Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19013 Selenicereus undatus HOM05D003431 ORTHO05D380568 1.1e-164 583.2 285 100.0
Cc02_g22270 Coffea canephora HOM05D003431 ORTHO05D005152 5.0e-08 62.8 125 37.6
VMungo0540G2199 Vigna mungo HOM05D003431 ORTHO05D005152 6.5e-08 62.4 125 36.8
FAN04G1904 Fragaria x ananassa HOM05D003431 ORTHO05D005152 1.1e-07 61.6 125 36.0
Glyma.15G048200 Glycine max HOM05D003431 ORTHO05D005152 1.1e-07 61.6 125 36.8
Oeu026055.1 Olea europaea HOM05D003431 ORTHO05D005152 1.5e-07 61.2 125 39.2
Dinv24261 Davidia involucrata HOM05D003431 ORTHO05D005152 1.9e-07 60.8 125 34.4
Nn2g13208 Nelumbo nucifera HOM05D003431 ORTHO05D005152 1.9e-07 60.8 125 34.4
FvH4_5g30060 Fragaria vesca HOM05D003431 ORTHO05D005152 2.5e-07 60.5 125 35.2
FAN08G2387 Fragaria x ananassa HOM05D003431 ORTHO05D005152 2.5e-07 60.5 125 35.2
FAN13G1098 Fragaria x ananassa HOM05D003431 ORTHO05D005152 2.5e-07 60.5 125 35.2
FAN18G1423 Fragaria x ananassa HOM05D003431 ORTHO05D005152 2.5e-07 60.5 125 35.2
SalBow6G0908 Salvia bowleyana HOM05D003431 ORTHO05D005152 2.5e-07 60.5 125 36.0
TPR.G39937 Trifolium pratense HOM05D003431 ORTHO05D005152 2.5e-07 60.5 125 36.8
Manes.07G013300 Manihot esculenta HOM05D003431 ORTHO05D005152 3.2e-07 60.1 125 35.2
Nitab4.5_0010140g0020 Nicotiana tabacum HOM05D003431 ORTHO05D005152 3.2e-07 60.1 128 36.7
RcHm_v2.0_Chr7g0224251 Rosa chinensis HOM05D003431 ORTHO05D005152 3.2e-07 60.1 125 35.2
CSS0006665 Camellia sinensis var. sinensis HOM05D003431 ORTHO05D005152 4.2e-07 59.7 125 35.2
MD08G1225200 Malus domestica HOM05D003431 ORTHO05D005152 5.5e-07 59.3 125 34.4
Manes.10G132200 Manihot esculenta HOM05D003431 ORTHO05D005152 5.5e-07 59.3 125 34.4
Oeu000195.1 Olea europaea HOM05D003431 ORTHO05D005152 5.5e-07 59.3 125 36.0
Potri.001G460100 Populus trichocarpa HOM05D003431 ORTHO05D005152 5.5e-07 59.3 128 35.2
Phvul.006G212200 Phaseolus vulgaris HOM05D003431 ORTHO05D005152 9.4e-07 58.5 125 35.2
CAN.G1352.24 Capsicum annuum HOM05D003431 ORTHO05D005152 1.2e-06 58.2 142 33.8
Glyma.08G184300 Glycine max HOM05D003431 ORTHO05D005152 1.2e-06 58.2 125 34.4
Potri.011G156300 Populus trichocarpa HOM05D003431 ORTHO05D005152 1.2e-06 58.2 128 35.2
Sabra11G0143500 Salix brachista HOM05D003431 ORTHO05D005152 1.2e-06 58.2 130 35.4
Actinidia39056 Actinidia chinensis HOM05D003431 ORTHO05D005152 1.6e-06 57.8 125 34.4
CiPaw.06G149000 Carya illinoinensis HOM05D003431 ORTHO05D005152 1.6e-06 57.8 125 35.2
AUR62020868 Chenopodium quinoa HOM05D003431 ORTHO05D005152 1.6e-06 57.8 125 32.0
Medtr2g007780 Medicago truncatula HOM05D003431 ORTHO05D005152 1.6e-06 57.8 125 34.4
AUR62018551 Chenopodium quinoa HOM05D003431 ORTHO05D005152 2.1e-06 57.4 125 32.0
Prupe.1G562900 Prunus persica HOM05D003431 ORTHO05D005152 2.1e-06 57.4 125 33.6
QL02p098641 Quercus lobata HOM05D003431 ORTHO05D005152 2.7e-06 57.0 125 33.6
arahy.Tifrunner.gnm1.ann1.N8P1ZJ Arachis hypogaea HOM05D003431 ORTHO05D005152 3.6e-06 56.6 125 34.4
EL10Ac3g07449 Beta vulgaris HOM05D003431 ORTHO05D005152 3.6e-06 56.6 125 32.8
MD15G1418800 Malus domestica HOM05D003431 ORTHO05D005152 3.6e-06 56.6 125 32.8
GSVIVG01023018001 Vitis vinifera HOM05D003431 ORTHO05D005152 3.6e-06 56.6 125 34.4
arahy.Tifrunner.gnm1.ann1.I5HCXG Arachis hypogaea HOM05D003431 ORTHO05D005152 4.7e-06 56.2 125 33.6
MSTRG.16533 Avicennia marina HOM05D003431 ORTHO05D005152 4.7e-06 56.2 123 35.8
Hund24426 Selenicereus undatus HOM05D003431 ORTHO05D005152 4.7e-06 56.2 125 36.8
Thecc.02G041300 Theobroma cacao HOM05D003431 ORTHO05D005152 4.7e-06 56.2 125 33.6
Aqoxy4G02442 Aquilegia oxysepala HOM05D003431 ORTHO05D005152 6.1e-06 55.8 125 32.8
Ca_00090_v3 Cicer arietinum L. HOM05D003431 ORTHO05D005152 6.1e-06 55.8 125 33.6
Ca_29929_v3 Cicer arietinum L. HOM05D003431 ORTHO05D005152 6.1e-06 55.8 125 33.6
Sabra16G0311800 Salix brachista HOM05D003431 ORTHO05D005152 6.1e-06 55.8 123 34.1
Solyc01g104470.3 Solanum lycopersicum HOM05D003431 ORTHO05D005152 6.1e-06 55.8 125 34.4
PGSC0003DMG400023745 Solanum tuberosum HOM05D003431 ORTHO05D005152 6.1e-06 55.8 125 34.4
TAR636G0765 Trochodendron aralioides HOM05D003431 ORTHO05D005152 6.1e-06 55.8 125 32.8
Atru.chr6.1030 Acer truncatum HOM05D003431 ORTHO05D005152 8.0e-06 55.5 125 35.2
PGR142G4046 Punica granatum HOM05D003431 ORTHO05D005152 8.0e-06 55.5 125 35.2
unitig_22.g6119 Utricularia gibba HOM05D003431 ORTHO05D005152 8.0e-06 55.5 123 34.1


User provided reference genes

Program Settings