Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21512 Selenicereus undatus HOM05D007098 ORTHO05D008793 1.8e-208 729.9 714 100.0
AUR62025750 Chenopodium quinoa HOM05D007098 ORTHO05D008793 9.3e-104 382.1 404 77.2
AUR62001258 Chenopodium quinoa HOM05D007098 ORTHO05D008793 4.6e-103 379.8 404 77.5
Ah.08g218330 Amaranthus hybridus HOM05D007098 ORTHO05D008793 2.2e-100 370.9 614 77.2
EL10Ac7g18049 Beta vulgaris HOM05D007098 ORTHO05D008793 1.5e-98 364.8 615 77.1
GSVIVG01007576001 Vitis vinifera HOM05D007098 ORTHO05D008793 3.9e-94 350.1 269 65.1
Duzib205G2031 Durio zibethinus HOM05D007098 ORTHO05D008793 3.1e-91 340.5 629 76.9
Haze_07291 Corylus avellana HOM05D007098 ORTHO05D008793 4.1e-91 340.1 276 62.3
CiPaw.11G013600 Carya illinoinensis HOM05D007098 ORTHO05D008793 1.0e-89 335.5 276 61.2
Hma1.2p1_0014F.1_g009950 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 4.2e-88 330.1 631 73.5
CSS0030055 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 7.2e-88 329.3 273 60.4
QL10p005624 Quercus lobata HOM05D007098 ORTHO05D008793 2.7e-87 327.4 630 72.7
MD06G1160200 Malus domestica HOM05D007098 ORTHO05D008793 1.4e-86 325.1 406 71.9
FAN18G2243 Fragaria x ananassa HOM05D007098 ORTHO05D008793 3.0e-86 323.9 270 58.1
FAN13G2898 Fragaria x ananassa HOM05D007098 ORTHO05D008793 8.8e-86 322.4 270 57.8
Dinv11119 Davidia involucrata HOM05D002040 ORTHO05D002502 1.1e-85 322.0 280 58.6
FvH4_5g07010 Fragaria vesca HOM05D007098 ORTHO05D008793 5.7e-85 319.7 269 58.7
FAN04G0983 Fragaria x ananassa HOM05D007098 ORTHO05D008793 5.7e-85 319.7 270 58.1
RcHm_v2.0_Chr7g0191671 Rosa chinensis HOM05D007098 ORTHO05D008793 5.7e-85 319.7 270 58.5
CANSAT80G2237 Cannabis sativa HOM05D007098 ORTHO05D008793 1.3e-84 318.5 273 57.5
Thecc.03G120500 Theobroma cacao HOM05D007098 ORTHO05D008793 1.3e-84 318.5 279 56.3
Prupe.5G160200 Prunus persica HOM05D007098 ORTHO05D008793 2.8e-84 317.4 613 76.0
Manes.06G113500 Manihot esculenta HOM05D007098 ORTHO05D008793 4.8e-84 316.6 265 61.5
TAR371G0113 Trochodendron aralioides HOM05D007098 ORTHO05D008793 6.3e-84 316.2 276 57.2
MBI11_g46348_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 2.4e-83 314.3 273 59.0
Dinv38489 Davidia involucrata HOM05D007098 ORTHO05D008793 4.1e-83 313.5 273 57.9
Gorai.001G062100 Gossypium raimondii HOM05D007098 ORTHO05D008793 5.3e-83 313.2 286 55.2
Sc22g0003940 Simmondsia chinensis HOM05D007098 ORTHO05D008793 9.1e-83 312.4 666 71.9
TWI39G0887 Tripterygium wilfordii HOM05D007098 ORTHO05D008793 1.6e-82 311.6 618 72.2
Cpa.g.sc4.42 Carica papaya HOM05D007098 ORTHO05D008793 4.5e-82 310.1 279 53.8
Gohir.D07G058600 Gossypium hirsutum HOM05D007098 ORTHO05D008793 1.3e-81 308.5 286 54.5
Sabra12G0066500 Salix brachista HOM05D007098 ORTHO05D008793 2.2e-81 307.8 617 72.3
Gohir.A07G054300 Gossypium hirsutum HOM05D007098 ORTHO05D008793 3.8e-81 307.0 285 54.4
CSS0038177 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 6.5e-81 306.2 273 57.5
Phvul.011G039200 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 1.1e-80 305.4 402 68.7
Nn5g28372 Nelumbo nucifera HOM05D007098 ORTHO05D008793 4.2e-80 303.5 271 57.2
Cfa018906 Carpinus fangiana HOM05D007098 ORTHO05D008793 7.2e-80 302.8 201 71.1
Atru.chr9.986 Acer truncatum HOM05D007098 ORTHO05D008793 1.6e-79 301.6 272 57.4
Lj2g0008135 Lotus japonicus HOM05D007098 ORTHO05D008793 6.1e-79 299.7 274 56.9
Ciclev10019054m.g Citrus clementina HOM05D007098 ORTHO05D008793 1.4e-78 298.5 625 71.2
Peaxi162Scf00089g00927 Petunia axillaris HOM05D007098 ORTHO05D008793 1.4e-78 298.5 270 56.3
ClCG03G003340 Citrullus lanatus HOM05D007098 ORTHO05D008793 2.3e-78 297.7 272 55.9
VMungo1127G2011 Vigna mungo HOM05D007098 ORTHO05D008793 2.3e-78 297.7 400 68.5
Glyma.12G037500 Glycine max HOM05D007098 ORTHO05D008793 6.7e-78 296.2 400 69.0
MSTRG.9703 Avicennia marina HOM05D007098 ORTHO05D008793 1.1e-77 295.4 408 66.9
Potri.012G091800 Populus trichocarpa HOM05D007098 ORTHO05D008793 2.6e-77 294.3 620 71.1
Actinidia16202 Actinidia chinensis HOM05D007098 ORTHO05D008793 5.7e-77 293.1 239 60.7
Glyma.11G111200 Glycine max HOM05D007098 ORTHO05D008793 1.7e-76 291.6 266 55.6
Rhsim08G0182900 Rhododendron simsii HOM05D007098 ORTHO05D008793 2.8e-76 290.8 229 60.7
vmacro19257 Vaccinium macrocarpon HOM05D007098 ORTHO05D008793 3.7e-76 290.4 239 59.0
arahy.Tifrunner.gnm1.ann1.RHK9HC Arachis hypogaea HOM05D007098 ORTHO05D008793 6.3e-76 289.7 280 55.0
Sed0010608 Sechium edule HOM05D007098 ORTHO05D008793 1.4e-75 288.5 271 55.4
arahy.Tifrunner.gnm1.ann1.PW5CDL Arachis hypogaea HOM05D007098 ORTHO05D008793 3.1e-75 287.3 280 54.6
CsaV3_1G009150 Cucumis sativus L. HOM05D007098 ORTHO05D008793 4.1e-75 287.0 269 55.4
PSO063G4104 Papaver somniferum HOM05D007098 ORTHO05D008793 7.0e-75 286.2 276 54.0
PSO782G3618 Papaver somniferum HOM05D007098 ORTHO05D008793 7.0e-75 286.2 277 54.5
SalBow1G0423 Salvia bowleyana HOM05D007098 ORTHO05D008793 9.1e-75 285.8 409 57.5
CDE09G0597 Ceratophyllum demersum HOM05D007098 ORTHO05D008793 1.6e-74 285.0 271 52.8
Lalb_Chr10g0098821 Lupinus albus HOM05D007098 ORTHO05D008793 5.9e-74 283.1 620 70.0
Glyma.02G116500 Glycine max HOM05D007098 ORTHO05D008793 1.0e-73 282.3 262 54.2
HanXRQChr09g0272771 Helianthus annuus HOM05D007098 ORTHO05D008793 1.0e-73 282.3 277 53.4
Psat2g130240 Pisum sativum HOM05D007098 ORTHO05D008793 1.3e-73 282.0 281 52.0
ECA232G2468 Erigeron canadensis HOM05D001195 ORTHO05D001138 3.8e-73 280.4 281 52.3
PGSC0003DMG400015232 Solanum tuberosum HOM05D007098 ORTHO05D008793 5.0e-73 280.0 271 52.8
arahy.Tifrunner.gnm1.ann1.L7HRZC Arachis hypogaea HOM05D007098 ORTHO05D008793 1.5e-72 278.5 280 52.9
Cc04_g10690 Coffea canephora HOM05D007098 ORTHO05D008793 1.5e-72 278.5 271 51.3
Lj5A101T108 Lonicera japonica HOM05D007098 ORTHO05D008793 2.5e-72 277.7 226 60.2
Carub.0008s1032 Capsella rubella HOM05D007098 ORTHO05D008793 1.6e-71 275.0 274 50.7
Migut.D02039 Erythranthe guttata HOM05D007098 ORTHO05D008793 2.1e-71 274.6 276 52.9
Nitab4.5_0006717g0020 Nicotiana tabacum HOM05D007098 ORTHO05D008793 2.1e-71 274.6 270 53.0
Solyc03g111650.4 Solanum lycopersicum HOM05D007098 ORTHO05D008793 4.7e-71 273.5 271 53.5
AT5G50280 Arabidopsis thaliana HOM05D007098 ORTHO05D008793 6.1e-71 273.1 410 65.4
Sopen03g030770 Solanum pennellii HOM05D007098 ORTHO05D008793 6.1e-71 273.1 269 52.8
VMungo1215G0824 Vigna mungo HOM05D007098 ORTHO05D008793 6.1e-71 273.1 261 52.5
THA.LOC104824999 Tarenaya hassleriana HOM05D007098 ORTHO05D008793 3.0e-70 270.8 273 52.4
Nitab4.5_0001360g0150 Nicotiana tabacum HOM05D007098 ORTHO05D008793 4.0e-70 270.4 269 52.4
Lsat_1_v5_gn_4_78280 Lactuca sativa HOM05D007098 ORTHO05D008793 5.2e-70 270.0 278 51.1
CARHR258300 Cardamine hirsuta HOM05D007098 ORTHO05D008793 2.0e-69 268.1 412 64.8
Aa31LG3G5960 Aethionema arabicum HOM05D007098 ORTHO05D008793 1.3e-68 265.4 277 49.5
Phvul.003G042600 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 1.3e-68 265.4 262 51.9
MELO3C002322.2 Cucumis melo HOM05D007098 ORTHO05D008793 1.7e-68 265.0 272 52.2
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 4.8e-68 263.5 276 50.0
AL8G24320 Arabidopsis lyrata HOM05D007098 ORTHO05D008793 1.4e-67 261.9 410 64.4
Thhalv10012796m.g Eutrema salsugineum HOM05D007098 ORTHO05D008793 2.4e-67 261.2 274 48.9
Sp6g12370 Schrenkiella parvula HOM05D007098 ORTHO05D008793 4.1e-67 260.4 411 64.0
Ca_04973_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 5.4e-67 260.0 401 66.3
Medtr5g045490 Medicago truncatula HOM05D007098 ORTHO05D008793 9.1e-67 259.2 266 50.4
TPR.G24468 Trifolium pratense HOM05D007098 ORTHO05D008793 3.5e-66 257.3 270 50.4
BolC3t15668H Brassica oleracea HOM05D007098 ORTHO05D008793 7.7e-66 256.1 407 56.8
A03p27750 Brassica napus HOM05D007098 ORTHO05D008793 5.5e-64 250.0 407 56.0
BcaC01g04822 Brassica carinata HOM05D007098 ORTHO05D008793 1.2e-63 248.8 407 56.3
BraA03t11986Z Brassica rapa HOM05D007098 ORTHO05D008793 4.7e-63 246.9 407 56.0
BcaB01g02904 Brassica carinata HOM05D007098 ORTHO05D008793 6.1e-63 246.5 274 47.4
C03p33470 Brassica napus HOM05D007098 ORTHO05D008793 1.0e-62 245.7 407 56.0
ATR0824G168 Amborella trichopoda HOM05D007098 ORTHO05D008793 4.0e-62 243.8 273 44.7
Eucgr.B00165 Eucalyptus grandis HOM05D007098 ORTHO05D008793 5.4e-59 233.4 294 80.3
SEGI_05165 Sequoiadendron giganteum HOM05D007098 ORTHO05D008793 2.8e-47 194.5 339 59.0
CAN.G472.49 Capsicum annuum HOM05D007098 ORTHO05D008793 2.3e-46 191.4 142 63.4
HPP92_024236 Vanilla planifolia HOM05D007098 ORTHO05D008793 8.9e-46 189.5 159 57.2
Glyma.01G059100 Glycine max HOM05D007098 ORTHO05D008793 3.7e-44 184.1 156 58.3
Os05g0294600 Oryza sativa ssp. japonica HOM05D007098 ORTHO05D008793 3.3e-40 171.0 198 46.0
Ca_26530_v3 Cicer arietinum L. HOM05D005706 ORTHO05D008793 9.5e-32 142.9 100 68.0
Cpa.g.sc4.27 Carica papaya HOM05D006000 ORTHO05D008793 4.0e-30 137.5 125 52.8
Mapoly0023s0082 Marchantia polymorpha HOM05D007098 ORTHO05D008793 9.2e-27 126.3 266 29.3
Ca_30971_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 2.8e-23 114.8 185 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5130 Anthoceros agrestis HOM05D007098 ORTHO05D008793 8.7e-17 93.2 197 27.4
Zm00001eb154110 Zea mays HOM05D007098 ORTHO05D008793 1.3e-12 79.3 83 45.8
Hma1.2p1_0014F.1_g009960 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 9.3e-11 73.2 61 60.7
Duzib084G0201 Durio zibethinus HOM05D007098 ORTHO05D008793 5.1e-09 67.4 65 55.4
DCAR_021600 Daucus carota HOM05D007098 ORTHO05D008793 7.4e-08 63.5 57 56.1
Lj5C101T15 Lonicera japonica HOM05D007098 ORTHO05D008793 2.1e-07 62.0 56 55.4
MBI11_g46065_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 3.6e-07 61.2 52 61.5
arahy.Tifrunner.gnm1.ann1.0Z4KK5 Arachis hypogaea HOM05D007098 ORTHO05D008793 4.8e-07 60.8 61 44.3
Hma1.2p1_1303F.1_g274420 Hydrangea macrophylla HOM05D003056 ORTHO05D003422 8.1e-07 60.1 145 26.9
AUR62023108 Chenopodium quinoa HOM05D004783 ORTHO05D005581 1.8e-06 58.9 147 25.9
Aa31LG8G16030 Aethionema arabicum HOM05D003056 ORTHO05D003422 3.1e-06 58.2 145 23.4
CAN.G996.9 Capsicum annuum HOM05D002479 ORTHO05D002675 3.1e-06 58.2 201 27.9
MD13G1249100 Malus domestica HOM05D003056 ORTHO05D003422 4.0e-06 57.8 145 26.2
AL3G52990 Arabidopsis lyrata HOM05D003056 ORTHO05D003422 6.9e-06 57.0 152 25.0
Haze_09312 Corylus avellana HOM05D002453 ORTHO05D008746 6.9e-06 57.0 122 27.9
Oeu062248.1 Olea europaea HOM05D004783 ORTHO05D005581 6.9e-06 57.0 165 26.1
Peaxi162Scf00007g00285 Petunia axillaris HOM05D002479 ORTHO05D002675 6.9e-06 57.0 198 27.8
CDE07G1469 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 9.0e-06 56.6 145 24.1


User provided reference genes

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