Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22380 Selenicereus undatus HOM05D004427 ORTHO05D005381 3.7e-165 584.7 282 100.0
QL03p001209 Quercus lobata HOM05D004427 ORTHO05D005381 1.4e-82 310.5 238 60.9
EL10Ac8g19614 Beta vulgaris HOM05D004427 ORTHO05D005381 1.9e-63 246.9 251 53.8
Potri.013G002700 Populus trichocarpa HOM05D004427 ORTHO05D005381 6.0e-62 241.9 242 51.7
EL10Ac9g22643 Beta vulgaris HOM05D004427 ORTHO05D005381 1.7e-61 240.4 254 50.8
DCAR_002673 Daucus carota HOM05D004427 ORTHO05D005381 6.2e-59 231.9 256 48.0
Sabra13G0002300 Salix brachista HOM05D004427 ORTHO05D005381 1.4e-58 230.7 242 50.4
AUR62003115 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.3e-56 224.2 238 50.4
vmacro14781 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 3.5e-54 216.1 224 50.0
Ah.03g139880 Amaranthus hybridus HOM05D004427 ORTHO05D005381 2.3e-53 213.4 252 48.4
TAR376G0174 Trochodendron aralioides HOM05D004427 ORTHO05D005381 2.5e-52 209.9 241 47.3
TAR629G2862 Trochodendron aralioides HOM05D004427 ORTHO05D005381 3.3e-52 209.5 240 45.4
Ah.02g123630 Amaranthus hybridus HOM05D004427 ORTHO05D005381 3.1e-50 203.0 252 47.2
Aqoxy4G03193 Aquilegia oxysepala HOM05D004427 ORTHO05D005381 3.1e-50 203.0 239 41.0
Ah.02g123640 Amaranthus hybridus HOM05D004427 ORTHO05D005381 2.0e-49 200.3 239 46.0
TAR371G1244 Trochodendron aralioides HOM05D004427 ORTHO05D005381 2.0e-49 200.3 240 44.2
Manes.04G026600 Manihot esculenta HOM05D004427 ORTHO05D005381 1.7e-48 197.2 243 43.6
TAR371G1167 Trochodendron aralioides HOM05D004427 ORTHO05D005381 2.2e-48 196.8 226 44.7
MD11G1123000 Malus domestica HOM05D004427 ORTHO05D005381 6.4e-48 195.3 236 41.5
CSS0010329 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.1e-47 194.5 237 43.0
AUR62025117 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.1e-47 194.5 238 42.9
Haze_23944 Corylus avellana HOM05D004427 ORTHO05D005381 1.1e-47 194.5 250 39.6
Dinv10838 Davidia involucrata HOM05D004427 ORTHO05D005381 4.1e-47 192.6 238 43.3
Eucgr.J00959 Eucalyptus grandis HOM05D004427 ORTHO05D005381 4.1e-47 192.6 238 41.6
QL01p036593 Quercus lobata HOM05D004427 ORTHO05D005381 5.4e-47 192.2 248 41.1
Cfa011378 Carpinus fangiana HOM05D004427 ORTHO05D005381 7.1e-47 191.8 237 41.4
AUR62037165 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.2e-46 191.0 238 42.9
Nn2g10653 Nelumbo nucifera HOM05D004427 ORTHO05D005381 1.2e-46 191.0 237 42.6
RcHm_v2.0_Chr5g0061241 Rosa chinensis HOM05D004427 ORTHO05D005381 3.5e-46 189.5 237 40.1
Ciclev10029217m.g Citrus clementina HOM05D004427 ORTHO05D005381 7.8e-46 188.3 238 41.6
COL.COLO4_25263 Corchorus olitorius HOM05D004427 ORTHO05D005381 7.8e-46 188.3 238 42.4
vmacro14479 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 2.3e-45 186.8 238 42.0
CiPaw.14G077000 Carya illinoinensis HOM05D004427 ORTHO05D005381 3.9e-45 186.0 240 40.8
FvH4_3g33710 Fragaria vesca HOM05D004427 ORTHO05D005381 3.9e-45 186.0 237 39.7
FAN25G0902 Fragaria x ananassa HOM05D004427 ORTHO05D005381 3.9e-45 186.0 237 39.7
TAR623G1453 Trochodendron aralioides HOM05D004427 ORTHO05D005381 3.9e-45 186.0 240 42.1
FAN16G3079 Fragaria x ananassa HOM05D004427 ORTHO05D005381 5.1e-45 185.7 237 38.4
FAN21G1733 Fragaria x ananassa HOM05D004427 ORTHO05D005381 5.1e-45 185.7 237 40.1
Hma1.2p1_2156F.1_g315430 Hydrangea macrophylla HOM05D004427 ORTHO05D005381 6.6e-45 185.3 237 41.8
ECA233G4215 Erigeron canadensis HOM05D004427 ORTHO05D005381 8.6e-45 184.9 236 38.6
Gohir.A05G075200 Gossypium hirsutum HOM05D004427 ORTHO05D005381 1.9e-44 183.7 237 41.8
Gohir.D05G078000 Gossypium hirsutum HOM05D004427 ORTHO05D005381 1.9e-44 183.7 237 41.8
Prupe.6G092400 Prunus persica HOM05D004427 ORTHO05D005381 1.9e-44 183.7 237 41.4
MD09G1211300 Malus domestica HOM05D004427 ORTHO05D005381 2.5e-44 183.3 236 39.4
Gorai.009G079500 Gossypium raimondii HOM05D004427 ORTHO05D005381 3.3e-44 183.0 237 41.8
FAN11G1819 Fragaria x ananassa HOM05D004427 ORTHO05D005381 4.3e-44 182.6 237 39.2
VMungo1127G1062 Vigna mungo HOM05D004427 ORTHO05D005381 5.6e-44 182.2 238 40.3
MSTRG.21151 Avicennia marina HOM05D004427 ORTHO05D005381 7.3e-44 181.8 240 40.0
PSO210G5092 Papaver somniferum HOM05D004427 ORTHO05D005381 1.2e-43 181.0 232 41.4
CANSAT54G0683 Cannabis sativa HOM05D004427 ORTHO05D005381 1.6e-43 180.6 239 40.6
ClCG02G020830 Citrullus lanatus HOM05D004427 ORTHO05D005381 1.6e-43 180.6 238 40.3
QL01p000714 Quercus lobata HOM05D004427 ORTHO05D005381 1.6e-43 180.6 237 43.5
GSVIVG01025117001 Vitis vinifera HOM05D004427 ORTHO05D005381 2.8e-43 179.9 236 40.3
CsaV3_6G021480 Cucumis sativus L. HOM05D004427 ORTHO05D005381 4.7e-43 179.1 238 39.9
Duzib150G0661 Durio zibethinus HOM05D004427 ORTHO05D005381 8.1e-43 178.3 238 41.6
Rhsim01G0221200 Rhododendron simsii HOM05D004427 ORTHO05D005381 8.1e-43 178.3 242 39.3
EL10Ac9g22377 Beta vulgaris HOM05D004427 ORTHO05D005381 1.1e-42 177.9 228 39.9
Sed0015128 Sechium edule HOM05D004427 ORTHO05D005381 1.1e-42 177.9 243 39.1
PGSC0003DMG400013475 Solanum tuberosum HOM05D004427 ORTHO05D005381 1.1e-42 177.9 239 40.2
Ca_19237_v3 Cicer arietinum L. HOM05D004427 ORTHO05D005381 1.4e-42 177.6 237 39.7
Lj1C183T1 Lonicera japonica HOM05D004427 ORTHO05D005381 1.4e-42 177.6 238 39.9
Phvul.011G071700 Phaseolus vulgaris HOM05D004427 ORTHO05D005381 2.4e-42 176.8 237 40.5
Sopen05g001320 Solanum pennellii HOM05D004427 ORTHO05D005381 2.4e-42 176.8 239 39.7
Thecc.09G261900 Theobroma cacao HOM05D004427 ORTHO05D005381 2.4e-42 176.8 238 41.6
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 5.2e-42 175.6 239 39.3
Lsat_1_v5_gn_6_24041 Lactuca sativa HOM05D004427 ORTHO05D005381 6.8e-42 175.3 236 39.0
TWI75G0497 Tripterygium wilfordii HOM05D004427 ORTHO05D005381 6.8e-42 175.3 238 37.4
ATR0069G023 Amborella trichopoda HOM05D004427 ORTHO05D005381 8.9e-42 174.9 230 40.4
DCAR_012615 Daucus carota HOM05D004427 ORTHO05D005381 8.9e-42 174.9 251 44.2
Glyma.12G072600 Glycine max HOM05D004427 ORTHO05D005381 1.2e-41 174.5 237 39.2
Duzib168G1361 Durio zibethinus HOM05D004427 ORTHO05D005381 1.5e-41 174.1 238 41.2
Lalb_Chr19g0137481 Lupinus albus HOM05D004427 ORTHO05D005381 1.5e-41 174.1 237 39.7
Lj3g0007721 Lotus japonicus HOM05D004427 ORTHO05D005381 2.0e-41 173.7 239 39.3
Psat7g222000 Pisum sativum HOM05D004427 ORTHO05D005381 2.0e-41 173.7 237 39.2
PGR119G1466 Punica granatum HOM05D004427 ORTHO05D005381 2.0e-41 173.7 238 39.5
Ah.02g113850 Amaranthus hybridus HOM05D004427 ORTHO05D005381 2.6e-41 173.3 230 40.4
MELO3C025732.2 Cucumis melo HOM05D004427 ORTHO05D005381 4.4e-41 172.6 238 37.8
CSS0042497 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 7.6e-41 171.8 238 38.7
CSS0008575 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 9.9e-41 171.4 214 40.7
SEGI_39191 Sequoiadendron giganteum HOM05D004427 ORTHO05D005381 2.2e-40 170.2 239 40.6
HanXRQChr02g0051371 Helianthus annuus HOM05D004427 ORTHO05D005381 4.9e-40 169.1 225 39.1
Migut.N02630 Erythranthe guttata HOM05D004427 ORTHO05D005381 6.4e-40 168.7 243 38.3
CSS0013146 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 8.4e-40 168.3 231 39.0
Medtr4g061080 Medicago truncatula HOM05D004427 ORTHO05D005381 8.4e-40 168.3 238 39.1
TPR.G2989 Trifolium pratense HOM05D004427 ORTHO05D005381 8.4e-40 168.3 237 38.4
arahy.Tifrunner.gnm1.ann1.T6X9B2 Arachis hypogaea HOM05D004427 ORTHO05D005381 1.1e-39 167.9 238 37.8
Cc01_g11690 Coffea canephora HOM05D004427 ORTHO05D005381 1.1e-39 167.9 235 37.9
THA.LOC104799482 Tarenaya hassleriana HOM05D004427 ORTHO05D005381 1.4e-39 167.5 228 38.6
arahy.Tifrunner.gnm1.ann1.JL7YN4 Arachis hypogaea HOM05D004427 ORTHO05D005381 1.9e-39 167.2 237 38.0
Nitab4.5_0000607g0030 Nicotiana tabacum HOM05D004427 ORTHO05D005381 1.9e-39 167.2 222 41.0
CAN.G765.37 Capsicum annuum HOM05D004427 ORTHO05D005381 4.2e-39 166.0 231 36.8
Nitab4.5_0000100g0070 Nicotiana tabacum HOM05D004427 ORTHO05D005381 4.2e-39 166.0 226 40.3
AUR62032911 Chenopodium quinoa HOM05D004427 ORTHO05D005381 9.3e-39 164.9 237 38.0
Oeu062268.1 Olea europaea HOM05D004427 ORTHO05D005381 1.6e-38 164.1 228 40.4
CAN.G354.26 Capsicum annuum HOM05D004427 ORTHO05D005381 2.1e-38 163.7 232 37.1
SHI06027 Sapria himalayana HOM05D004427 ORTHO05D005381 6.0e-38 162.2 237 38.0
Mapoly0009s0037 Marchantia polymorpha HOM05D004427 ORTHO05D005381 1.3e-37 161.0 252 34.5
Peaxi162Scf00155g00071 Petunia axillaris HOM05D004427 ORTHO05D005381 1.7e-37 160.6 224 37.1
Carub.0008s2094 Capsella rubella HOM05D004427 ORTHO05D005381 2.3e-37 160.2 228 36.4
AL817U10010 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 5.1e-37 159.1 230 35.7
Sp6g21820 Schrenkiella parvula HOM05D004427 ORTHO05D005381 5.1e-37 159.1 227 34.8
BcaB01g04643 Brassica carinata HOM05D004427 ORTHO05D005381 8.7e-37 158.3 228 36.4
A03p11310 Brassica napus HOM05D004427 ORTHO05D005381 8.7e-37 158.3 227 35.2
CARHR273870 Cardamine hirsuta HOM05D004427 ORTHO05D005381 8.7e-37 158.3 230 34.8
C03p13030 Brassica napus HOM05D004427 ORTHO05D005381 1.1e-36 157.9 230 35.7
BraA03t10444Z Brassica rapa HOM05D004427 ORTHO05D005381 1.1e-36 157.9 227 34.8
BolC3t13765H Brassica oleracea HOM05D004427 ORTHO05D005381 1.9e-36 157.1 228 36.0
Zm00001eb413910 Zea mays HOM05D004427 ORTHO05D005381 2.5e-36 156.8 237 40.1
AL8G36800 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 3.3e-36 156.4 227 35.2
AagrBONN_evm.TU.Sc2ySwM_344.2535 Anthoceros agrestis HOM05D004427 ORTHO05D005381 5.6e-36 155.6 246 35.0
Thhalv10014584m.g Eutrema salsugineum HOM05D004427 ORTHO05D005381 9.6e-36 154.8 231 36.8
Aa31LG1G12350 Aethionema arabicum HOM05D004427 ORTHO05D005381 2.1e-35 153.7 228 36.8
AT5G60190 Arabidopsis thaliana HOM05D004427 ORTHO05D005381 2.8e-35 153.3 230 33.9
unitig_0.g1522 Utricularia gibba HOM05D004427 ORTHO05D005381 2.8e-35 153.3 238 35.7
Lj3A845T93 Lonicera japonica HOM05D004427 ORTHO05D005381 3.1e-34 149.8 222 37.4
BcaB08g36313 Brassica carinata HOM05D004427 ORTHO05D005381 6.9e-34 148.7 208 37.5
CSS0048170 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.5e-33 147.5 227 37.4
Sc06g0007950 Simmondsia chinensis HOM05D004427 ORTHO05D005381 2.6e-33 146.7 168 44.6
EL10Ac5g12984 Beta vulgaris HOM05D004427 ORTHO05D005381 5.8e-33 145.6 219 37.4
A10p17340 Brassica napus HOM05D004427 ORTHO05D005381 5.8e-33 145.6 234 34.6
SMO367G1171 Selaginella moellendorffii HOM05D002435 ORTHO05D002550 5.8e-33 145.6 215 37.2
BraA10t43818Z Brassica rapa HOM05D004427 ORTHO05D005381 1.3e-32 144.4 234 35.9
FvH4_4g37251 Fragaria vesca HOM05D004427 ORTHO05D005381 1.7e-32 144.1 286 33.2
PSO210G2821 Papaver somniferum HOM05D004427 ORTHO05D005381 2.9e-32 143.3 225 37.8
CBR_g4323 Chara braunii HOM05D004427 ORTHO05D005381 8.4e-32 141.7 216 37.5
SGA_v2.0_scaffold80G25743 Striga asiatica HOM05D004427 ORTHO05D005381 8.4e-32 141.7 246 33.7
FvH4_6g48790 Fragaria vesca HOM05D004427 ORTHO05D005381 1.9e-31 140.6 305 32.5
Prupe.1G350400 Prunus persica HOM05D004427 ORTHO05D005381 5.4e-31 139.0 368 28.3
Os12g0102350 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 6.0e-30 135.6 238 35.7
Pp3c21_14830 Physcomitrium patens HOM05D004427 ORTHO05D005381 1.7e-29 134.0 213 34.7
RcHm_v2.0_Chr4g0447061 Rosa chinensis HOM05D004427 ORTHO05D005381 3.9e-29 132.9 159 43.4
DCAR_026152 Daucus carota HOM05D004427 ORTHO05D005381 6.6e-29 132.1 226 35.8
Os11g0102700 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 6.6e-29 132.1 239 36.0
Actinidia09505 Actinidia chinensis HOM05D004427 ORTHO05D005381 1.9e-28 130.6 153 49.0
FAN02G3329 Fragaria x ananassa HOM05D004427 ORTHO05D005381 4.3e-28 129.4 314 31.2
FAN05G2706 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.3e-27 127.9 273 33.0
Cre01.g055050 Chlamydomonas reinhardtii HOM05D004427 ORTHO05D005381 1.4e-26 124.4 214 35.5
MD00G1127100 Malus domestica HOM05D004427 ORTHO05D005381 1.8e-26 124.0 158 39.2
MCO07G761 Micromonas commoda HOM05D004427 ORTHO05D005381 2.9e-24 116.7 218 33.9
Os12g0127600 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 8.4e-24 115.2 224 29.5
FAN17G0248 Fragaria x ananassa HOM05D004427 ORTHO05D025555 7.9e-22 108.6 141 36.9
BcaC04g19664 Brassica carinata HOM05D004427 ORTHO05D005381 2.3e-21 107.1 234 30.3
FAN12G0369 Fragaria x ananassa HOM05D028185 ORTHO05D025555 2.3e-21 107.1 141 36.2
RcHm_v2.0_Chr4g0387651 Rosa chinensis HOM05D028185 ORTHO05D025555 1.1e-20 104.8 143 37.8
CSS0032605 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 9.6e-20 101.7 224 30.4
AUR62008635 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.3e-19 101.3 93 48.4
CDE04G2448 Ceratophyllum demersum HOM05D004427 ORTHO05D005381 1.1e-18 98.2 167 31.1
AUR62002202 Chenopodium quinoa HOM05D004427 ORTHO05D005381 2.4e-18 97.1 172 36.6
Solyc05g005310.3 Solanum lycopersicum HOM05D004427 ORTHO05D005381 2.4e-18 97.1 169 33.7
CSS0019084 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 5.8e-17 92.4 82 52.4
FAN17G0618 Fragaria x ananassa HOM05D000639 ORTHO05D006731 1.0e-16 91.7 250 27.2
CSS0026652 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 6.5e-16 89.0 82 51.2
C09p52680 Brassica napus HOM05D004427 ORTHO05D005381 1.9e-15 87.4 181 30.9
BolC9t58136H Brassica oleracea HOM05D004427 ORTHO05D005381 1.9e-15 87.4 181 30.9
FAN07G0825 Fragaria x ananassa HOM05D000639 ORTHO05D006731 2.1e-14 84.0 177 29.4
Os12g0103580 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 4.6e-14 82.8 224 29.0
FAN09G1397 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.3e-13 80.5 229 31.0
AUR62015500 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.5e-12 77.8 159 35.2
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 1.4e-10 71.2 212 27.8
Rhsim01G0258900 Rhododendron simsii HOM05D004427 ORTHO05D005381 4.1e-10 69.7 64 48.4
Lj1C183G2 Lonicera japonica HOM05D004427 ORTHO05D005381 9.0e-10 68.6 129 31.8
Manes.11G140201 Manihot esculenta HOM05D004427 ORTHO05D005381 2.6e-09 67.0 142 32.4
CAN.G682.5 Capsicum annuum HOM05D004427 ORTHO05D005381 7.6e-09 65.5 137 29.9


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