Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18943 Selenicereus undatus HOM05D007197 ORTHO05D009064 1.6e-146 522.7 265 100.0
EL10Ac7g15954 Beta vulgaris HOM05D007197 ORTHO05D009064 1.3e-95 353.6 280 67.9
AUR62041290 Chenopodium quinoa HOM05D007197 ORTHO05D009064 1.5e-94 350.1 259 69.9
AUR62034127 Chenopodium quinoa HOM05D007197 ORTHO05D009064 3.4e-91 339.0 259 68.7
Hma1.2p1_0846F.1_g227730 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 2.8e-77 292.7 260 59.2
Dinv32855 Davidia involucrata HOM05D007197 ORTHO05D009064 8.0e-77 291.2 260 59.2
GSVIVG01025047001 Vitis vinifera HOM05D007197 ORTHO05D009064 1.8e-76 290.0 260 58.1
Aqoxy4G03051 Aquilegia oxysepala HOM05D007197 ORTHO05D009064 1.1e-73 280.8 260 57.3
TAR636G0394 Trochodendron aralioides HOM05D007197 ORTHO05D009064 1.9e-73 280.0 260 56.5
TWI79G0955 Tripterygium wilfordii HOM05D007197 ORTHO05D009064 2.4e-73 279.6 260 55.4
Actinidia03776 Actinidia chinensis HOM05D007197 ORTHO05D009064 4.6e-72 275.4 260 59.2
Cfa011437 Carpinus fangiana HOM05D007197 ORTHO05D009064 6.0e-72 275.0 260 55.8
Haze_24019 Corylus avellana HOM05D007197 ORTHO05D009064 6.0e-72 275.0 261 55.6
Nn2g10506 Nelumbo nucifera HOM05D007197 ORTHO05D009064 6.0e-72 275.0 260 55.4
QL01p033595 Quercus lobata HOM05D007197 ORTHO05D009064 6.0e-72 275.0 262 55.0
Rhsim01G0224100 Rhododendron simsii HOM05D007197 ORTHO05D009064 7.8e-72 274.6 260 57.7
Haze_24013 Corylus avellana HOM05D007197 ORTHO05D009064 2.3e-71 273.1 261 55.2
Eucgr.J02088 Eucalyptus grandis HOM05D007197 ORTHO05D009064 2.3e-71 273.1 260 56.2
Oeu017383.1 Olea europaea HOM05D007197 ORTHO05D009064 7.3e-70 268.1 260 56.2
Duzib168G0795 Durio zibethinus HOM05D007197 ORTHO05D009064 9.5e-70 267.7 260 55.0
Lj3g0013433 Lotus japonicus HOM05D007197 ORTHO05D009064 9.5e-70 267.7 261 54.4
Glyma.11G143900 Glycine max HOM05D007197 ORTHO05D009064 1.2e-69 267.3 260 52.7
PSO206G0023 Papaver somniferum HOM05D007197 ORTHO05D009064 1.6e-69 266.9 260 53.1
PSO339G6612 Papaver somniferum HOM05D007197 ORTHO05D009064 8.1e-69 264.6 262 53.1
Prupe.6G066800 Prunus persica HOM05D007197 ORTHO05D009064 8.1e-69 264.6 260 53.8
CiPaw.13G100300 Carya illinoinensis HOM05D007197 ORTHO05D009064 1.1e-68 264.2 260 54.6
CsaV3_6G022120 Cucumis sativus L. HOM05D007197 ORTHO05D009064 1.4e-68 263.8 261 54.8
Prupe.6G086100 Prunus persica HOM05D007197 ORTHO05D009064 1.4e-68 263.8 260 54.2
FAN11G2804 Fragaria x ananassa HOM05D007197 ORTHO05D009064 1.8e-68 263.5 260 55.4
Atru.chr7.1106 Acer truncatum HOM05D007197 ORTHO05D009064 4.0e-68 262.3 260 53.8
MD11G1115100 Malus domestica HOM05D007197 ORTHO05D009064 8.9e-68 261.2 262 55.7
RcHm_v2.0_Chr5g0062661 Rosa chinensis HOM05D007197 ORTHO05D009064 8.9e-68 261.2 260 54.6
MELO3C013672.2 Cucumis melo HOM05D007197 ORTHO05D009064 9.9e-67 257.7 263 55.5
VMungo1127G0131 Vigna mungo HOM05D007197 ORTHO05D009064 1.3e-66 257.3 260 52.7
Thecc.09G328900 Theobroma cacao HOM05D007197 ORTHO05D009064 2.2e-66 256.5 260 52.7
Ca_19199_v3 Cicer arietinum L. HOM05D007197 ORTHO05D009064 3.7e-66 255.8 261 52.5
Migut.N02658 Erythranthe guttata HOM05D007197 ORTHO05D009064 4.9e-66 255.4 258 53.5
Cc01_g12210 Coffea canephora HOM05D007197 ORTHO05D009064 6.4e-66 255.0 260 52.7
Gohir.A05G098300 Gossypium hirsutum HOM05D007197 ORTHO05D009064 1.4e-65 253.8 264 51.9
Phvul.011G067900 Phaseolus vulgaris HOM05D007197 ORTHO05D009064 5.4e-65 251.9 260 52.3
FAN21G2562 Fragaria x ananassa HOM05D007197 ORTHO05D009064 9.2e-65 251.1 281 50.2
SGA_v2.0_scaffold257G45723 Striga asiatica HOM05D007197 ORTHO05D009064 9.2e-65 251.1 260 51.9
AT1G07745 Arabidopsis thaliana HOM05D007197 ORTHO05D009064 1.2e-64 250.8 260 51.2
Lalb_Chr19g0137651 Lupinus albus HOM05D007197 ORTHO05D009064 1.6e-64 250.4 261 52.5
Manes.11G135500 Manihot esculenta HOM05D007197 ORTHO05D009064 1.6e-64 250.4 260 52.3
Sp1g06430 Schrenkiella parvula HOM05D007197 ORTHO05D009064 2.7e-64 249.6 262 51.9
Medtr4g062540 Medicago truncatula HOM05D007197 ORTHO05D009064 6.0e-64 248.4 261 51.0
Carub.0001s0710 Capsella rubella HOM05D007197 ORTHO05D009064 7.8e-64 248.1 262 51.5
CAN.G764.13 Capsicum annuum HOM05D007197 ORTHO05D009064 3.0e-63 246.1 260 50.0
Gorai.009G102000 Gossypium raimondii HOM05D007197 ORTHO05D009064 3.0e-63 246.1 274 50.0
Nitab4.5_0000610g0220 Nicotiana tabacum HOM05D007197 ORTHO05D009064 3.9e-63 245.7 260 49.2
Sopen11g030850 Solanum pennellii HOM05D007197 ORTHO05D009064 5.1e-63 245.4 260 51.2
arahy.Tifrunner.gnm1.ann1.EBM8RS Arachis hypogaea HOM05D007197 ORTHO05D009064 8.6e-63 244.6 261 52.5
CSS0011816 Camellia sinensis var. sinensis HOM05D007197 ORTHO05D009064 8.6e-63 244.6 260 55.0
COL.COLO4_15236 Corchorus olitorius HOM05D007197 ORTHO05D009064 1.9e-62 243.4 269 49.4
TPR.G1052 Trifolium pratense HOM05D007197 ORTHO05D009064 2.5e-62 243.0 261 50.2
Solyc11g073220.3 Solanum lycopersicum HOM05D007197 ORTHO05D009064 3.3e-62 242.7 260 51.2
arahy.Tifrunner.gnm1.ann1.RPJA1V Arachis hypogaea HOM05D007197 ORTHO05D009064 7.3e-62 241.5 261 51.7
Nn2g16045 Nelumbo nucifera HOM05D007197 ORTHO05D009064 1.2e-61 240.7 247 53.0
C08p03340 Brassica napus HOM05D007197 ORTHO05D009064 2.8e-61 239.6 262 50.0
BolC8t47130H Brassica oleracea HOM05D007197 ORTHO05D009064 2.8e-61 239.6 262 50.0
A08p35470 Brassica napus HOM05D007197 ORTHO05D009064 6.2e-61 238.4 262 51.1
BraA08t35453Z Brassica rapa HOM05D007197 ORTHO05D009064 6.2e-61 238.4 262 51.1
ATR0033G040 Amborella trichopoda HOM05D007197 ORTHO05D009064 8.1e-61 238.0 263 50.2
HanXRQChr11g0340311 Helianthus annuus HOM05D007197 ORTHO05D009064 8.1e-61 238.0 260 50.8
Thhalv10008243m.g Eutrema salsugineum HOM05D007197 ORTHO05D009064 2.4e-60 236.5 280 47.9
ECA248G2344 Erigeron canadensis HOM05D007197 ORTHO05D009064 3.1e-60 236.1 261 51.7
THA.LOC104800640 Tarenaya hassleriana HOM05D007197 ORTHO05D009064 3.1e-60 236.1 261 49.8
ClCG02G020670 Citrullus lanatus HOM05D007197 ORTHO05D009064 9.9e-59 231.1 327 44.0
DCAR_018914 Daucus carota HOM05D007197 ORTHO05D009064 1.4e-57 227.3 261 50.6
Gohir.D05G098400 Gossypium hirsutum HOM05D007197 ORTHO05D009064 1.6e-56 223.8 240 51.7
Nn2g16043 Nelumbo nucifera HOM05D007197 ORTHO05D009064 7.8e-56 221.5 222 54.1
CARHR007550 Cardamine hirsuta HOM05D007197 ORTHO05D009064 5.1e-55 218.8 238 50.0
Nitab4.5_0003179g0070 Nicotiana tabacum HOM05D007197 ORTHO05D009064 1.5e-54 217.2 274 44.9
BcaB03g13374 Brassica carinata HOM05D007197 ORTHO05D009064 7.3e-54 214.9 232 51.3
Hma1.2p1_0846F.1_g227720 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 1.4e-52 210.7 219 53.9
FvH4_3g34810 Fragaria vesca HOM05D007197 ORTHO05D009064 5.3e-52 208.8 236 51.7
Sc12g0001730 Simmondsia chinensis HOM05D007197 ORTHO05D009064 9.9e-51 204.5 157 66.9
Peaxi162Scf00406g00019 Petunia axillaris HOM05D007197 ORTHO05D009064 5.1e-47 192.2 257 44.4
Cpa.g.sc252.16 Carica papaya HOM05D007197 ORTHO05D009064 1.5e-46 190.7 164 61.0
Lsat_1_v5_gn_5_166580 Lactuca sativa HOM05D001223 ORTHO05D001058 1.9e-46 190.3 204 52.0
AL1G17970 Arabidopsis lyrata HOM05D007197 ORTHO05D009064 1.4e-44 184.1 200 49.0
Hma1.2p1_0056F.1_g031656 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 2.9e-42 176.4 207 50.2
Psat7g220240 Pisum sativum HOM05D007197 ORTHO05D009064 3.2e-41 172.9 161 57.1
Sed0002926 Sechium edule HOM05D007197 ORTHO05D009064 4.2e-41 172.6 188 52.7
MBI14_g30584_MAGBIO Magnolia biondii HOM05D007197 ORTHO05D009064 1.6e-40 170.6 161 56.5
SHI05980 Sapria himalayana HOM05D000723 ORTHO05D001626 3.7e-37 159.5 209 45.9
Mapoly0014s0028 Marchantia polymorpha HOM05D007197 ORTHO05D009064 1.3e-34 151.0 242 39.7
vmacro14500 Vaccinium macrocarpon HOM05D007197 ORTHO05D009064 7.1e-33 145.2 127 59.8
Os09g0104200 Oryza sativa ssp. japonica HOM05D007197 ORTHO05D009064 3.5e-32 142.9 191 42.9
AagrBONN_evm.TU.Sc2ySwM_228.390 Anthoceros agrestis HOM05D007197 ORTHO05D009064 5.1e-31 139.0 251 37.8
Zm00001eb329200 Zea mays HOM05D007197 ORTHO05D009064 8.7e-31 138.3 196 41.3
HPP92_018064 Vanilla planifolia HOM05D007197 ORTHO05D009064 3.1e-28 129.8 197 38.1
unitig_0.g1024 Utricularia gibba HOM05D007197 ORTHO05D009064 4.5e-27 125.9 212 38.2
Pp3c23_10930 Physcomitrium patens HOM05D007197 ORTHO05D009064 4.2e-25 119.4 166 47.6
Actinidia20464 Actinidia chinensis HOM05D007197 ORTHO05D009064 2.7e-24 116.7 154 46.1
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 3.0e-23 113.2 291 32.0
SMO358G0138 Selaginella moellendorffii HOM05D007197 ORTHO05D009064 2.8e-21 106.7 191 36.6
Glyma.11G143700 Glycine max HOM05D007197 ORTHO05D009064 4.1e-20 102.8 138 45.7
PGSC0003DMG400015539 Solanum tuberosum HOM05D001223 ORTHO05D001058 2.6e-19 100.1 89 52.8
vmacro14499 Vaccinium macrocarpon HOM05D007197 ORTHO05D009064 5.0e-18 95.9 215 39.1
SMO142G0018 Selaginella moellendorffii HOM05D007197 ORTHO05D009064 3.2e-17 93.2 141 39.7
Ah.08g214890 Amaranthus hybridus HOM05D007197 ORTHO05D009064 1.0e-15 88.2 56 73.2
Ah.08g214900 Amaranthus hybridus HOM05D007197 ORTHO05D009064 6.7e-15 85.5 49 83.7
MCO16G347 Micromonas commoda HOM05D007197 ORTHO05D009064 1.5e-14 84.3 215 33.0
Eucgr.K01871 Eucalyptus grandis HOM05D007197 ORTHO05D009064 2.4e-12 77.0 70 54.3
HPP92_017953 Vanilla planifolia HOM05D007197 ORTHO05D009064 5.0e-10 69.3 75 42.7
EL10Ac9g22649 Beta vulgaris HOM05D001363 ORTHO05D006255 1.6e-08 64.3 169 28.4
Cre03.g184651 Chlamydomonas reinhardtii HOM05D007197 ORTHO05D009064 2.1e-08 63.9 181 31.5
PRCOL_00004125 Prasinoderma coloniale HOM05D007197 ORTHO05D009064 1.0e-07 61.6 192 28.6
TPR.G6878 Trifolium pratense HOM05D000917 ORTHO05D000764 1.0e-07 61.6 59 50.8
MCO10G289 Micromonas commoda HOM05D007288 ORTHO05D009200 1.5e-06 57.8 167 30.5
SEGI_11095 Sequoiadendron giganteum HOM05D007197 ORTHO05D009064 5.7e-06 55.8 60 46.7


User provided reference genes

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