Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 0.0e+00 2350.9 1453 100.0
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 0.0e+00 1298.5 1415 59.8
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 0.0e+00 1256.9 1426 57.8
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 0.0e+00 1171.4 1420 56.5
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 3.1e-303 1045.8 1435 52.8
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 4.6e-299 1031.9 1432 50.4
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 4.4e-286 988.8 1425 50.8
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 6.4e-285 984.9 1497 48.8
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 1.1e-284 984.2 1422 51.2
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 1.9e-284 983.4 1451 50.4
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 4.6e-283 978.8 1433 47.0
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 1.3e-282 977.2 1447 50.4
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 5.6e-281 971.8 1440 49.4
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.3e-277 960.7 1491 48.7
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 1.4e-276 957.2 1252 54.3
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 1.9e-276 956.8 1463 48.9
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 2.1e-275 953.4 1489 49.3
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 4.6e-275 952.2 1534 48.2
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 1.3e-274 950.7 1382 49.9
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.1e-273 947.6 1492 48.8
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 3.6e-272 942.6 1521 48.0
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 2.0e-270 936.8 1432 48.8
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 9.9e-270 934.5 1470 46.7
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 9.9e-270 934.5 1433 48.8
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.1e-268 931.0 1451 51.2
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 1.3e-266 924.1 1445 50.7
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 3.3e-265 919.5 1441 48.0
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 1.6e-264 917.1 1447 50.7
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 3.1e-263 912.9 1463 47.7
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 9.0e-263 911.4 1276 49.0
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 1.2e-262 911.0 1392 48.1
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 1.3e-261 907.5 1445 45.5
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 2.2e-261 906.7 1445 46.9
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 1.9e-260 903.7 1451 46.9
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 7.1e-260 901.7 1441 46.2
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.1e-259 900.2 1448 46.8
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 2.7e-259 899.8 1481 48.1
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 1.3e-258 897.5 1470 45.8
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 1.3e-258 897.5 1492 47.2
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 1.5e-257 894.0 1465 47.7
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.5e-257 894.0 1447 46.4
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 7.4e-257 891.7 1451 48.7
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 1.1e-252 877.9 1394 46.7
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 1.4e-252 877.5 1525 46.0
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.9e-252 877.1 1473 46.1
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 7.2e-252 875.2 1419 49.1
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 9.3e-252 874.8 1449 46.7
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 1.6e-251 874.0 1405 49.1
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 1.0e-250 871.3 1456 46.3
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 6.7e-250 868.6 1493 48.6
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 5.7e-249 865.5 1518 47.4
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 3.7e-248 862.8 1477 50.2
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 3.4e-246 856.3 1439 45.4
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 2.2e-245 853.6 1489 43.8
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 5.0e-245 852.4 1459 46.8
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 1.0e-242 844.7 1483 44.7
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 6.7e-242 842.0 1471 46.0
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 9.7e-241 838.2 1506 44.0
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 1.3e-237 827.8 1284 49.3
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 1.4e-236 824.3 1450 47.8
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 1.6e-230 804.3 1333 45.1
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 7.7e-230 802.0 1439 43.4
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 3.8e-229 799.7 1533 44.0
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 6.5e-229 798.9 1451 45.6
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 5.9e-222 775.8 1451 48.5
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 7.7e-222 775.4 1434 48.5
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 2.9e-221 773.5 1509 42.1
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 1.2e-219 768.1 1660 41.0
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 2.8e-216 756.9 1464 44.3
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 1.8e-215 754.2 1430 44.0
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 6.5e-213 745.7 1458 45.5
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 4.7e-211 739.6 1454 44.2
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 6.1e-211 739.2 1537 42.6
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 2.3e-210 737.3 705 62.3
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 2.3e-210 737.3 1459 45.1
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 6.3e-208 729.2 1235 45.1
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 6.6e-205 719.2 1472 45.2
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 1.5e-204 718.0 1480 40.4
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 7.3e-204 715.7 1460 44.5
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 3.7e-200 703.4 1460 44.5
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 3.5e-198 696.8 1489 42.6
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 5.8e-193 679.5 1423 44.8
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 2.4e-191 674.1 1426 44.5
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 7.8e-190 669.1 1415 44.6
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 7.8e-190 669.1 1415 44.6
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 2.3e-189 667.5 1426 41.2
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 2.5e-188 664.1 1427 44.6
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 3.3e-188 663.7 1426 44.2
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 9.5e-188 662.1 1396 42.4
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 2.8e-187 660.6 1230 43.4
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 2.3e-186 657.5 1389 45.2
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 2.0e-185 654.4 1471 42.0
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.1e-183 648.7 1037 44.8
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 5.4e-183 646.4 1446 39.6
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 1.6e-182 644.8 1476 40.5
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 2.4e-154 551.2 1215 35.6
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 9.3e-151 539.3 1418 39.1
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.6e-150 538.5 580 60.3
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 1.3e-144 518.8 1487 33.8
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.3e-141 508.8 1423 34.6
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 3.2e-135 487.6 1265 37.5
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 6.7e-133 479.9 765 44.7
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 5.9e-129 466.8 1256 37.1
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 1.4e-125 455.7 1469 35.7
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.6e-118 432.2 608 46.5
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 4.2e-111 407.5 1273 34.1
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 4.4e-84 317.8 1428 32.7
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 4.6e-73 281.2 1309 28.6
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 3.4e-60 238.4 1185 29.6
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 4.1e-58 231.5 1464 25.1
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 1.0e-56 226.9 326 40.2
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 3.9e-56 224.9 802 34.7
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 4.3e-55 221.5 1450 25.7
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 6.2e-54 217.6 1315 26.8
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 1.3e-51 209.9 384 52.1
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 2.6e-44 185.7 211 53.1
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 1.9e-39 169.5 412 43.4
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 3.9e-32 145.2 172 48.3
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 1.4e-29 136.7 92 66.3
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 9.0e-29 134.0 315 37.1
Os06g0562700 Oryza sativa ssp. japonica HOM05D004594 ORTHO05D005225 1.2e-28 133.7 480 40.6
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 7.6e-28 131.0 71 88.7
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.4e-26 126.7 69 87.0
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 4.2e-26 125.2 236 41.9
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 7.1e-26 124.4 427 33.7
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 3.7e-22 112.1 61 88.5
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 3.1e-21 109.0 130 50.0
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.7e-17 95.9 69 65.2
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 6.1e-17 94.7 56 73.2
MBI02_g24140_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 9.7e-15 87.4 134 41.0
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 6.3e-14 84.7 758 25.5
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 8.2e-14 84.3 309 31.4
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 5.3e-13 81.6 73 57.5
SHI24778 Sapria himalayana HOM05D004594 ORTHO05D005225 5.3e-13 81.6 70 65.7
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 1.2e-12 80.5 50 68.0
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 2.0e-12 79.7 307 24.8
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.0e-12 79.7 50 72.0
A02p33250 Brassica napus HOM05D004594 ORTHO05D005225 3.8e-11 75.5 78 46.2
Actinidia04099 Actinidia chinensis HOM05D004594 ORTHO05D005225 8.5e-11 74.3 244 32.8
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 3.2e-10 72.4 43 72.1
BraA02t08348Z Brassica rapa HOM05D004594 ORTHO05D005225 2.0e-07 63.2 41 61.0
RcHm_v2.0_Chr3g0458311 Rosa chinensis HOM05D004594 ORTHO05D005225 3.7e-06 58.9 87 41.4


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