Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20294 Selenicereus undatus HOM05D001023 ORTHO05D381746 2.4e-46 188.3 88 100.0
Hund22790 Selenicereus undatus HOM05D001023 ORTHO05D380504 5.3e-25 117.5 61 86.9
A09p33520 Brassica napus HOM05D001023 ORTHO05D000912 1.0e-07 60.1 39 64.1
BraA09t38893Z Brassica rapa HOM05D001023 ORTHO05D000912 1.0e-07 60.1 39 64.1
C05p32310 Brassica napus HOM05D001023 ORTHO05D000912 3.8e-07 58.2 39 61.5
BolC5t31963H Brassica oleracea HOM05D001023 ORTHO05D000912 3.8e-07 58.2 39 61.5
Lj1g0013475 Lotus japonicus HOM05D001023 ORTHO05D000912 1.1e-06 56.6 36 69.4
BcaB04g17971 Brassica carinata HOM05D009885 ORTHO05D015988 1.4e-06 56.2 38 63.2
Ah.07g198220 Amaranthus hybridus HOM05D001023 ORTHO05D000912 1.9e-06 55.8 46 54.3
CiPaw.11G110600 Carya illinoinensis HOM05D001023 ORTHO05D000912 1.9e-06 55.8 39 64.1
Thhalv10008028m.g Eutrema salsugineum HOM05D001023 ORTHO05D000912 1.9e-06 55.8 39 64.1
SHI02293 Sapria himalayana HOM05D001023 ORTHO05D000912 2.5e-06 55.5 36 63.9
TWI15G1139 Tripterygium wilfordii HOM05D001023 ORTHO05D000912 2.5e-06 55.5 39 66.7
Aa31LG6G7460 Aethionema arabicum HOM05D001023 ORTHO05D000912 3.2e-06 55.1 35 65.7
AL1G47100 Arabidopsis lyrata HOM05D001023 ORTHO05D000912 3.2e-06 55.1 35 65.7
AT1G32790 Arabidopsis thaliana HOM05D001023 ORTHO05D000912 3.2e-06 55.1 35 65.7
BcaC05g27310 Brassica carinata HOM05D001023 ORTHO05D000912 3.2e-06 55.1 35 65.7
CARHR032170 Cardamine hirsuta HOM05D001023 ORTHO05D000912 3.2e-06 55.1 35 65.7
Cfa016170 Carpinus fangiana HOM05D001023 ORTHO05D000912 3.2e-06 55.1 39 69.2
Ca_16770_v3 Cicer arietinum L. HOM05D001023 ORTHO05D000912 3.2e-06 55.1 46 60.9
Haze_00284 Corylus avellana HOM05D001023 ORTHO05D000912 3.2e-06 55.1 39 69.2
Eucgr.E01065 Eucalyptus grandis HOM05D001023 ORTHO05D000912 3.2e-06 55.1 35 65.7
Glyma.06G135200 Glycine max HOM05D001023 ORTHO05D000912 3.2e-06 55.1 39 69.2
Sp1g28170 Schrenkiella parvula HOM05D001023 ORTHO05D000912 3.2e-06 55.1 35 65.7
Aa31LG4G17940 Aethionema arabicum HOM05D001023 ORTHO05D000912 4.2e-06 54.7 44 61.4
Eucgr.K00426 Eucalyptus grandis HOM05D001023 ORTHO05D000912 4.2e-06 54.7 41 63.4
Lj1g0000227 Lotus japonicus HOM05D001023 ORTHO05D000912 4.2e-06 54.7 39 66.7
Lj1g0000769 Lotus japonicus HOM05D001023 ORTHO05D000912 4.2e-06 54.7 39 66.7
Lalb_Chr11g0067341 Lupinus albus HOM05D001023 ORTHO05D000912 4.2e-06 54.7 39 66.7
Lalb_Chr23g0271881 Lupinus albus HOM05D001023 ORTHO05D000912 4.2e-06 54.7 39 66.7
Sc19g0000630 Simmondsia chinensis HOM05D001023 ORTHO05D000912 4.2e-06 54.7 39 66.7
FvH4_7g32841 Fragaria vesca HOM05D001023 ORTHO05D000912 5.5e-06 54.3 39 64.1
FAN01G1264 Fragaria x ananassa HOM05D001023 ORTHO05D000912 5.5e-06 54.3 39 64.1
FAN03G0383 Fragaria x ananassa HOM05D001023 ORTHO05D000912 5.5e-06 54.3 39 64.1
FAN10G0213 Fragaria x ananassa HOM05D001023 ORTHO05D000912 5.5e-06 54.3 39 64.1
FAN10G1132 Fragaria x ananassa HOM05D001023 ORTHO05D000912 5.5e-06 54.3 39 64.1
RcHm_v2.0_Chr1g0382781 Rosa chinensis HOM05D001023 ORTHO05D000912 5.5e-06 54.3 39 64.1
arahy.Tifrunner.gnm1.ann1.VP5HLN Arachis hypogaea HOM05D001023 ORTHO05D000912 7.2e-06 53.9 39 66.7
arahy.Tifrunner.gnm1.ann1.XW5FLG Arachis hypogaea HOM05D001023 ORTHO05D000912 7.2e-06 53.9 39 66.7
Carub.0001s3112 Capsella rubella HOM05D001023 ORTHO05D000912 7.2e-06 53.9 35 62.9
Zm00001eb422460 Zea mays HOM05D001023 ORTHO05D000912 7.2e-06 53.9 40 62.5
BcaB01g01491 Brassica carinata HOM05D001023 ORTHO05D000912 9.4e-06 53.5 35 65.7
ClCG07G017440 Citrullus lanatus HOM05D001023 ORTHO05D000912 9.4e-06 53.5 46 54.3
MELO3C024854.2 Cucumis melo HOM05D001023 ORTHO05D000912 9.4e-06 53.5 46 54.3
CsaV3_4G008520 Cucumis sativus L. HOM05D001023 ORTHO05D000912 9.4e-06 53.5 46 54.3
Glyma.04G229500 Glycine max HOM05D001023 ORTHO05D000912 9.4e-06 53.5 39 64.1
Medtr3g092510 Medicago truncatula HOM05D001023 ORTHO05D000912 9.4e-06 53.5 36 72.2
Medtr3g092550 Medicago truncatula HOM05D001023 ORTHO05D000912 9.4e-06 53.5 39 64.1
Peaxi162Scf00300g00849 Petunia axillaris HOM05D001023 ORTHO05D000912 9.4e-06 53.5 29 69.0
Psat5g072840 Pisum sativum HOM05D001023 ORTHO05D000912 9.4e-06 53.5 36 72.2
PGR042G2208 Punica granatum HOM05D001023 ORTHO05D000912 9.4e-06 53.5 41 63.4
Sed0026199 Sechium edule HOM05D001023 ORTHO05D000912 9.4e-06 53.5 46 54.3
THA.LOC104813062 Tarenaya hassleriana HOM05D001023 ORTHO05D000912 9.4e-06 53.5 35 65.7
unitig_0.g2016 Utricularia gibba HOM05D001023 ORTHO05D000912 9.4e-06 53.5 28 75.0
Zm00001eb173820 Zea mays HOM05D001023 ORTHO05D000912 9.4e-06 53.5 39 64.1
Zm00001eb236660 Zea mays HOM05D001023 ORTHO05D000912 9.4e-06 53.5 39 64.1
Zm00001eb260870 Zea mays HOM05D001023 ORTHO05D000912 9.4e-06 53.5 39 64.1
Zm00001eb281070 Zea mays HOM05D001023 ORTHO05D000912 9.4e-06 53.5 39 64.1
Zm00001eb383540 Zea mays HOM05D001023 ORTHO05D000912 9.4e-06 53.5 39 64.1


User provided reference genes

Program Settings