Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23196 Selenicereus undatus HOM05D005375 ORTHO05D006598 1.7e-32 142.1 73 100.0
CSS0021148 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 1.3e-21 105.9 97 61.9
CSS0031566 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 1.3e-21 105.9 97 61.9
Dinv40796 Davidia involucrata HOM05D005375 ORTHO05D006598 1.3e-21 105.9 97 61.9
Nitab4.5_0007749g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 1.7e-21 105.5 97 61.9
Cpa.g.sc284.2 Carica papaya HOM05D005375 ORTHO05D006598 2.3e-21 105.1 97 60.8
TAR627G0180 Trochodendron aralioides HOM05D005375 ORTHO05D006598 2.3e-21 105.1 97 60.8
EL10Ac4g07689 Beta vulgaris HOM05D005375 ORTHO05D006598 2.9e-21 104.8 97 61.9
Cc05_g14340 Coffea canephora HOM05D005375 ORTHO05D006598 3.8e-21 104.4 97 60.8
Rhsim06G0223700 Rhododendron simsii HOM05D005375 ORTHO05D006598 3.8e-21 104.4 97 60.8
GSVIVG01037729001 Vitis vinifera HOM05D005375 ORTHO05D006598 3.8e-21 104.4 97 60.8
Cfa020276 Carpinus fangiana HOM05D005375 ORTHO05D006598 5.0e-21 104.0 97 60.8
Gohir.A04G011700 Gossypium hirsutum HOM05D005375 ORTHO05D006598 5.0e-21 104.0 97 60.8
Ciclev10008309m.g Citrus clementina HOM05D005375 ORTHO05D006598 6.6e-21 103.6 97 60.8
Nitab4.5_0001160g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 6.6e-21 103.6 97 60.8
THA.LOC104811633 Tarenaya hassleriana HOM05D005375 ORTHO05D006598 6.6e-21 103.6 97 60.8
MSTRG.6961 Avicennia marina HOM05D005375 ORTHO05D006598 8.6e-21 103.2 97 60.8
Zm00001eb281230 Zea mays HOM05D005375 ORTHO05D006598 8.6e-21 103.2 97 58.8
Dinv22229 Davidia involucrata HOM05D005375 ORTHO05D006598 1.1e-20 102.8 97 59.8
Lsat_1_v5_gn_9_90720 Lactuca sativa HOM05D005375 ORTHO05D006598 1.1e-20 102.8 97 60.8
Lalb_Chr00c48g0412951 Lupinus albus HOM05D005375 ORTHO05D006598 1.1e-20 102.8 97 60.8
Lalb_Chr04g0248131 Lupinus albus HOM05D005375 ORTHO05D006598 1.1e-20 102.8 97 60.8
Medtr5g093880 Medicago truncatula HOM05D005375 ORTHO05D006598 1.5e-20 102.4 97 59.8
SGA_v2.0_scaffold8G04388 Striga asiatica HOM05D005375 ORTHO05D006598 1.5e-20 102.4 97 58.8
Gohir.D05G374900 Gossypium hirsutum HOM05D005375 ORTHO05D006598 1.9e-20 102.1 97 58.8
Gorai.009G443800 Gossypium raimondii HOM05D005375 ORTHO05D006598 1.9e-20 102.1 97 58.8
Solyc07g064980.3 Solanum lycopersicum HOM05D005375 ORTHO05D006598 1.9e-20 102.1 97 58.8
Sopen07g033190 Solanum pennellii HOM05D005375 ORTHO05D006598 1.9e-20 102.1 97 58.8
PGSC0003DMG400022298 Solanum tuberosum HOM05D005375 ORTHO05D006598 1.9e-20 102.1 97 58.8
TAR624G1027 Trochodendron aralioides HOM05D005375 ORTHO05D006598 1.9e-20 102.1 97 59.8
CAN.G337.55 Capsicum annuum HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 59.8
Duzib170G0122 Durio zibethinus HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 59.8
Migut.M01705 Erythranthe guttata HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 58.8
Glyma.14G018200 Glycine max HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 59.8
Lj6g0028194 Lotus japonicus HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 59.8
Nitab4.5_0004445g0070 Nicotiana tabacum HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 59.8
Nitab4.5_0005078g0020 Nicotiana tabacum HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 59.8
HPP92_015778 Vanilla planifolia HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 59.8
VMungo0647G1984 Vigna mungo HOM05D005375 ORTHO05D006598 2.5e-20 101.7 97 59.8
Atru.chr2.3534 Acer truncatum HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
Atru.chr2.3553 Acer truncatum HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
Ca_06349_v3 Cicer arietinum L. HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 59.8
Duzib268G0742 Durio zibethinus HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
FvH4_5g39180 Fragaria vesca HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
FAN08G1518 Fragaria x ananassa HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
FAN13G1970 Fragaria x ananassa HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
FAN18G4382 Fragaria x ananassa HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
Lj1C881T5 Lonicera japonica HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
Phvul.008G272700 Phaseolus vulgaris HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
Prupe.8G266900 Prunus persica HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
RcHm_v2.0_Chr7g0241441 Rosa chinensis HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
Thecc.07G027900 Theobroma cacao HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 58.8
TAR629G0374 Trochodendron aralioides HOM05D005375 ORTHO05D006598 3.3e-20 101.3 97 59.8
Aqoxy1G04123 Aquilegia oxysepala HOM05D005375 ORTHO05D006598 4.2e-20 100.9 97 57.7
AUR62020339 Chenopodium quinoa HOM05D005375 ORTHO05D006598 4.2e-20 100.9 97 59.8
ATR1101G026 Amborella trichopoda HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 59.8
CiPaw.11G194800 Carya illinoinensis HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 58.8
AUR62015884 Chenopodium quinoa HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 58.8
HanXRQChr13g0408271 Helianthus annuus HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 58.8
MD03G1294800 Malus domestica HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 59.8
Manes.03G136300 Manihot esculenta HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 58.8
PSO210G0227 Papaver somniferum HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 57.7
PSO302G0025 Papaver somniferum HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 57.7
TPR.G35360 Trifolium pratense HOM05D005375 ORTHO05D006598 5.5e-20 100.5 97 58.8
CANSAT11G2127 Cannabis sativa HOM05D005375 ORTHO05D006598 7.2e-20 100.1 97 58.8
CDE04G3304 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 9.5e-20 99.8 97 57.7
COL.COLO4_09738 Corchorus olitorius HOM05D005375 ORTHO05D006598 9.5e-20 99.8 97 57.7
ECA240G0086 Erigeron canadensis HOM05D005375 ORTHO05D006598 9.5e-20 99.8 97 58.8
FAN04G2161 Fragaria x ananassa HOM05D005375 ORTHO05D006598 9.5e-20 99.8 97 57.7
Os06g0308800 Oryza sativa ssp. japonica HOM05D005375 ORTHO05D006598 9.5e-20 99.8 97 57.7
TWI38G0072 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 9.5e-20 99.8 97 57.7
Glyma.02G295200 Glycine max HOM05D005375 ORTHO05D006598 1.2e-19 99.4 97 58.8
Hma1.2p1_1332F.1_g276150 Hydrangea macrophylla HOM05D005375 ORTHO05D006598 1.2e-19 99.4 97 59.8
Psat2g009920 Pisum sativum HOM05D005375 ORTHO05D006598 1.2e-19 99.4 97 58.8
Potri.011G082000 Populus trichocarpa HOM05D005375 ORTHO05D006598 1.2e-19 99.4 97 56.7
MSTRG.12999 Avicennia marina HOM05D005375 ORTHO05D006598 1.6e-19 99.0 97 58.8
CSS0047507 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 2.1e-19 98.6 97 57.7
LjContig00272g0009776 Lotus japonicus HOM05D005375 ORTHO05D006598 2.1e-19 98.6 97 57.7
MD00G1179000 Malus domestica HOM05D005375 ORTHO05D006598 2.1e-19 98.6 97 57.7
Peaxi162Scf00235g00721 Petunia axillaris HOM05D005375 ORTHO05D006598 2.1e-19 98.6 103 57.3
A01p18000 Brassica napus HOM05D000504 ORTHO05D000403 2.8e-19 98.2 97 56.7
C01p22820 Brassica napus HOM05D000504 ORTHO05D006598 2.8e-19 98.2 97 56.7
BolC1t02212H Brassica oleracea HOM05D005375 ORTHO05D006598 2.8e-19 98.2 97 56.7
BraA01t01755Z Brassica rapa HOM05D000504 ORTHO05D000403 2.8e-19 98.2 97 56.7
Aa31LG5G12180 Aethionema arabicum HOM05D005375 ORTHO05D006598 3.6e-19 97.8 97 56.7
Migut.H01791 Erythranthe guttata HOM05D005375 ORTHO05D006598 3.6e-19 97.8 97 57.7
Carub.0007s1409 Capsella rubella HOM05D005375 ORTHO05D006598 4.7e-19 97.4 97 56.7
Thhalv10025139m.g Eutrema salsugineum HOM05D005375 ORTHO05D006598 4.7e-19 97.4 97 56.7
HanXRQChr03g0076881 Helianthus annuus HOM05D005375 ORTHO05D006598 4.7e-19 97.4 97 55.7
Sabra11G0065600 Salix brachista HOM05D005375 ORTHO05D006598 4.7e-19 97.4 97 55.7
Sp7g24730 Schrenkiella parvula HOM05D005375 ORTHO05D006598 4.7e-19 97.4 97 56.7
unitig_747.g21591 Utricularia gibba HOM05D005375 ORTHO05D006598 4.7e-19 97.4 97 56.7
AL7G26080 Arabidopsis lyrata HOM05D005375 ORTHO05D006598 6.1e-19 97.1 97 56.7
CDE07G0643 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 6.1e-19 97.1 97 57.7
QL08p007584 Quercus lobata HOM05D005375 ORTHO05D006598 6.1e-19 97.1 97 57.7
Sed0014032 Sechium edule HOM05D005375 ORTHO05D006598 8.0e-19 96.7 97 55.7
CARHR234370 Cardamine hirsuta HOM05D005375 ORTHO05D006598 1.0e-18 96.3 97 55.7
MELO3C014172.2 Cucumis melo HOM05D005375 ORTHO05D006598 1.0e-18 96.3 97 56.7
CsaV3_3G004730 Cucumis sativus L. HOM05D005375 ORTHO05D006598 1.0e-18 96.3 97 56.7
CSS0025851 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 1.4e-18 95.9 97 56.7
AT4G26750 Arabidopsis thaliana HOM05D005375 ORTHO05D006598 1.8e-18 95.5 97 55.7
Gorai.002G093900 Gossypium raimondii HOM05D005375 ORTHO05D006598 1.8e-18 95.5 97 56.7
SEGI_32868 Sequoiadendron giganteum HOM05D005375 ORTHO05D006598 1.8e-18 95.5 97 56.7
SMO271G0101 Selaginella moellendorffii HOM05D005375 ORTHO05D006598 2.3e-18 95.1 97 54.6
Eucgr.F03508 Eucalyptus grandis HOM05D005375 ORTHO05D006598 3.0e-18 94.7 97 55.7
Gohir.D01G071200 Gossypium hirsutum HOM05D005375 ORTHO05D006598 5.2e-18 94.0 97 56.7
Gohir.A01G084800 Gossypium hirsutum HOM05D005375 ORTHO05D006598 6.8e-18 93.6 96 56.2
PGR031G3708 Punica granatum HOM05D005375 ORTHO05D006598 1.2e-17 92.8 97 55.7
Actinidia05060 Actinidia chinensis HOM05D005375 ORTHO05D006598 2.0e-17 92.0 102 54.9
Nn1g07350 Nelumbo nucifera HOM05D005375 ORTHO05D006598 2.0e-17 92.0 92 56.5
TWI39G0687 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 7.5e-17 90.1 90 56.7
Mapoly0043s0080 Marchantia polymorpha HOM05D005375 ORTHO05D006598 1.7e-16 89.0 97 53.6
ClCG10G005050 Citrullus lanatus HOM05D005375 ORTHO05D006598 1.8e-15 85.5 125 44.0
DCAR_022591 Daucus carota HOM05D005375 ORTHO05D006598 1.8e-15 85.5 83 57.8
Lj8A173T72 Lonicera japonica HOM05D005375 ORTHO05D006598 2.4e-15 85.1 97 53.6
Pp3c12_1420 Physcomitrium patens HOM05D005375 ORTHO05D006598 4.1e-15 84.3 97 50.5
vmacro22307 Vaccinium macrocarpon HOM05D005375 ORTHO05D006598 7.0e-15 83.6 152 38.8
PGR031G2801 Punica granatum HOM05D005375 ORTHO05D006598 2.5e-12 75.1 93 49.5
DCAR_016648 Daucus carota HOM05D005375 ORTHO05D006598 4.3e-12 74.3 49 73.5
BcaC09g52262 Brassica carinata HOM05D005375 ORTHO05D006598 5.6e-12 73.9 49 71.4
AagrBONN_evm.TU.Sc2ySwM_368.1760 Anthoceros agrestis HOM05D005375 ORTHO05D006598 3.6e-11 71.2 49 65.3
CBR_g50394 Chara braunii HOM05D005375 ORTHO05D006598 1.2e-09 66.2 45 68.9
Sc16g0005720 Simmondsia chinensis HOM05D005375 ORTHO05D006598 1.4e-07 59.3 32 87.5
Oeu054311.1 Olea europaea HOM05D005375 ORTHO05D006598 9.2e-07 56.6 70 51.4
Actinidia37374 Actinidia chinensis HOM05D005375 ORTHO05D006598 6.0e-06 53.9 31 77.4


User provided reference genes

Program Settings