Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21770 Selenicereus undatus HOM05D003539 ORTHO05D004111 0.0e+00 1299.3 658 100.0
Hund28202 Selenicereus undatus HOM05D003539 ORTHO05D004111 6.2e-304 1047.0 698 79.7
Hund28214 Selenicereus undatus HOM05D003539 ORTHO05D004111 6.2e-304 1047.0 698 79.7
EL10Ac4g09711 Beta vulgaris HOM05D003539 ORTHO05D004111 7.7e-238 827.4 641 67.1
Sc06g0005250 Simmondsia chinensis HOM05D003539 ORTHO05D004111 1.0e-213 747.3 663 60.5
AUR62006940 Chenopodium quinoa HOM05D003539 ORTHO05D004111 1.0e-205 720.7 659 60.2
Ah.06g188300 Amaranthus hybridus HOM05D003539 ORTHO05D004111 6.8e-202 708.0 639 59.6
Dinv40214 Davidia involucrata HOM05D003539 ORTHO05D004111 2.3e-197 693.0 643 59.1
AUR62000583 Chenopodium quinoa HOM05D003539 ORTHO05D004111 2.5e-196 689.5 659 57.7
Hma1.2p1_0085F.1_g044410 Hydrangea macrophylla HOM05D003539 ORTHO05D004111 4.0e-194 682.2 636 58.0
GSVIVG01026448001 Vitis vinifera HOM05D003539 ORTHO05D004111 5.8e-193 678.3 638 57.7
CSS0035723 Camellia sinensis var. sinensis HOM05D003539 ORTHO05D004111 1.7e-192 676.8 644 57.9
TAR381G1444 Trochodendron aralioides HOM05D003539 ORTHO05D004111 1.3e-189 667.2 636 57.7
vmacro18474 Vaccinium macrocarpon HOM05D003539 ORTHO05D004111 8.7e-189 664.5 645 56.4
Dinv28297 Davidia involucrata HOM05D003539 ORTHO05D004111 1.9e-188 663.3 644 57.5
Manes.01G157300 Manihot esculenta HOM05D003539 ORTHO05D004111 5.3e-186 655.2 655 56.2
Nn5g28137 Nelumbo nucifera HOM05D003539 ORTHO05D004111 1.3e-184 650.6 638 55.6
TWI79G1391 Tripterygium wilfordii HOM05D003539 ORTHO05D004111 8.4e-184 647.9 647 54.6
Eucgr.J02557 Eucalyptus grandis HOM05D003539 ORTHO05D004111 2.4e-183 646.4 673 54.1
Atru.chr3.55 Acer truncatum HOM05D003539 ORTHO05D004111 5.5e-183 645.2 644 55.0
Lsat_1_v5_gn_5_30740 Lactuca sativa HOM05D003539 ORTHO05D004111 8.7e-181 637.9 634 55.5
Cfa007110 Carpinus fangiana HOM05D003539 ORTHO05D004111 2.5e-180 636.3 639 55.9
Haze_03640 Corylus avellana HOM05D003539 ORTHO05D004111 2.5e-180 636.3 639 55.9
QL06p053198 Quercus lobata HOM05D003539 ORTHO05D004111 2.4e-178 629.8 659 54.2
CiPaw.15G173100 Carya illinoinensis HOM05D003539 ORTHO05D004111 1.2e-177 627.5 631 56.1
Sed0003470 Sechium edule HOM05D003539 ORTHO05D004111 1.7e-176 623.6 647 53.5
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 8.4e-176 621.3 637 55.7
PGR044G1248 Punica granatum HOM05D003539 ORTHO05D004111 1.1e-175 620.9 645 53.6
Oeu010807.1 Olea europaea HOM05D003539 ORTHO05D004111 9.3e-175 617.8 637 54.9
Glyma.16G112800 Glycine max HOM05D003539 ORTHO05D004111 1.0e-173 614.4 664 52.9
Glyma.09G196200 Glycine max HOM05D003539 ORTHO05D004111 3.0e-173 612.8 652 53.1
Oeu063413.2 Olea europaea HOM05D003539 ORTHO05D004111 6.7e-173 611.7 645 54.9
ClCG02G000270 Citrullus lanatus HOM05D003539 ORTHO05D004111 1.5e-172 610.5 671 51.4
Gohir.D03G066500 Gossypium hirsutum HOM05D003539 ORTHO05D004111 1.5e-172 610.5 650 52.8
Gorai.003G064600 Gossypium raimondii HOM05D003539 ORTHO05D004111 4.3e-172 609.0 650 52.6
CANSAT35G0647 Cannabis sativa HOM05D003539 ORTHO05D004111 1.6e-171 607.1 664 52.4
Lj2C504G7 Lonicera japonica HOM05D003539 ORTHO05D004111 8.2e-171 604.7 529 60.7
HanXRQChr16g0510861 Helianthus annuus HOM05D003539 ORTHO05D004111 3.1e-170 602.8 629 53.1
Thecc.01G002200 Theobroma cacao HOM05D003539 ORTHO05D004111 3.1e-170 602.8 650 52.8
Cc07_g12170 Coffea canephora HOM05D003539 ORTHO05D004111 6.9e-170 601.7 661 53.0
Rhsim08G0026200 Rhododendron simsii HOM05D003539 ORTHO05D004111 9.0e-170 601.3 651 52.8
ECA233G1070 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-169 598.2 635 53.7
Potri.005G098500 Populus trichocarpa HOM05D003539 ORTHO05D004111 6.5e-168 595.1 665 50.5
Manes.11G091200 Manihot esculenta HOM05D003539 ORTHO05D004111 1.4e-167 594.0 650 52.6
MSTRG.20424 Avicennia marina HOM05D003539 ORTHO05D004111 1.9e-167 593.6 636 52.7
THA.LOC104814350 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 2.1e-166 590.1 625 52.8
Sc09g0001980 Simmondsia chinensis HOM05D003539 ORTHO05D004111 4.6e-166 589.0 532 60.2
Nitab4.5_0000855g0080 Nicotiana tabacum HOM05D003539 ORTHO05D004111 2.5e-164 583.2 646 53.6
Phvul.010G020100 Phaseolus vulgaris HOM05D003539 ORTHO05D004111 4.3e-164 582.4 638 52.7
VMungo1309G1473 Vigna mungo HOM05D003539 ORTHO05D004111 7.4e-164 581.6 635 52.1
Lalb_Chr05g0229501 Lupinus albus HOM05D003539 ORTHO05D004111 2.8e-163 579.7 646 51.1
Lalb_Chr09g0334501 Lupinus albus HOM05D003539 ORTHO05D004111 8.2e-163 578.2 649 50.8
Prupe.7G186400 Prunus persica HOM05D003539 ORTHO05D004111 8.2e-163 578.2 643 52.4
SGA_v2.0_scaffold172G38971 Striga asiatica HOM05D003539 ORTHO05D004111 2.4e-162 576.6 699 48.5
MD02G1108900 Malus domestica HOM05D003539 ORTHO05D004111 5.3e-162 575.5 656 51.4
SGA_v2.0_scaffold36G14401 Striga asiatica HOM05D003539 ORTHO05D004111 6.9e-162 575.1 637 52.0
Solyc02g082340.3 Solanum lycopersicum HOM05D003539 ORTHO05D004111 9.0e-162 574.7 625 53.9
arahy.Tifrunner.gnm1.ann1.VZS2MK Arachis hypogaea HOM05D003539 ORTHO05D004111 2.6e-161 573.2 751 45.7
arahy.Tifrunner.gnm1.ann1.4LH58N Arachis hypogaea HOM05D003539 ORTHO05D004111 4.5e-161 572.4 738 45.9
Nitab4.5_0000588g0180 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.7e-160 570.5 644 52.5
arahy.Tifrunner.gnm1.ann1.PPI4NM Arachis hypogaea HOM05D003539 ORTHO05D004111 2.2e-160 570.1 715 47.4
Sopen02g027000 Solanum pennellii HOM05D003539 ORTHO05D004111 2.2e-160 570.1 626 53.5
ClCG05G001500 Citrullus lanatus HOM05D003539 ORTHO05D004111 5.5e-159 565.5 671 48.6
Sabra05G0080900 Salix brachista HOM05D003539 ORTHO05D004111 7.2e-159 565.1 637 49.5
Nitab4.5_0003096g0020 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.2e-158 564.3 634 52.7
CAN.G1428.5 Capsicum annuum HOM05D003539 ORTHO05D004111 2.1e-158 563.5 635 52.0
Lj4g0013403 Lotus japonicus HOM05D003539 ORTHO05D004111 2.1e-158 563.5 655 51.5
arahy.Tifrunner.gnm1.ann1.UQ0JCX Arachis hypogaea HOM05D003539 ORTHO05D004111 4.6e-158 562.4 742 45.1
Migut.A00468 Erythranthe guttata HOM05D003539 ORTHO05D004111 2.3e-157 560.1 638 50.3
Sed0013779 Sechium edule HOM05D003539 ORTHO05D004111 1.3e-155 554.3 541 55.1
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 1.4e-154 550.8 583 52.3
FAN26G1725 Fragaria x ananassa HOM05D003539 ORTHO05D004111 6.9e-154 548.5 638 50.2
RcHm_v2.0_Chr2g0096801 Rosa chinensis HOM05D003539 ORTHO05D004111 2.0e-153 547.0 644 49.2
Aqoxy6G01535 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 1.3e-152 544.3 688 46.2
HanXRQChr09g0270331 Helianthus annuus HOM05D003539 ORTHO05D004111 1.7e-152 543.9 630 49.2
Ca_21575_v3 Cicer arietinum L. HOM05D003539 ORTHO05D004111 5.0e-152 542.3 637 49.6
FAN28G2151 Fragaria x ananassa HOM05D003539 ORTHO05D004111 8.5e-152 541.6 638 49.7
Actinidia28753 Actinidia chinensis HOM05D003539 ORTHO05D004111 1.1e-151 541.2 630 50.3
FvH4_1g10010 Fragaria vesca HOM05D003539 ORTHO05D004111 5.5e-151 538.9 638 49.4
Haze_00123 Corylus avellana HOM05D003539 ORTHO05D004111 1.2e-150 537.7 636 50.6
arahy.Tifrunner.gnm1.ann1.JIK3X3 Arachis hypogaea HOM05D003539 ORTHO05D004111 3.6e-150 536.2 725 44.6
MBI04_g31205_MAGBIO Magnolia biondii HOM05D003539 ORTHO05D004111 3.6e-150 536.2 632 49.5
Aa31LG6G11830 Aethionema arabicum HOM05D003539 ORTHO05D004111 6.1e-150 535.4 657 47.9
FAN23G2523 Fragaria x ananassa HOM05D003539 ORTHO05D004111 5.1e-149 532.3 657 48.4
FAN19G1026 Fragaria x ananassa HOM05D003539 ORTHO05D004111 6.7e-149 531.9 649 48.7
COL.COLO4_16224 Corchorus olitorius HOM05D003539 ORTHO05D004111 3.3e-148 529.6 645 47.9
MELO3C006107.2 Cucumis melo HOM05D003539 ORTHO05D004111 3.3e-148 529.6 559 51.5
Medtr4g117680 Medicago truncatula HOM05D003539 ORTHO05D004111 3.3e-148 529.6 654 48.3
CARHR128910 Cardamine hirsuta HOM05D003539 ORTHO05D004111 2.2e-147 526.9 647 47.4
Peaxi162Scf00677g00114 Petunia axillaris HOM05D003539 ORTHO05D004111 2.8e-147 526.6 637 50.5
Aa31LG10G6570 Aethionema arabicum HOM05D003539 ORTHO05D004111 3.7e-147 526.2 635 47.4
AL4G30740 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 1.4e-146 524.2 633 48.3
Duzib147G0916 Durio zibethinus HOM05D003539 ORTHO05D004111 5.3e-146 522.3 640 48.8
Carub.0004s1644 Capsella rubella HOM05D003539 ORTHO05D004111 3.5e-145 519.6 650 46.8
Thhalv10007103m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 1.0e-144 518.1 631 48.5
PSO017G0405 Papaver somniferum HOM05D003539 ORTHO05D004111 1.7e-144 517.3 648 46.0
Sp4g17040 Schrenkiella parvula HOM05D003539 ORTHO05D004111 3.2e-143 513.1 632 46.7
Aqoxy3G00418 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 4.2e-143 512.7 663 45.9
AT2G34750 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 4.2e-143 512.7 632 47.3
Thhalv10016395m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 3.0e-141 506.5 635 46.6
AL1G44630 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 4.0e-141 506.1 633 47.2
Psat7g042440 Pisum sativum HOM05D003539 ORTHO05D004111 5.2e-141 505.8 666 46.4
Psat3g044960 Pisum sativum HOM05D003539 ORTHO05D004111 6.7e-141 505.4 614 48.4
Cfa016374 Carpinus fangiana HOM05D003539 ORTHO05D004111 1.5e-140 504.2 609 48.8
TPR.G29658 Trifolium pratense HOM05D003539 ORTHO05D004111 2.6e-140 503.4 661 46.0
THA.LOC104798595 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 2.8e-139 500.0 566 49.6
PSO170G6051 Papaver somniferum HOM05D003539 ORTHO05D004111 4.8e-139 499.2 646 45.2
BcaB06g28796 Brassica carinata HOM05D003539 ORTHO05D004111 1.2e-137 494.6 630 46.7
Carub.0001s2885 Capsella rubella HOM05D003539 ORTHO05D004111 2.0e-137 493.8 623 47.0
Aqoxy3G00897 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 2.2e-136 490.3 612 47.9
Os06g0688100 Oryza sativa ssp. japonica HOM05D003539 ORTHO05D004111 4.2e-135 486.1 650 43.8
Peaxi162Scf00344g01722 Petunia axillaris HOM05D003539 ORTHO05D004111 5.5e-135 485.7 672 46.0
unitig_699.g19839 Utricularia gibba HOM05D003539 ORTHO05D004111 1.6e-134 484.2 632 47.0
BolC3t14644H Brassica oleracea HOM05D003539 ORTHO05D004111 2.7e-134 483.4 633 45.7
C03p22480 Brassica napus HOM05D003539 ORTHO05D004111 6.1e-134 482.3 633 45.7
BraA03t11183Z Brassica rapa HOM05D003539 ORTHO05D004111 6.1e-134 482.3 637 45.7
A03p19290 Brassica napus HOM05D003539 ORTHO05D004111 1.8e-133 480.7 637 45.5
CDE07G0217 Ceratophyllum demersum HOM05D003539 ORTHO05D004111 2.0e-132 477.2 566 47.9
A04p26550 Brassica napus HOM05D003539 ORTHO05D004111 8.3e-131 471.9 636 43.9
BraA04t18159Z Brassica rapa HOM05D003539 ORTHO05D004111 7.7e-129 465.3 660 42.6
AT1G30590 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 2.9e-128 463.4 627 45.9
Peaxi162Scf00015g00939 Petunia axillaris HOM05D003539 ORTHO05D004111 1.9e-119 434.1 644 43.9
BraA05t20035Z Brassica rapa HOM05D003539 ORTHO05D004111 1.4e-117 427.9 628 42.4
BolC4t22991H Brassica oleracea HOM05D003539 ORTHO05D004111 3.0e-117 426.8 639 41.6
SEGI_33601 Sequoiadendron giganteum HOM05D003539 ORTHO05D004111 5.7e-116 422.5 654 40.2
Zm00001eb226160 Zea mays HOM05D003539 ORTHO05D004111 5.7e-116 422.5 649 40.8
Carub.0004s2129 Capsella rubella HOM05D003539 ORTHO05D004111 5.4e-114 416.0 628 41.1
AL4G35010 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 2.7e-113 413.7 627 41.0
C04p14010 Brassica napus HOM05D003539 ORTHO05D004111 5.9e-113 412.5 635 41.3
Gohir.A02G120000 Gossypium hirsutum HOM05D003539 ORTHO05D004111 7.8e-113 412.1 458 51.1
ATR0605G358 Amborella trichopoda HOM05D003539 ORTHO05D004111 3.0e-112 410.2 550 43.1
AT2G39240 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 1.4e-109 401.4 637 41.4
BcaC06g35972 Brassica carinata HOM05D003539 ORTHO05D004111 1.1e-106 391.7 627 38.9
C07p01640 Brassica napus HOM05D003539 ORTHO05D004111 3.0e-104 383.6 604 39.4
Mapoly0144s0013 Marchantia polymorpha HOM05D003539 ORTHO05D004111 1.2e-100 371.7 712 35.3
BcaC02g11551 Brassica carinata HOM05D003539 ORTHO05D004111 2.9e-99 367.1 650 38.5
Pp3c21_14490 Physcomitrium patens HOM05D003539 ORTHO05D004111 2.7e-97 360.5 743 35.4
Pp3c18_6750 Physcomitrium patens HOM05D003539 ORTHO05D004111 3.3e-95 353.6 675 35.4
Pp3c18_6751 Physcomitrium patens HOM05D003539 ORTHO05D004111 3.3e-95 353.6 675 35.4
SMO356G0429 Selaginella moellendorffii HOM05D003539 ORTHO05D004111 1.2e-92 345.1 639 35.8
SalBow7G2073 Salvia bowleyana HOM05D003539 ORTHO05D004111 2.2e-91 340.9 378 51.1
AL4G36550 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 2.7e-89 334.0 592 38.5
Actinidia02872 Actinidia chinensis HOM05D003539 ORTHO05D004111 4.7e-86 323.2 336 54.2
Actinidia20763 Actinidia chinensis HOM05D003539 ORTHO05D004111 6.2e-86 322.8 353 52.4
BcaC01g05764 Brassica carinata HOM05D003539 ORTHO05D004111 2.6e-84 317.4 405 45.2
C04p63970 Brassica napus HOM05D003539 ORTHO05D004111 9.9e-84 315.5 449 42.3
Actinidia20762 Actinidia chinensis HOM05D003539 ORTHO05D004111 2.1e-81 307.8 298 56.0
FAN23G0637 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.3e-78 298.5 367 47.1
HPP92_018392 Vanilla planifolia HOM05D003539 ORTHO05D004111 2.8e-78 297.4 429 43.4
C07p01430 Brassica napus HOM05D003539 ORTHO05D004111 9.9e-76 288.9 456 39.5
AagrBONN_evm.TU.Sc2ySwM_368.2744 Anthoceros agrestis HOM05D003539 ORTHO05D004111 4.3e-71 273.5 566 33.7
Oeu000297.1 Olea europaea HOM05D003539 ORTHO05D004111 4.2e-66 256.9 259 56.4
DCAR_007550 Daucus carota HOM05D003539 ORTHO05D004111 3.9e-64 250.4 273 53.1
SalBow7G0297 Salvia bowleyana HOM05D003539 ORTHO05D004111 1.9e-63 248.1 263 53.2
SHI13961 Sapria himalayana HOM05D003539 ORTHO05D004111 2.1e-62 244.6 357 40.9
BolC4t27866H Brassica oleracea HOM05D003539 ORTHO05D004111 6.7e-56 223.0 261 49.4
Ciclev10010838m.g Citrus clementina HOM05D003539 ORTHO05D004111 4.8e-54 216.9 189 60.8
DCAR_007549 Daucus carota HOM05D003539 ORTHO05D004111 9.0e-53 212.6 177 61.6
Cre03.g207950 Chlamydomonas reinhardtii HOM05D003539 ORTHO05D004111 1.3e-48 198.7 650 26.5
BcaC06g35980 Brassica carinata HOM05D003539 ORTHO05D004111 2.3e-48 198.0 264 44.3
Gohir.A02G119802 Gossypium hirsutum HOM05D003539 ORTHO05D004111 2.3e-48 198.0 170 60.0
GSVIVG01026439001 Vitis vinifera HOM05D003539 ORTHO05D004111 8.5e-43 179.5 163 54.0
BcaB05g23816 Brassica carinata HOM05D003539 ORTHO05D004111 1.2e-41 175.6 334 34.1
PSO782G3432 Papaver somniferum HOM05D003539 ORTHO05D004111 7.9e-41 172.9 310 37.1
RcHm_v2.0_Chr2g0096841 Rosa chinensis HOM05D003539 ORTHO05D004111 3.7e-38 164.1 203 46.3
PRCOL_00004831 Prasinoderma coloniale HOM05D003539 ORTHO05D004111 1.4e-34 152.1 581 24.8
EL10Ac6g14558 Beta vulgaris HOM05D003539 ORTHO05D004111 1.2e-33 149.1 109 67.0
CBR_g23271 Chara braunii HOM05D003539 ORTHO05D004111 6.1e-33 146.7 352 30.4
arahy.Tifrunner.gnm1.ann1.PJLZ8M Arachis hypogaea HOM05D003539 ORTHO05D004111 1.6e-25 122.1 145 49.0
BcaC06g35981 Brassica carinata HOM05D003539 ORTHO05D004111 1.8e-24 118.6 208 35.6
CBR_g23267 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-23 114.8 187 36.4
Cfa022324 Carpinus fangiana HOM05D003539 ORTHO05D004111 1.7e-22 112.1 623 23.0
Cpa.g.sc7.212 Carica papaya HOM05D003539 ORTHO05D004111 6.3e-22 110.2 180 37.8
HanXRQChr05g0145981 Helianthus annuus HOM05D003539 ORTHO05D004111 5.3e-21 107.1 140 44.3
Cfa022001 Carpinus fangiana HOM05D003539 ORTHO05D004111 3.5e-20 104.4 122 47.5
MCO15G598 Micromonas commoda HOM05D003539 ORTHO05D004111 5.5e-18 97.1 579 21.8
Cpa.g.sc7.213 Carica papaya HOM05D003539 ORTHO05D004111 6.1e-17 93.6 89 52.8
Potri.007G065101 Populus trichocarpa HOM05D003539 ORTHO05D004111 2.7e-12 78.2 143 37.8
C03p59690 Brassica napus HOM05D003539 ORTHO05D004111 3.8e-11 74.3 70 52.9
BolC3t18231H Brassica oleracea HOM05D003539 ORTHO05D004111 3.8e-11 74.3 70 52.9
Medtr8g085920 Medicago truncatula HOM05D003539 ORTHO05D004111 1.6e-09 68.9 105 41.0
Prupe.7G186500 Prunus persica HOM05D003539 ORTHO05D004111 8.8e-08 63.2 102 42.2
Ciclev10010647m.g Citrus clementina HOM05D003539 ORTHO05D004111 2.6e-07 61.6 91 45.1
Medtr4g117730 Medicago truncatula HOM05D003539 ORTHO05D004111 9.8e-07 59.7 68 47.1
RcHm_v2.0_Chr2g0096831 Rosa chinensis HOM05D003539 ORTHO05D004111 8.3e-06 56.6 103 32.0


User provided reference genes

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