Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 3.9e-182 641.3 323 100.0
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 4.0e-94 349.0 218 77.5
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 5.5e-88 328.6 259 68.7
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 8.9e-86 321.2 240 69.2
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 1.7e-84 317.0 248 69.0
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 4.1e-83 312.4 246 67.9
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 5.4e-83 312.0 218 71.1
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 3.5e-82 309.3 218 72.9
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 7.8e-82 308.1 248 67.3
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 7.8e-82 308.1 236 66.1
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 7.8e-82 308.1 218 71.6
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 1.3e-81 307.4 260 65.0
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 2.3e-81 306.6 259 61.0
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 2.9e-81 306.2 255 62.0
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 2.9e-81 306.2 255 62.0
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 2.9e-81 306.2 236 65.7
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 6.6e-81 305.1 220 70.5
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 6.6e-81 305.1 247 64.4
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 8.6e-81 304.7 279 59.9
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 8.6e-81 304.7 217 70.5
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 1.5e-80 303.9 273 59.7
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.3e-80 302.8 273 60.1
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 4.3e-80 302.4 195 74.9
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 5.6e-80 302.0 264 59.8
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 7.3e-80 301.6 251 63.3
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 9.5e-80 301.2 268 61.9
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 9.5e-80 301.2 218 69.3
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 1.2e-79 300.8 265 61.5
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 1.6e-79 300.4 197 75.6
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.6e-79 300.4 217 69.6
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.1e-79 300.1 218 67.9
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.1e-79 300.1 218 67.9
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 2.8e-79 299.7 218 70.2
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 8.0e-79 298.1 218 69.3
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 8.0e-79 298.1 272 59.9
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 8.0e-79 298.1 242 65.7
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 8.0e-79 298.1 281 60.5
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 1.0e-78 297.7 205 71.2
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 1.4e-78 297.4 295 58.3
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 1.4e-78 297.4 223 69.1
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 1.8e-78 297.0 266 58.3
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 1.8e-78 297.0 218 68.8
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 2.3e-78 296.6 250 60.4
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 2.3e-78 296.6 260 61.9
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 5.2e-78 295.4 245 63.3
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 5.2e-78 295.4 263 61.6
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 6.8e-78 295.0 214 68.7
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 6.8e-78 295.0 227 65.6
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 1.5e-77 293.9 241 63.9
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 2.0e-77 293.5 241 63.1
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 2.0e-77 293.5 201 73.1
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 2.6e-77 293.1 246 62.2
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 3.4e-77 292.7 218 69.3
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 4.4e-77 292.4 243 65.0
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 5.7e-77 292.0 226 67.7
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 7.5e-77 291.6 215 68.8
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 7.5e-77 291.6 200 71.0
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 7.5e-77 291.6 196 73.5
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.3e-76 290.8 224 65.6
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.3e-76 290.8 215 68.8
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 2.2e-76 290.0 253 61.7
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 2.2e-76 290.0 263 59.7
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 2.9e-76 289.7 227 68.3
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 6.4e-76 288.5 259 61.8
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 1.1e-75 287.7 238 63.0
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 1.4e-75 287.3 200 72.5
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 4.1e-75 285.8 198 70.7
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 4.1e-75 285.8 258 60.9
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 9.2e-75 284.6 234 63.2
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 1.2e-74 284.3 219 64.8
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 1.6e-74 283.9 226 65.0
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 4.6e-74 282.3 186 72.6
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 7.8e-74 281.6 229 64.2
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 1.0e-73 281.2 235 63.0
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.3e-73 280.8 187 72.2
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.7e-73 280.4 214 64.5
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 5.0e-73 278.9 193 71.5
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 1.9e-72 276.9 224 63.4
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 3.3e-72 276.2 185 72.4
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 4.3e-72 275.8 192 68.2
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.2e-71 274.2 222 65.3
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 4.7e-71 272.3 223 62.8
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 6.0e-66 255.4 227 60.8
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 1.3e-65 254.2 197 66.0
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 1.7e-65 253.8 224 61.6
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 3.9e-65 252.7 215 58.1
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 1.1e-62 244.6 310 47.7
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 1.8e-62 243.8 158 72.2
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.1e-59 234.6 207 58.9
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 3.9e-57 226.1 173 62.4
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 6.6e-57 225.3 169 63.9
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 3.6e-55 219.5 173 60.7
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 4.7e-55 219.2 234 52.1
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.5e-53 214.2 168 61.3
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 9.9e-53 211.5 247 48.6
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 1.7e-52 210.7 137 70.1
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 3.2e-51 206.5 173 59.0
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 7.1e-51 205.3 182 60.4
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 2.4e-46 190.3 112 78.6
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 9.9e-45 184.9 200 52.0
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 4.9e-44 182.6 110 79.1
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 1.1e-43 181.4 172 57.0
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 8.1e-39 165.2 170 50.6
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.4e-38 164.5 186 54.3
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 5.3e-38 162.5 107 69.2
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 5.3e-38 162.5 107 69.2
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 6.9e-38 162.2 180 53.9
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 6.9e-38 162.2 174 51.1
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 7.6e-37 158.7 121 69.4
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 1.3e-36 157.9 93 80.6
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 6.4e-36 155.6 160 57.5
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 9.3e-35 151.8 106 67.9
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.5e-32 143.7 93 71.0
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 3.7e-31 139.8 93 73.1
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 1.1e-30 138.3 107 66.4
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 4.5e-29 132.9 92 71.7
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 1.6e-23 114.4 88 67.0
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.1e-19 101.7 74 66.2
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 7.9e-18 95.5 184 36.4
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.0e-17 95.1 169 42.0


User provided reference genes

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