Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25094 Selenicereus undatus HOM05D002984 ORTHO05D003561 1.8e-190 669.1 329 100.0
Sc25g0002400 Simmondsia chinensis HOM05D002984 ORTHO05D003561 6.8e-41 172.2 204 48.0
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 4.8e-39 166.0 227 45.4
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 1.4e-38 164.5 148 54.7
AUR62002298 Chenopodium quinoa HOM05D002984 ORTHO05D003561 1.8e-38 164.1 218 46.3
AUR62015392 Chenopodium quinoa HOM05D002984 ORTHO05D003561 3.1e-38 163.3 218 44.5
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 1.2e-34 151.4 209 46.4
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 4.7e-34 149.4 204 45.6
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 6.1e-34 149.1 209 45.9
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 6.1e-34 149.1 209 47.8
Gorai.013G080300 Gossypium raimondii HOM05D002984 ORTHO05D003561 1.8e-33 147.5 251 41.0
CSS0018296 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 2.3e-33 147.1 207 45.4
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 2.3e-33 147.1 207 45.4
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 2.3e-33 147.1 203 44.3
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 3.0e-33 146.7 204 43.6
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 3.0e-33 146.7 204 44.6
Gohir.D13G070100 Gossypium hirsutum HOM05D002984 ORTHO05D003561 4.0e-33 146.4 251 41.0
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 4.0e-33 146.4 204 44.1
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 5.2e-33 146.0 204 43.6
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 5.2e-33 146.0 204 43.6
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 8.9e-33 145.2 204 42.6
FAN18G3612 Fragaria x ananassa HOM05D002984 ORTHO05D003561 8.9e-33 145.2 346 32.1
Gohir.A13G053428 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.5e-32 144.4 208 46.2
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 1.5e-32 144.4 204 44.6
FAN13G2905 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.0e-32 144.1 348 33.9
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.0e-32 144.1 204 43.1
FvH4_5g05460 Fragaria vesca HOM05D002984 ORTHO05D003561 3.4e-32 143.3 346 31.8
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 3.4e-32 143.3 204 44.1
TAR622G0040 Trochodendron aralioides HOM05D002984 ORTHO05D003561 9.8e-32 141.7 202 44.1
Ah.13g072880 Amaranthus hybridus HOM05D002984 ORTHO05D003561 1.3e-31 141.4 227 41.4
COL.COLO4_07881 Corchorus olitorius HOM05D002984 ORTHO05D003561 1.3e-31 141.4 204 40.7
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 3.7e-31 139.8 204 41.2
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 1.1e-30 138.3 162 47.5
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 1.8e-30 137.5 143 53.1
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 1.8e-30 137.5 204 41.2
vmacro10537 Vaccinium macrocarpon HOM05D002984 ORTHO05D003561 2.4e-30 137.1 201 42.8
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 4.1e-30 136.3 134 52.2
Nitab4.5_0000489g0040 Nicotiana tabacum HOM05D002984 ORTHO05D003561 5.4e-30 136.0 200 42.0
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 7.0e-30 135.6 202 41.6
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 7.0e-30 135.6 146 52.7
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 9.2e-30 135.2 145 51.7
Sabra02G0035000 Salix brachista HOM05D002984 ORTHO05D003561 1.2e-29 134.8 158 50.0
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 1.6e-29 134.4 158 48.7
Peaxi162Scf00004g01518 Petunia axillaris HOM05D002984 ORTHO05D003561 1.6e-29 134.4 200 42.5
SGA_v2.0_scaffold14G06838 Striga asiatica HOM05D002984 ORTHO05D003561 2.0e-29 134.0 319 33.5
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 2.7e-29 133.7 204 41.2
FAN12G2547 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.7e-29 133.7 204 41.2
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 2.7e-29 133.7 204 40.7
Dinv21122 Davidia involucrata HOM05D002984 ORTHO05D003561 5.9e-29 132.5 201 45.3
FAN18G2442 Fragaria x ananassa HOM05D002984 ORTHO05D003561 5.9e-29 132.5 133 51.9
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 5.9e-29 132.5 266 34.2
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 5.9e-29 132.5 209 41.1
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 1.0e-28 131.7 144 51.4
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 1.7e-28 131.0 155 50.3
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 1.7e-28 131.0 193 41.5
Eucgr.D01061 Eucalyptus grandis HOM05D002984 ORTHO05D003561 1.7e-28 131.0 165 47.9
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 2.3e-28 130.6 205 41.5
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 2.9e-28 130.2 144 50.7
MD16G1046800 Malus domestica HOM05D002984 ORTHO05D003561 2.9e-28 130.2 202 40.6
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 2.9e-28 130.2 202 40.6
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 5.0e-28 129.4 197 41.1
Nitab4.5_0005194g0020 Nicotiana tabacum HOM05D002984 ORTHO05D003561 5.0e-28 129.4 195 44.6
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 5.0e-28 129.4 199 40.2
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 5.0e-28 129.4 210 41.4
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 6.6e-28 129.0 202 40.6
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 8.6e-28 128.6 141 51.1
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 8.6e-28 128.6 207 43.0
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 1.1e-27 128.3 137 51.8
MD16G1047200 Malus domestica HOM05D002984 ORTHO05D003561 1.1e-27 128.3 202 39.6
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.5e-27 127.9 206 40.3
MBI01_g32855_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 1.9e-27 127.5 134 50.7
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 2.5e-27 127.1 144 50.0
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 4.3e-27 126.3 151 49.0
MBI01_g09372_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 5.6e-27 125.9 210 41.0
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 7.3e-27 125.6 205 40.0
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 7.3e-27 125.6 205 40.0
BolC3t19582H Brassica oleracea HOM05D002984 ORTHO05D003561 1.2e-26 124.8 209 41.6
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 1.2e-26 124.8 209 42.1
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 1.2e-26 124.8 139 53.2
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 1.2e-26 124.8 139 53.2
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 1.6e-26 124.4 221 37.1
Oeu041887.1 Olea europaea HOM05D002984 ORTHO05D003561 2.1e-26 124.0 159 49.7
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 4.7e-26 122.9 212 39.2
Lj2g0022832 Lotus japonicus HOM05D002984 ORTHO05D003561 4.7e-26 122.9 223 41.7
Lalb_Chr17g0341951 Lupinus albus HOM05D002984 ORTHO05D003561 6.1e-26 122.5 144 49.3
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 6.1e-26 122.5 212 39.6
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 8.0e-26 122.1 216 39.8
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 8.0e-26 122.1 211 40.3
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 8.0e-26 122.1 216 39.8
BraA08t34651Z Brassica rapa HOM05D002984 ORTHO05D003561 8.0e-26 122.1 211 40.3
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 8.0e-26 122.1 209 41.6
C05p24920 Brassica napus HOM05D002984 ORTHO05D003561 1.4e-25 121.3 216 39.8
CAN.G674.44 Capsicum annuum HOM05D002984 ORTHO05D003561 1.4e-25 121.3 151 49.7
Lj2g0024103 Lotus japonicus HOM05D002984 ORTHO05D003561 1.4e-25 121.3 236 39.0
SGA_v2.0_scaffold124G33581 Striga asiatica HOM05D002984 ORTHO05D003561 1.4e-25 121.3 184 46.2
AT1G25540 Arabidopsis thaliana HOM05D002984 ORTHO05D003561 1.8e-25 120.9 222 38.3
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 1.8e-25 120.9 226 38.9
Medtr5g054680 Medicago truncatula HOM05D002984 ORTHO05D003561 1.8e-25 120.9 161 44.7
Lsat_1_v5_gn_3_60001 Lactuca sativa HOM05D002984 ORTHO05D003561 2.3e-25 120.6 302 34.1
Lj2g0026621 Lotus japonicus HOM05D002984 ORTHO05D003561 2.3e-25 120.6 222 40.1
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 3.1e-25 120.2 209 41.1
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 4.0e-25 119.8 212 38.2
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 4.0e-25 119.8 215 39.1
Lsat_1_v5_gn_4_19021 Lactuca sativa HOM05D002984 ORTHO05D003561 5.2e-25 119.4 325 32.0
TPR.G38317 Trifolium pratense HOM05D002984 ORTHO05D003561 5.2e-25 119.4 161 46.6
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 6.8e-25 119.0 132 52.3
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea HOM05D002984 ORTHO05D003561 8.9e-25 118.6 162 47.5
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea HOM05D002984 ORTHO05D003561 8.9e-25 118.6 162 47.5
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 8.9e-25 118.6 181 42.5
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 1.2e-24 118.2 216 38.4
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 1.2e-24 118.2 216 38.4
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.2e-24 118.2 125 52.0
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 2.0e-24 117.5 136 47.1
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 2.0e-24 117.5 181 42.5
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 2.6e-24 117.1 222 37.8
Ca_19808_v3 Cicer arietinum L. HOM05D002984 ORTHO05D003561 3.4e-24 116.7 162 44.4
Glyma.02G098500 Glycine max HOM05D002984 ORTHO05D003561 7.5e-24 115.5 154 43.5
Sopen05g005530 Solanum pennellii HOM05D002984 ORTHO05D003561 9.8e-24 115.2 269 35.3
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 2.2e-23 114.0 138 49.3
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 2.9e-23 113.6 213 38.5
PGSC0003DMG401000817 Solanum tuberosum HOM05D002984 ORTHO05D003561 8.3e-23 112.1 245 37.6
Psat2g101040 Pisum sativum HOM05D002984 ORTHO05D003561 1.4e-22 111.3 291 32.3
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 2.4e-22 110.5 197 40.1
QL10p023599 Quercus lobata HOM05D002984 ORTHO05D003561 4.1e-22 109.8 125 48.8
Glyma.01G086600 Glycine max HOM05D002984 ORTHO05D003561 5.4e-22 109.4 130 44.6
THA.LOC104808226 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 9.2e-22 108.6 208 39.4
Lalb_Chr10g0099841 Lupinus albus HOM05D002984 ORTHO05D003561 1.2e-21 108.2 223 38.1
Nitab4.5_0000597g0030 Nicotiana tabacum HOM05D002984 ORTHO05D003561 1.6e-21 107.8 267 33.3
HanXRQChr17g0552241 Helianthus annuus HOM05D002984 ORTHO05D003561 6.0e-21 105.9 121 49.6
SHI14503 Sapria himalayana HOM05D002984 ORTHO05D003561 1.0e-20 105.1 145 44.8
Aa31LG7G8960 Aethionema arabicum HOM05D002984 ORTHO05D003561 1.3e-20 104.8 189 38.6
FAN03G1604 Fragaria x ananassa HOM05D002984 ORTHO05D003561 8.6e-20 102.1 111 49.5
CDE08G0495 Ceratophyllum demersum HOM05D002984 ORTHO05D003561 1.5e-19 101.3 132 47.0
ATR0681G393 Amborella trichopoda HOM05D002984 ORTHO05D003561 3.3e-19 100.1 143 44.8
Rhsim09G0111200 Rhododendron simsii HOM05D002984 ORTHO05D000550 3.3e-19 100.1 196 39.3
HanXRQChr17g0552251 Helianthus annuus HOM05D002984 ORTHO05D003561 4.3e-19 99.8 252 30.6
Dinv40427 Davidia involucrata HOM05D002984 ORTHO05D003561 2.1e-18 97.4 130 45.4
Medtr1g013000 Medicago truncatula HOM05D002984 ORTHO05D003561 2.8e-18 97.1 381 29.1
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 3.6e-18 96.7 195 37.4
SMO356G0715 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 4.7e-18 96.3 174 40.8
Nitab4.5_0000672g0110 Nicotiana tabacum HOM05D002984 ORTHO05D003561 4.0e-17 93.2 86 57.0
Solyc05g009710.4 Solanum lycopersicum HOM05D002984 ORTHO05D003561 1.2e-16 91.7 242 30.2
CAN.G2.30 Capsicum annuum HOM05D002984 ORTHO05D003561 4.4e-16 89.7 81 54.3
FAN10G3298 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.3e-15 88.2 103 44.7
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 2.9e-15 87.0 158 36.1
FvH4_5g12610 Fragaria vesca HOM05D002984 ORTHO05D003561 9.2e-14 82.0 118 41.5
FAN13G1615 Fragaria x ananassa HOM05D002984 ORTHO05D003561 9.2e-14 82.0 117 42.7
FAN18G2176 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.2e-13 81.6 118 40.7
FAN04G1620 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.6e-13 81.3 118 42.4
Pp3c25_2430 Physcomitrium patens HOM05D002984 ORTHO05D003561 2.1e-13 80.9 109 45.9
Pp3c25_2660 Physcomitrium patens HOM05D002984 ORTHO05D003561 2.7e-13 80.5 148 39.9
ECA246G2084 Erigeron canadensis HOM05D002984 ORTHO05D003561 3.5e-13 80.1 109 44.0
Psat3g000280 Pisum sativum HOM05D002984 ORTHO05D005363 3.5e-13 80.1 94 46.8
Sc04g0003680 Simmondsia chinensis HOM05D002984 ORTHO05D003561 6.0e-13 79.3 109 42.2
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 7.8e-13 79.0 94 47.9
FAN18G0496 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.9e-12 76.6 120 40.0
BcaC05g26654 Brassica carinata HOM05D002984 ORTHO05D003561 6.6e-12 75.9 142 37.3
CiPaw.16G003900 Carya illinoinensis HOM05D002984 ORTHO05D003561 8.6e-12 75.5 62 59.7
GSVIVG01008248001 Vitis vinifera HOM05D002984 ORTHO05D003561 1.1e-11 75.1 96 44.8
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 2.5e-11 73.9 122 39.3
ECA246G1507 Erigeron canadensis HOM05D002984 ORTHO05D003561 2.8e-10 70.5 126 36.5
PSO017G3087 Papaver somniferum HOM05D002984 ORTHO05D003561 1.2e-08 65.1 115 34.8
Glyma.20G031800 Glycine max HOM05D002984 ORTHO05D014229 5.8e-08 62.8 142 30.3
SEGI_22812 Sequoiadendron giganteum HOM05D014429 ORTHO05D003561 1.3e-07 61.6 76 44.7
Cpa.g.sc13.36 Carica papaya HOM05D002984 ORTHO05D003561 1.7e-07 61.2 96 36.5
SEGI_18915 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.7e-07 61.2 67 47.8
SEGI_32224 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 2.2e-07 60.8 82 43.9
RcHm_v2.0_Chr7g0184721 Rosa chinensis HOM05D002984 ORTHO05D003561 4.9e-07 59.7 85 42.4
CSS0008826 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 6.4e-07 59.3 124 33.1
SEGI_09967 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 8.3e-07 58.9 67 46.3
SEGI_16352 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 8.3e-07 58.9 67 46.3
SEGI_37982 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 7.1e-06 55.8 67 43.3
SEGI_25943 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 9.2e-06 55.5 60 50.0


User provided reference genes

Program Settings