Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19012 Selenicereus undatus HOM05D004799 ORTHO05D005500 6.7e-115 417.5 239 100.0
EL10Ac3g07450 Beta vulgaris HOM05D004799 ORTHO05D005500 2.8e-68 262.7 239 64.4
AUR62018552 Chenopodium quinoa HOM05D004799 ORTHO05D005500 2.2e-65 253.1 238 64.3
Ah.04g149450 Amaranthus hybridus HOM05D004799 ORTHO05D005500 6.4e-65 251.5 239 62.8
AUR62020867 Chenopodium quinoa HOM05D004799 ORTHO05D005500 2.4e-64 249.6 238 63.0
Sc14g0006850 Simmondsia chinensis HOM05D004799 ORTHO05D005500 7.8e-63 244.6 226 63.7
Haze_01626 Corylus avellana HOM05D004799 ORTHO05D005500 1.2e-58 230.7 238 58.4
Cfa005544 Carpinus fangiana HOM05D004799 ORTHO05D005500 2.6e-58 229.6 239 59.8
MD08G1225100 Malus domestica HOM05D004799 ORTHO05D005500 3.4e-58 229.2 237 57.0
Dinv19352 Davidia involucrata HOM05D004799 ORTHO05D005500 9.9e-58 227.6 239 59.4
Gohir.A03G210900 Gossypium hirsutum HOM05D004799 ORTHO05D005500 2.2e-57 226.5 232 56.9
GSVIVG01023017001 Vitis vinifera HOM05D004799 ORTHO05D005500 2.4e-56 223.0 238 58.0
Gohir.D01G167800 Gossypium hirsutum HOM05D004799 ORTHO05D005500 1.6e-55 220.3 231 57.1
MD15G1418700 Malus domestica HOM05D004799 ORTHO05D005500 1.6e-55 220.3 237 57.0
Gohir.A01G177000 Gossypium hirsutum HOM05D004799 ORTHO05D005500 2.1e-55 219.9 232 56.9
Gorai.002G208500 Gossypium raimondii HOM05D004799 ORTHO05D005500 2.1e-55 219.9 231 57.1
Dinv24262 Davidia involucrata HOM05D004799 ORTHO05D005500 2.7e-55 219.5 231 61.9
Duzib132G0636 Durio zibethinus HOM05D004799 ORTHO05D005500 3.5e-55 219.2 228 58.3
FvH4_5g30080 Fragaria vesca HOM05D004799 ORTHO05D005500 4.6e-55 218.8 228 57.0
FAN04G2475 Fragaria x ananassa HOM05D004799 ORTHO05D005500 7.8e-55 218.0 228 56.6
Cc02_g22290 Coffea canephora HOM05D004799 ORTHO05D005500 1.0e-54 217.6 228 59.2
Duzib248G0546 Durio zibethinus HOM05D004799 ORTHO05D005500 1.3e-54 217.2 234 57.3
PGSC0003DMG400023776 Solanum tuberosum HOM05D004799 ORTHO05D005500 3.9e-54 215.7 240 57.9
FAN13G3307 Fragaria x ananassa HOM05D004799 ORTHO05D005500 5.1e-54 215.3 228 56.6
Sopen01g046960 Solanum pennellii HOM05D004799 ORTHO05D005500 8.6e-54 214.5 240 57.9
Gohir.D02G232500 Gossypium hirsutum HOM05D004799 ORTHO05D005500 1.9e-53 213.4 238 55.0
Gorai.005G260300 Gossypium raimondii HOM05D004799 ORTHO05D005500 5.6e-53 211.8 238 54.6
FAN18G4597 Fragaria x ananassa HOM05D004799 ORTHO05D005500 9.5e-53 211.1 237 54.9
CiPaw.06G148900 Carya illinoinensis HOM05D004799 ORTHO05D005500 1.6e-52 210.3 241 55.2
QL02p098623 Quercus lobata HOM05D004799 ORTHO05D005500 2.1e-52 209.9 266 52.6
RcHm_v2.0_Chr7g0224271 Rosa chinensis HOM05D004799 ORTHO05D005500 2.8e-52 209.5 232 56.0
Lj5A248T74 Lonicera japonica HOM05D004799 ORTHO05D005500 3.6e-52 209.1 233 58.8
Manes.10G132000 Manihot esculenta HOM05D004799 ORTHO05D005500 3.6e-52 209.1 230 56.1
Cpa.g.sc2.26 Carica papaya HOM05D004799 ORTHO05D005500 6.2e-52 208.4 234 55.6
Hma1.2p1_0217F.1_g091930 Hydrangea macrophylla HOM05D004799 ORTHO05D005500 1.4e-51 207.2 240 55.8
Manes.07G013800 Manihot esculenta HOM05D004799 ORTHO05D005500 2.4e-51 206.5 235 53.6
MSTRG.27841 Avicennia marina HOM05D004799 ORTHO05D005500 6.8e-51 204.9 239 54.8
Potri.001G209100 Populus trichocarpa HOM05D004799 ORTHO05D005500 2.0e-50 203.4 222 57.2
Sabra01G0161300 Salix brachista HOM05D004799 ORTHO05D005500 2.0e-50 203.4 259 52.5
Peaxi162Scf00011g00139 Petunia axillaris HOM05D004799 ORTHO05D005500 2.2e-49 199.9 232 57.3
Lalb_Chr07g0185691 Lupinus albus HOM05D004799 ORTHO05D005500 2.9e-49 199.5 232 54.7
Sabra03G0013400 Salix brachista HOM05D004799 ORTHO05D005500 4.9e-49 198.7 215 54.9
CiPaw.05G042800 Carya illinoinensis HOM05D004799 ORTHO05D005500 8.4e-49 198.0 280 49.6
Ciclev10002345m.g Citrus clementina HOM05D004799 ORTHO05D005500 8.4e-49 198.0 239 55.2
Migut.B00668 Erythranthe guttata HOM05D004799 ORTHO05D005500 8.4e-49 198.0 233 53.2
Eucgr.I02711 Eucalyptus grandis HOM05D004799 ORTHO05D005500 1.1e-48 197.6 235 52.3
Potri.003G021500 Populus trichocarpa HOM05D004799 ORTHO05D005500 1.1e-48 197.6 222 54.5
arahy.Tifrunner.gnm1.ann1.ZS42GJ Arachis hypogaea HOM05D004799 ORTHO05D005500 1.4e-48 197.2 223 51.6
Lsat_1_v5_gn_9_116381 Lactuca sativa HOM05D004799 ORTHO05D005500 1.9e-48 196.8 222 55.4
arahy.Tifrunner.gnm1.ann1.BG3XJE Arachis hypogaea HOM05D004799 ORTHO05D005500 2.4e-48 196.4 223 51.6
SGA_v2.0_scaffold110G31288 Striga asiatica HOM05D004799 ORTHO05D005500 1.2e-47 194.1 243 51.9
TAR376G0767 Trochodendron aralioides HOM05D004799 ORTHO05D005500 1.6e-47 193.7 236 52.5
THA.LOC104809537 Tarenaya hassleriana HOM05D004799 ORTHO05D005500 3.5e-47 192.6 224 53.1
Oeu008877.2 Olea europaea HOM05D004799 ORTHO05D005500 4.6e-47 192.2 257 51.8
TAR628G0692 Trochodendron aralioides HOM05D004799 ORTHO05D005500 4.6e-47 192.2 241 52.7
Lalb_Chr12g0204381 Lupinus albus HOM05D004799 ORTHO05D005500 7.8e-47 191.4 235 53.6
CAN.G1352.25 Capsicum annuum HOM05D004799 ORTHO05D005500 2.3e-46 189.9 240 53.3
DCAR_005625 Daucus carota HOM05D004799 ORTHO05D005500 1.1e-45 187.6 226 51.8
CANSAT11G1940 Cannabis sativa HOM05D004799 ORTHO05D005500 1.9e-45 186.8 241 54.4
ClCG09G016220 Citrullus lanatus HOM05D004799 ORTHO05D005500 1.9e-45 186.8 221 53.8
MELO3C018586.2 Cucumis melo HOM05D004799 ORTHO05D005500 5.6e-45 185.3 237 51.5
CsaV3_7G007080 Cucumis sativus L. HOM05D004799 ORTHO05D005500 5.6e-45 185.3 236 50.8
Oeu012743.2 Olea europaea HOM05D004799 ORTHO05D005500 1.2e-44 184.1 244 50.4
Thecc.02G041200 Theobroma cacao HOM05D004799 ORTHO05D005500 1.6e-44 183.7 233 51.1
FAN08G0327 Fragaria x ananassa HOM05D004799 ORTHO05D005500 2.1e-44 183.3 228 50.4
Nitab4.5_0010140g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 2.1e-44 183.3 228 52.2
HanXRQChr03g0066881 Helianthus annuus HOM05D004799 ORTHO05D005500 2.8e-44 183.0 232 50.4
Medtr2g007770 Medicago truncatula HOM05D004799 ORTHO05D005500 3.6e-44 182.6 216 52.3
TWI59G1038 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 3.6e-44 182.6 220 55.0
CsaV3_5G024750 Cucumis sativus L. HOM05D004799 ORTHO05D005500 1.1e-43 181.0 220 52.7
Glyma.08G128300 Glycine max HOM05D004799 ORTHO05D005500 2.4e-43 179.9 220 53.6
Aqoxy6G00151 Aquilegia oxysepala HOM05D004799 ORTHO05D005500 4.0e-43 179.1 225 50.7
Carub.0001s1103 Capsella rubella HOM05D004799 ORTHO05D005500 4.0e-43 179.1 238 51.7
TWI23G0644 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 4.0e-43 179.1 241 53.5
Aa31LG1G3310 Aethionema arabicum HOM05D004799 ORTHO05D005500 5.2e-43 178.7 234 51.7
TPR.G2141 Trifolium pratense HOM05D004799 ORTHO05D005500 6.9e-43 178.3 213 51.6
vmacro01776 Vaccinium macrocarpon HOM05D004799 ORTHO05D005500 9.0e-43 177.9 264 47.0
Sp1g10030 Schrenkiella parvula HOM05D004799 ORTHO05D005500 1.2e-42 177.6 228 50.9
ATR0684G092 Amborella trichopoda HOM05D004799 ORTHO05D005500 1.5e-42 177.2 218 51.8
Lj6g0003329 Lotus japonicus HOM05D004799 ORTHO05D005500 3.4e-42 176.0 222 50.9
BraA08t35264Z Brassica rapa HOM05D004799 ORTHO05D005500 1.7e-41 173.7 228 50.9
A08p33480 Brassica napus HOM05D004799 ORTHO05D005500 2.9e-41 172.9 228 50.4
VMungo0251G3647 Vigna mungo HOM05D004799 ORTHO05D005500 4.9e-41 172.2 220 50.0
Atru.chr6.1081 Acer truncatum HOM05D004799 ORTHO05D005500 6.4e-41 171.8 203 54.7
unitig_26.g9556 Utricularia gibba HOM05D004799 ORTHO05D005500 1.4e-40 170.6 238 51.7
AL1G22490 Arabidopsis lyrata HOM05D004799 ORTHO05D005500 3.2e-40 169.5 229 51.5
CARHR011640 Cardamine hirsuta HOM05D004799 ORTHO05D005500 4.2e-40 169.1 234 50.9
Actinidia39055 Actinidia chinensis HOM05D004799 ORTHO05D005500 5.4e-40 168.7 193 57.5
Actinidia00218 Actinidia chinensis HOM05D004799 ORTHO05D005500 7.1e-40 168.3 234 51.3
COL.COLO4_17895 Corchorus olitorius HOM05D004799 ORTHO05D005500 9.3e-40 167.9 232 50.0
C08p14470 Brassica napus HOM05D004799 ORTHO05D005500 1.2e-39 167.5 228 49.6
Psat1g220000 Pisum sativum HOM05D004799 ORTHO05D005500 2.7e-39 166.4 213 49.3
BcaB03g13259 Brassica carinata HOM05D004799 ORTHO05D005500 3.5e-39 166.0 226 48.7
Lsat_1_v5_gn_7_77960 Lactuca sativa HOM05D004799 ORTHO05D005500 3.5e-39 166.0 231 47.6
BcaC07g38663 Brassica carinata HOM05D004799 ORTHO05D005500 4.6e-39 165.6 228 49.1
BolC8t49096H Brassica oleracea HOM05D004799 ORTHO05D005500 4.6e-39 165.6 228 49.1
A06p08020 Brassica napus HOM05D004799 ORTHO05D005500 6.0e-39 165.2 230 51.7
BraA06t24001Z Brassica rapa HOM05D004799 ORTHO05D005500 6.0e-39 165.2 230 51.7
Glyma.05G170200 Glycine max HOM05D004799 ORTHO05D005500 1.0e-38 164.5 222 51.8
Os03g0262100 Oryza sativa ssp. japonica HOM05D004799 ORTHO05D005500 1.3e-38 164.1 236 47.9
CSS0024882 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.7e-38 163.7 191 55.0
CSS0037217 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.7e-38 163.7 191 55.0
Zm00001eb011470 Zea mays HOM05D004799 ORTHO05D005500 2.3e-38 163.3 208 51.9
AT1G11400 Arabidopsis thaliana HOM05D004799 ORTHO05D005500 3.0e-38 162.9 213 53.1
BcaC05g25015 Brassica carinata HOM05D004799 ORTHO05D005500 3.0e-38 162.9 230 52.6
C05p09620 Brassica napus HOM05D004799 ORTHO05D005500 3.0e-38 162.9 230 52.6
BolC5t29704H Brassica oleracea HOM05D004799 ORTHO05D005500 3.0e-38 162.9 230 52.6
Rhsim11G0131600 Rhododendron simsii HOM05D004799 ORTHO05D005500 5.1e-38 162.2 330 40.3
Nitab4.5_0005539g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 1.9e-37 160.2 228 47.8
Phvul.002G251000 Phaseolus vulgaris HOM05D004799 ORTHO05D005500 2.8e-36 156.4 224 46.4
Sed0004816 Sechium edule HOM05D004799 ORTHO05D005500 1.1e-35 154.5 235 48.1
Thhalv10008698m.g Eutrema salsugineum HOM05D004799 ORTHO05D005500 1.4e-35 154.1 229 49.3
HPP92_019221 Vanilla planifolia HOM05D004799 ORTHO05D005500 4.0e-35 152.5 231 46.8
Ca_00089_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 1.5e-34 150.6 266 41.0
Ca_29928_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 1.5e-34 150.6 266 41.0
SalBow6G1776 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.7e-33 147.1 227 49.8
SalBow6G5744 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.7e-33 147.1 227 49.8
CDE02G4357 Ceratophyllum demersum HOM05D004799 ORTHO05D005500 3.8e-33 146.0 217 46.1
Nn5g28066 Nelumbo nucifera HOM05D004799 ORTHO05D005500 8.4e-33 144.8 193 48.7
PSO528G0257 Papaver somniferum HOM05D004799 ORTHO05D005500 3.2e-32 142.9 234 44.4
Ah.13g077920 Amaranthus hybridus HOM05D004799 ORTHO05D005500 1.0e-30 137.9 238 44.5
ECA240G2283 Erigeron canadensis HOM05D004799 ORTHO05D005500 1.0e-30 137.9 215 46.5
PSO170G0171 Papaver somniferum HOM05D004799 ORTHO05D005500 3.1e-27 126.3 232 42.7
HPP92_009361 Vanilla planifolia HOM05D004799 ORTHO05D005500 2.6e-26 123.2 218 40.8
Mapoly0065s0027 Marchantia polymorpha HOM05D004799 ORTHO05D005500 9.9e-26 121.3 215 44.7
Prupe.1G562800 Prunus persica HOM05D004799 ORTHO05D005500 1.7e-25 120.6 167 49.7
Nn1g08619 Nelumbo nucifera HOM05D004799 ORTHO05D005500 1.9e-24 117.1 171 47.4
CBR_g22015 Chara braunii HOM05D004799 ORTHO05D005500 2.7e-23 113.2 247 36.8
MBI03_g11149_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 4.6e-23 112.5 314 35.0
SEGI_10500 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 8.7e-22 108.2 84 70.2
MSTRG.16532 Avicennia marina HOM05D004799 ORTHO05D005500 2.1e-20 103.6 162 51.9
Glyma.14G170300 Glycine max HOM05D004799 ORTHO05D005500 8.2e-20 101.7 155 47.7
Atru.chr6.1045 Acer truncatum HOM05D004799 ORTHO05D005500 2.2e-17 93.6 124 50.8
Zm00001eb398170 Zea mays HOM05D004799 ORTHO05D005500 1.0e-14 84.7 161 41.6
AagrBONN_evm.TU.Sc2ySwM_344.2060 Anthoceros agrestis HOM05D004799 ORTHO05D005500 3.0e-14 83.2 84 61.9
Lj9C308T7 Lonicera japonica HOM05D004799 ORTHO05D005500 1.1e-13 81.3 144 43.8
MBI03_g11127_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 7.4e-13 78.6 125 48.0
GSVIVG01013911001 Vitis vinifera HOM05D004799 ORTHO05D005500 7.4e-13 78.6 85 56.5
Ah.13g066130 Amaranthus hybridus HOM05D004799 ORTHO05D005500 4.1e-11 72.8 65 64.6
SMO367G0479 Selaginella moellendorffii HOM05D004799 ORTHO05D005500 1.3e-09 67.8 48 72.9
arahy.Tifrunner.gnm1.ann1.DUW5WJ Arachis hypogaea HOM05D004799 ORTHO05D005500 2.1e-07 60.5 82 48.8


User provided reference genes

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