Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 6.5e-78 293.9 139 100.0
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 5.9e-63 244.2 192 65.6
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 5.7e-58 227.6 138 80.4
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.4e-56 222.2 138 77.5
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 1.6e-55 219.5 136 77.2
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 3.5e-55 218.4 138 75.4
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 2.3e-54 215.7 146 71.9
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 1.6e-52 209.5 136 72.1
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 3.6e-52 208.4 144 70.1
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 3.6e-52 208.4 126 77.8
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 4.7e-52 208.0 124 76.6
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 8.0e-52 207.2 131 72.5
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.4e-51 206.5 125 78.4
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 1.4e-51 206.5 110 83.6
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 1.8e-51 206.1 135 71.1
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 1.8e-51 206.1 131 72.5
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 1.8e-51 206.1 131 71.0
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 1.8e-51 206.1 131 72.5
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 2.3e-51 205.7 135 71.9
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 6.8e-51 204.1 144 68.8
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 8.9e-51 203.8 107 85.0
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 8.9e-51 203.8 144 68.8
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 8.9e-51 203.8 140 68.6
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.2e-50 203.4 125 75.2
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.5e-50 203.0 114 82.5
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.5e-50 203.0 117 77.8
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 2.6e-50 202.2 144 67.4
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 2.6e-50 202.2 132 72.0
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 3.4e-50 201.8 131 70.2
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 4.4e-50 201.4 108 81.5
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 5.7e-50 201.1 144 66.7
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 9.8e-50 200.3 108 82.4
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.3e-49 199.9 108 80.6
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 4.9e-49 198.0 134 69.4
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 4.9e-49 198.0 125 73.6
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 6.4e-49 197.6 139 67.6
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 6.4e-49 197.6 107 81.3
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 1.1e-48 196.8 108 83.3
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 1.1e-48 196.8 108 83.3
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 1.1e-48 196.8 117 79.5
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 1.4e-48 196.4 108 81.5
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 1.4e-48 196.4 137 69.3
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 2.4e-48 195.7 108 77.8
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 2.4e-48 195.7 108 79.6
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 2.4e-48 195.7 111 78.4
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 3.2e-48 195.3 130 71.5
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 3.2e-48 195.3 108 79.6
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 4.1e-48 194.9 135 68.1
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 5.4e-48 194.5 108 81.5
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 7.0e-48 194.1 108 80.6
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 7.0e-48 194.1 108 80.6
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 7.0e-48 194.1 108 80.6
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 9.2e-48 193.7 108 79.6
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 9.2e-48 193.7 127 74.0
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 1.6e-47 193.0 131 70.2
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 2.0e-47 192.6 117 77.8
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.7e-47 192.2 106 81.1
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 2.7e-47 192.2 153 63.4
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 4.6e-47 191.4 106 80.2
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 4.6e-47 191.4 106 80.2
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 4.6e-47 191.4 108 78.7
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 4.6e-47 191.4 133 66.2
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 5.9e-47 191.0 124 70.2
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 1.0e-46 190.3 111 76.6
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 1.3e-46 189.9 111 75.7
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 1.3e-46 189.9 107 79.4
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.7e-46 189.5 115 72.2
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 1.7e-46 189.5 113 75.2
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 2.3e-46 189.1 115 76.5
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 3.0e-46 188.7 119 73.1
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 3.0e-46 188.7 108 79.6
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 6.6e-46 187.6 108 77.8
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 8.6e-46 187.2 133 64.7
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.1e-45 186.8 108 77.8
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 1.5e-45 186.4 107 77.6
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 1.5e-45 186.4 124 70.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 1.9e-45 186.0 139 61.9
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 2.5e-45 185.7 108 76.9
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 4.3e-45 184.9 126 67.5
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 1.2e-44 183.3 115 73.0
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 2.1e-44 182.6 135 64.4
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 3.6e-44 181.8 117 73.5
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 8.0e-44 180.6 121 72.7
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.3e-43 179.1 122 66.4
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 3.1e-43 178.7 107 74.8
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 5.2e-43 177.9 122 67.2
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 1.5e-42 176.4 113 72.6
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 2.0e-42 176.0 136 61.0
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 3.4e-42 175.3 117 69.2
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 4.4e-42 174.9 146 58.9
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 2.2e-41 172.6 111 68.5
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 2.9e-41 172.2 110 71.8
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 3.7e-41 171.8 160 53.8
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 4.9e-41 171.4 147 61.2
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 1.9e-40 169.5 136 63.2
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 3.2e-40 168.7 96 79.2
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 3.2e-40 168.7 147 57.1
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.7e-38 162.9 95 77.9
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.3e-38 162.5 95 77.9
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 1.5e-37 159.8 116 61.2
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 5.6e-37 157.9 115 63.5
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 1.2e-36 156.8 114 62.3
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 2.6e-34 149.1 107 58.9
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 6.6e-30 134.4 113 50.4
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 2.5e-29 132.5 102 58.8
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 2.0e-26 122.9 74 74.3
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 1.1e-24 117.1 114 50.0
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.0e-22 110.5 89 66.3
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 3.0e-22 109.0 96 54.2
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 3.6e-20 102.1 81 60.5
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 4.0e-19 98.6 130 40.8
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 8.9e-19 97.4 65 63.1
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 8.4e-17 90.9 51 78.4
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 5.4e-16 88.2 53 75.5
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 7.1e-16 87.8 53 75.5
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 9.3e-16 87.4 45 86.7
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 1.3e-14 83.6 53 71.7
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 6.6e-14 81.3 59 66.1
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 3.3e-13 79.0 50 70.0
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 5.6e-13 78.2 48 68.8
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 1.5e-10 70.1 43 69.8
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 2.9e-09 65.9 105 36.2
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 8.4e-09 64.3 77 33.8


User provided reference genes

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