Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 5.8e-115 417.5 208 100.0
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 3.1e-68 262.3 186 74.2
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 5.9e-67 258.1 185 69.7
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.7e-66 256.5 184 68.5
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.3e-66 256.1 186 72.6
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 6.6e-66 254.6 186 68.8
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 8.6e-66 254.2 195 65.6
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 1.1e-65 253.8 166 73.5
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 1.1e-65 253.8 179 69.8
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 1.1e-65 253.8 179 69.8
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.5e-65 253.4 184 66.8
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.5e-65 253.4 184 68.5
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.9e-65 253.1 184 68.5
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.9e-65 253.1 184 68.5
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.9e-65 253.1 189 66.7
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 2.5e-65 252.7 194 67.5
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 3.3e-65 252.3 186 66.7
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 3.3e-65 252.3 187 68.4
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 4.2e-65 251.9 185 68.1
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 4.2e-65 251.9 186 67.2
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 7.2e-65 251.1 186 68.8
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 7.2e-65 251.1 168 73.2
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 9.5e-65 250.8 187 69.0
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 9.5e-65 250.8 185 69.7
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.2e-64 250.4 184 67.4
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.6e-64 250.0 184 66.3
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 2.1e-64 249.6 188 64.9
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 2.8e-64 249.2 186 65.6
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 2.8e-64 249.2 165 70.3
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 3.6e-64 248.8 186 67.7
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 4.7e-64 248.4 186 67.7
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 6.1e-64 248.1 163 76.1
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.1e-64 248.1 186 68.3
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 6.1e-64 248.1 163 74.8
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 1.0e-63 247.3 163 75.5
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.4e-63 246.9 171 71.9
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.8e-63 246.5 182 64.3
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.8e-63 246.5 164 73.2
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 2.3e-63 246.1 185 65.4
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 2.3e-63 246.1 189 65.6
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.3e-63 246.1 182 67.0
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 4.0e-63 245.4 168 70.8
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 4.0e-63 245.4 186 66.7
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 4.0e-63 245.4 186 66.7
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 4.0e-63 245.4 186 66.7
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 5.2e-63 245.0 191 66.5
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.2e-63 245.0 190 66.3
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 5.2e-63 245.0 178 68.0
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 6.8e-63 244.6 188 67.6
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 8.9e-63 244.2 185 65.4
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 8.9e-63 244.2 185 65.4
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 1.2e-62 243.8 163 71.2
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.2e-62 243.8 186 65.6
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.5e-62 243.4 185 66.5
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.0e-62 243.0 190 65.3
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 2.0e-62 243.0 186 68.3
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.0e-62 243.0 185 66.5
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 2.6e-62 242.7 187 67.4
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 3.4e-62 242.3 160 75.6
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 3.4e-62 242.3 168 70.2
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 4.4e-62 241.9 184 66.3
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 4.4e-62 241.9 161 73.3
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 4.4e-62 241.9 163 74.2
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 4.4e-62 241.9 186 65.6
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 4.4e-62 241.9 190 62.1
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 5.7e-62 241.5 183 68.3
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 5.7e-62 241.5 183 67.2
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 7.5e-62 241.1 162 72.2
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 7.5e-62 241.1 163 71.2
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 9.8e-62 240.7 182 65.4
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 9.8e-62 240.7 166 70.5
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 9.8e-62 240.7 216 61.1
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.3e-61 240.4 160 72.5
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.3e-61 240.4 164 72.0
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.7e-61 240.0 180 68.3
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.7e-61 240.0 184 67.4
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 2.2e-61 239.6 182 65.4
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 2.8e-61 239.2 179 64.8
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.8e-61 239.2 173 70.5
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 2.8e-61 239.2 185 65.4
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.8e-61 239.2 190 64.2
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.8e-61 239.2 189 64.6
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 4.9e-61 238.4 188 64.4
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 6.3e-61 238.0 163 69.9
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 6.3e-61 238.0 166 69.3
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 8.3e-61 237.7 162 71.6
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 1.1e-60 237.3 185 65.9
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 1.1e-60 237.3 185 65.9
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.1e-60 237.3 183 65.6
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.1e-60 237.3 175 67.4
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.4e-60 236.9 185 63.2
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.4e-60 236.9 162 72.8
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.8e-60 236.5 189 63.0
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.8e-60 236.5 188 66.0
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.8e-60 236.5 160 72.5
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.4e-60 236.1 197 62.9
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 3.1e-60 235.7 183 65.0
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 4.1e-60 235.3 166 68.7
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 4.1e-60 235.3 161 71.4
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 4.1e-60 235.3 162 71.6
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 5.4e-60 235.0 188 64.4
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 5.4e-60 235.0 184 61.4
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 5.4e-60 235.0 188 63.8
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 5.4e-60 235.0 188 63.8
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 7.0e-60 234.6 179 66.5
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 9.2e-60 234.2 188 64.9
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.2e-59 233.8 184 63.0
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 1.6e-59 233.4 189 61.4
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 7.8e-59 231.1 162 71.6
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.0e-58 230.7 167 68.3
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.0e-58 230.7 167 68.3
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.0e-58 230.7 168 66.1
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 1.3e-58 230.3 161 68.3
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.3e-58 230.3 165 70.9
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 2.3e-58 229.6 186 62.9
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.3e-58 229.6 196 61.7
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 2.9e-58 229.2 144 75.7
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 5.0e-58 228.4 186 64.0
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 6.6e-58 228.0 169 66.3
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.1e-57 227.3 184 65.2
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.9e-57 226.5 165 70.3
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 2.5e-57 226.1 165 69.7
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 3.3e-57 225.7 194 60.8
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 5.6e-57 224.9 162 67.9
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 9.5e-57 224.2 191 61.8
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 1.2e-56 223.8 191 62.3
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 2.1e-56 223.0 161 68.9
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 2.8e-56 222.6 185 62.7
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 6.1e-56 221.5 171 64.9
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 6.1e-56 221.5 167 67.1
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.8e-55 219.9 160 67.5
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 6.8e-55 218.0 141 74.5
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 2.9e-53 212.6 159 66.7
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 6.4e-53 211.5 164 67.7
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 6.0e-51 204.9 241 49.4
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.8e-48 196.1 184 56.5
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 2.5e-41 172.9 143 61.5
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.6e-40 170.2 174 51.7
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 2.6e-38 162.9 161 55.9
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 3.7e-37 159.1 100 73.0
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 1.9e-36 156.8 100 73.0
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 7.8e-35 151.4 209 44.5
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.1e-31 141.0 184 41.8
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 6.4e-29 131.7 133 51.9
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.7e-27 126.3 98 62.2
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 9.9e-22 107.8 72 70.8
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 4.9e-21 105.5 64 75.0
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 8.4e-21 104.8 64 75.0
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 4.2e-20 102.4 62 71.0
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 5.4e-20 102.1 64 71.9
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 3.9e-18 95.9 152 42.8
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.0e-15 85.9 57 68.4
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 5.3e-15 85.5 84 52.4
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 6.4e-13 78.6 40 87.5
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 2.7e-11 73.2 99 43.4
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.6e-11 72.4 74 58.1
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 4.8e-08 62.4 193 31.6
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.8e-06 55.5 170 31.2


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