicum annuum HOM05D005453 ORTHO05D006520 3.5e-69 266.9 539 38.0
MD16G1079800 Malus domestica HOM05D005453 ORTHO05D006520 6.0e-69 266.2 483 41.0
Nn4g23024 Nelumbo nucifera HOM05D005453 ORTHO05D006520 6.0e-69 266.2 617 36.3
CSS0029199 Camellia sinensis var. sinensis HOM05D005453 ORTHO05D006520 7.8e-69 265.8 623 35.5
Sopen01g006070 Solanum pennellii HOM05D005453 ORTHO05D006520 7.8e-69 265.8 538 37.2
Aqoxy3G03253 Aquilegia oxysepala HOM05D005453 ORTHO05D006520 1.3e-68 265.0 560 38.0
Peaxi162Scf00026g02226 Petunia axillaris HOM05D005453 ORTHO05D006520 1.7e-68 264.6 562 37.5
MBI05_g12576_MAGBIO Magnolia biondii HOM05D005453 ORTHO05D006520 2.3e-68 264.2 545 35.2
Glyma.01G041500 Glycine max HOM05D005453 ORTHO05D006520 3.9e-68 263.5 549 35.5
PGSC0003DMG400026781 Solanum tuberosum HOM05D005453 ORTHO05D006520 5.0e-68 263.1 529 37.8
SGA_v2.0_scaffold163G38065 Striga asiatica HOM05D005453 ORTHO05D006520 5.0e-68 263.1 535 37.0
Lalb_Chr10g0097931 Lupinus albus HOM05D005453 ORTHO05D006520 6.6e-68 262.7 557 35.9
Oeu011701.1 Olea europaea HOM05D005453 ORTHO05D006520 1.5e-67 261.5 549 36.2
Sp1g21710 Schrenkiella parvula HOM05D005453 ORTHO05D006520 2.5e-67 260.8 554 38.6
VMungo1215G2350 Vigna mungo HOM05D005453 ORTHO05D006520 3.3e-67 260.4 551 36.3
Carub.0001s2390 Capsella rubella HOM05D005453 ORTHO05D006520 7.3e-67 259.2 532 39.7
BcaB07g32384 Brassica carinata HOM05D005453 ORTHO05D006520 9.5e-67 258.8 544 37.5
Sabra08G0147800 Salix brachista HOM05D005453 ORTHO05D006520 1.6e-66 258.1 632 34.3
Oeu057176.2 Olea europaea HOM05D005453 ORTHO05D006520 6.2e-66 256.1 482 39.0
Phvul.002G067500 Phaseolus vulgaris HOM05D005453 ORTHO05D006520 2.3e-65 254.2 544 35.1
Ca_07371_v3 Cicer arietinum L. HOM05D005453 ORTHO05D006520 1.5e-64 251.5 577 35.0
Thhalv10007340m.g Eutrema salsugineum HOM05D005453 ORTHO05D006520 1.5e-64 251.5 549 37.2
Gohir.A03G146000 Gossypium hirsutum HOM05D005453 ORTHO05D006520 3.4e-64 250.4 489 37.0
arahy.Tifrunner.gnm1.ann1.7H81I7 Arachis hypogaea HOM05D005453 ORTHO05D006520 9.9e-64 248.8 606 35.5
A09p40480 Brassica napus HOM05D003373 ORTHO05D004419 3.7e-63 246.9 535 36.1
BraA09t39545Z Brassica rapa HOM05D003373 ORTHO05D006520 3.7e-63 246.9 535 36.1
GSVIVG01020082001 Vitis vinifera HOM05D005453 ORTHO05D006520 1.9e-62 244.6 460 38.9
C05p23700 Brassica napus HOM05D003373 ORTHO05D004419 7.1e-62 242.7 539 35.8
BolC5t31089H Brassica oleracea HOM05D005453 ORTHO05D006520 7.1e-62 242.7 543 35.7
Aa31LG7G8080 Aethionema arabicum HOM05D005453 ORTHO05D006520 9.2e-62 242.3 511 37.6
PSO017G4002 Papaver somniferum HOM05D005453 ORTHO05D006520 9.2e-62 242.3 524 36.3
arahy.Tifrunner.gnm1.ann1.62035P Arachis hypogaea HOM05D005453 ORTHO05D006520 2.7e-61 240.7 608 35.0
Cc11_g13580 Coffea canephora HOM05D005453 ORTHO05D006520 6.0e-61 239.6 407 40.5
Lj2g0004726 Lotus japonicus HOM05D005453 ORTHO05D006520 1.3e-60 238.4 600 33.0
PSO478G0523 Papaver somniferum HOM05D005453 ORTHO05D006520 8.6e-60 235.7 524 36.1
arahy.Tifrunner.gnm1.ann1.C864RN Arachis hypogaea HOM05D005453 ORTHO05D006520 1.9e-59 234.6 615 34.0
Sed0006777 Sechium edule HOM05D005453 ORTHO05D006520 9.5e-59 232.3 557 33.6
Migut.L01350 Erythranthe guttata HOM05D005453 ORTHO05D006520 3.6e-58 230.3 642 33.2
Duzib248G1267 Durio zibethinus HOM05D005453 ORTHO05D006520 8.1e-58 229.2 487 36.3
ECA234G1124 Erigeron canadensis HOM05D005453 ORTHO05D006520 2.4e-57 227.6 559 34.3
Sed0004157 Sechium edule HOM05D005453 ORTHO05D006520 4.0e-57 226.9 480 36.5
Lsat_1_v5_gn_8_53620 Lactuca sativa HOM05D005453 ORTHO05D006520 8.9e-57 225.7 535 33.3
SalBow2G2835 Salvia bowleyana HOM05D005453 ORTHO05D006520 1.1e-54 218.8 535 32.7
TAR374G0997 Trochodendron aralioides HOM05D005453 ORTHO05D006520 1.4e-54 218.4 607 32.8
Psat2g125480 Pisum sativum HOM05D005453 ORTHO05D006520 8.6e-52 209.1 394 39.8
Atru.chr11.1866 Acer truncatum HOM05D005453 ORTHO05D006520 1.1e-49 202.2 354 39.5
Os03g0686900 Oryza sativa ssp. japonica HOM05D005453 ORTHO05D006520 5.8e-48 196.4 542 32.8
TAR622G1188 Trochodendron aralioides HOM05D005453 ORTHO05D006520 5.8e-48 196.4 487 36.6
HanXRQChr08g0209161 Helianthus annuus HOM05D005453 ORTHO05D006520 1.3e-47 195.3 513 30.0
BcaC05g26346 Brassica carinata HOM05D005453 ORTHO05D006520 2.2e-47 194.5 421 36.6
unitig_22.g6530 Utricularia gibba HOM05D005453 ORTHO05D006520 4.9e-47 193.4 513 33.5
AL1G38420 Arabidopsis lyrata HOM05D005453 ORTHO05D006520 6.4e-47 193.0 550 31.6
CARHR024830 Cardamine hirsuta HOM05D005453 ORTHO05D006520 2.1e-45 188.0 311 40.8
ATR0665G247 Amborella trichopoda HOM05D005453 ORTHO05D006520 7.3e-43 179.5 562 31.1
Zm00001eb217200 Zea mays HOM05D005453 ORTHO05D006520 4.0e-41 173.7 546 30.0
MSTRG.7832 Avicennia marina HOM05D005453 ORTHO05D006520 5.3e-41 173.3 242 45.5
Sc04g0008480 Simmondsia chinensis HOM05D005453 ORTHO05D006520 5.3e-41 173.3 482 31.5
Actinidia08209 Actinidia chinensis HOM05D005453 ORTHO05D006520 3.8e-39 167.2 417 34.8
CDE06G1042 Ceratophyllum demersum HOM05D005453 ORTHO05D006520 4.9e-39 166.8 528 30.1
Solyc01g010460.4 Solanum lycopersicum HOM05D005453 ORTHO05D006520 6.9e-33 146.4 384 32.3
Zm00001eb053230 Zea mays HOM05D005453 ORTHO05D006520 3.8e-31 140.6 468 28.8
FAN07G1475 Fragaria x ananassa HOM05D005453 ORTHO05D006520 4.9e-31 140.2 369 33.9
Atru.chr11.1865 Acer truncatum HOM05D005453 ORTHO05D006520 7.4e-27 126.3 188 41.0
SEGI_23512 Sequoiadendron giganteum HOM05D005453 ORTHO05D006520 2.8e-26 124.4 563 27.2
Cpa.g.c42295 Carica papaya HOM05D005453 ORTHO05D006520 3.7e-26 124.0 158 47.5
AUR62041893 Chenopodium quinoa HOM05D008659 ORTHO05D010848 2.4e-25 121.3 169 47.9
HPP92_018829 Vanilla planifolia HOM05D005453 ORTHO05D006520 2.4e-25 121.3 533 25.7
Solyc01g010470.2 Solanum lycopersicum HOM05D005453 ORTHO05D006520 5.3e-25 120.2 193 43.0
Oeu026503.1 Olea europaea HOM05D005453 ORTHO05D006520 1.7e-23 115.2 254 35.0
FAN07G0689 Fragaria x ananassa HOM05D005453 ORTHO05D006520 2.8e-18 97.8 212 36.8
SMO353G0350 Selaginella moellendorffii HOM05D005453 ORTHO05D006520 2.4e-17 94.7 108 41.7
Mapoly0020s0141 Marchantia polymorpha HOM05D005453 ORTHO05D006520 4.5e-16 90.5 203 31.5
HanXRQChr03g0092811 Helianthus annuus HOM05D005453 ORTHO05D006520 3.2e-14 84.3 91 48.4
Cpa.g.sc1308.1 Carica papaya HOM05D005453 ORTHO05D006520 3.6e-13 80.9 167 33.5
CBR_g23347 Chara braunii HOM05D005453 ORTHO05D006520 3.6e-13 80.9 251 25.9
TPR.G23943 Trifolium pratense HOM05D005453 ORTHO05D006520 3.6e-13 80.9 49 69.4
AagrBONN_evm.TU.Sc2ySwM_117.2704 Anthoceros agrestis HOM05D005453 ORTHO05D006520 8.8e-12 76.3 107 37.4
Cpa.g.c46071 Carica papaya HOM05D005453 ORTHO05D006520 8.8e-12 76.3 98 44.9
HanXRQChr03g0092801 Helianthus annuus HOM05D005453 ORTHO05D006520 9.7e-11 72.8 59 54.2
vmacro21820 Vaccinium macrocarpon HOM05D005453 ORTHO05D006520 1.2e-08 65.9 140 39.3
CDE06G1945 Ceratophyllum demersum HOM05D005453 ORTHO05D006520 1.7e-07 62.0 243 30.5
Actinidia08210 Actinidia chinensis HOM05D005453 ORTHO05D006520 3.8e-07 60.8 68 47.1
Oeu001597.1 Olea europaea HOM05D005453 ORTHO05D006520 5.0e-07 60.5 33 72.7
QL02p057713 Quercus lobata HOM05D006597 ORTHO05D008141 9.4e-06 56.2 215 26.0


User provided reference genes

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