Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18941 Selenicereus undatus HOM05D007195 ORTHO05D008939 4.9e-134 481.1 238 100.0
COL.COLO4_18444 Corchorus olitorius HOM05D007195 ORTHO05D008939 5.1e-22 109.0 63 77.8
Eucgr.B02402 Eucalyptus grandis HOM05D007195 ORTHO05D008939 5.1e-22 109.0 72 70.8
Thecc.09G327900 Theobroma cacao HOM05D007195 ORTHO05D008939 1.5e-21 107.5 82 62.2
AUR62001839 Chenopodium quinoa HOM05D007195 ORTHO05D008939 1.9e-21 107.1 64 79.7
Glyma.11G143000 Glycine max HOM05D007195 ORTHO05D008939 4.3e-21 105.9 90 58.9
Dinv32847 Davidia involucrata HOM05D007195 ORTHO05D008939 5.6e-21 105.5 72 69.4
QL01p033425 Quercus lobata HOM05D007195 ORTHO05D008939 5.6e-21 105.5 64 73.4
VMungo1127G1709 Vigna mungo HOM05D007195 ORTHO05D008939 5.6e-21 105.5 95 55.8
Cc01_g12270 Coffea canephora HOM05D007195 ORTHO05D008939 9.6e-21 104.8 76 65.8
Lalb_Chr01g0003811 Lupinus albus HOM05D007195 ORTHO05D008939 1.3e-20 104.4 73 67.1
Sabra16G0141600 Salix brachista HOM05D007195 ORTHO05D008939 1.3e-20 104.4 64 75.0
Gorai.003G136500 Gossypium raimondii HOM05D007195 ORTHO05D008939 1.6e-20 104.0 103 54.4
Oeu040291.1 Olea europaea HOM05D007195 ORTHO05D008939 1.6e-20 104.0 64 73.4
CANSAT54G2014 Cannabis sativa HOM05D007195 ORTHO05D008939 2.1e-20 103.6 64 70.3
Phvul.011G067100 Phaseolus vulgaris HOM05D007195 ORTHO05D008939 2.1e-20 103.6 73 67.1
arahy.Tifrunner.gnm1.ann1.R57C1H Arachis hypogaea HOM05D000640 ORTHO05D008939 3.6e-20 102.8 73 67.1
Migut.D02132 Erythranthe guttata HOM05D007195 ORTHO05D008939 3.6e-20 102.8 64 73.4
Gohir.D03G129800 Gossypium hirsutum HOM05D007195 ORTHO05D008939 3.6e-20 102.8 82 58.5
Potri.001G235400 Populus trichocarpa HOM05D007195 ORTHO05D008939 3.6e-20 102.8 64 71.9
TWI79G0669 Tripterygium wilfordii HOM05D007195 ORTHO05D008939 3.6e-20 102.8 64 75.0
CSS0047106 Camellia sinensis var. sinensis HOM05D007195 ORTHO05D008939 4.8e-20 102.4 64 67.2
TPR.G2998 Trifolium pratense HOM05D007195 ORTHO05D008939 4.8e-20 102.4 93 57.0
GSVIVG01025036001 Vitis vinifera HOM05D007195 ORTHO05D008939 4.8e-20 102.4 64 70.3
Lj3g0003411 Lotus japonicus HOM05D007195 ORTHO05D008939 6.2e-20 102.1 75 65.3
PSO339G1320 Papaver somniferum HOM05D007195 ORTHO05D008939 6.2e-20 102.1 63 69.8
Lalb_Chr19g0137671 Lupinus albus HOM05D007195 ORTHO05D008939 8.1e-20 101.7 73 65.8
Actinidia37244 Actinidia chinensis HOM05D007195 ORTHO05D008939 1.1e-19 101.3 64 71.9
Hma1.2p1_0846F.1_g227620 Hydrangea macrophylla HOM05D007195 ORTHO05D008939 1.1e-19 101.3 64 68.8
MSTRG.18595 Avicennia marina HOM05D007195 ORTHO05D008939 1.4e-19 100.9 64 70.3
CSS0014951 Camellia sinensis var. sinensis HOM05D007195 ORTHO05D008939 1.4e-19 100.9 64 67.2
Gohir.A03G038600 Gossypium hirsutum HOM05D007195 ORTHO05D008939 1.4e-19 100.9 84 60.7
Rhsim13G0087100 Rhododendron simsii HOM05D007195 ORTHO05D008939 1.4e-19 100.9 64 68.8
unitig_899.g14897 Utricularia gibba HOM05D007195 ORTHO05D008939 1.4e-19 100.9 88 55.7
HanXRQChr06g0175991 Helianthus annuus HOM05D007195 ORTHO05D008939 1.8e-19 100.5 64 71.9
Sc12g0001700 Simmondsia chinensis HOM05D007195 ORTHO05D008939 1.8e-19 100.5 64 75.0
Nitab4.5_0000610g0300 Nicotiana tabacum HOM05D007195 ORTHO05D008939 4.0e-19 99.4 64 68.8
Solyc11g073130.2 Solanum lycopersicum HOM05D007195 ORTHO05D008939 4.0e-19 99.4 64 70.3
Sopen11g030780 Solanum pennellii HOM05D007195 ORTHO05D008939 4.0e-19 99.4 64 70.3
Hma1.2p1_0846F.1_g227610 Hydrangea macrophylla HOM05D007195 ORTHO05D008939 5.3e-19 99.0 173 36.4
PSO384G1952 Papaver somniferum HOM05D007195 ORTHO05D008939 5.3e-19 99.0 63 66.7
vmacro03115 Vaccinium macrocarpon HOM05D007195 ORTHO05D008939 5.3e-19 99.0 63 69.8
Nn2g10480 Nelumbo nucifera HOM05D007195 ORTHO05D008939 6.9e-19 98.6 91 56.0
Nitab4.5_0003179g0020 Nicotiana tabacum HOM05D007195 ORTHO05D008939 9.0e-19 98.2 64 68.8
PGSC0003DMG401015537 Solanum tuberosum HOM05D007195 ORTHO05D008939 1.5e-18 97.4 64 68.8
Aqoxy4G03018 Aquilegia oxysepala HOM05D007195 ORTHO05D008939 2.0e-18 97.1 63 65.1
Cpa.g.sc190.38 Carica papaya HOM05D007195 ORTHO05D008939 2.0e-18 97.1 64 65.6
Medtr4g060990 Medicago truncatula HOM05D007195 ORTHO05D008939 2.0e-18 97.1 90 55.6
ATR0033G009 Amborella trichopoda HOM05D007195 ORTHO05D008939 2.6e-18 96.7 75 62.7
ClCG02G020450 Citrullus lanatus HOM05D007195 ORTHO05D008939 2.6e-18 96.7 63 60.3
CsaV3_6G022170 Cucumis sativus L. HOM05D007195 ORTHO05D008939 2.6e-18 96.7 67 61.2
Psat7g222600 Pisum sativum HOM05D007195 ORTHO05D008939 2.6e-18 96.7 63 68.3
ECA236G1878 Erigeron canadensis HOM05D007195 ORTHO05D000180 3.4e-18 96.3 67 61.2
Lsat_1_v5_gn_8_78640 Lactuca sativa HOM05D007195 ORTHO05D008939 3.4e-18 96.3 64 64.1
Cfa011446 Carpinus fangiana HOM05D007195 ORTHO05D008939 5.8e-18 95.5 64 65.6
Haze_24028 Corylus avellana HOM05D007195 ORTHO05D008939 5.8e-18 95.5 64 65.6
Psat6g139760 Pisum sativum HOM05D007195 ORTHO05D008939 7.6e-18 95.1 73 61.6
CiPaw.14G072400 Carya illinoinensis HOM05D007195 ORTHO05D008939 9.9e-18 94.7 71 62.0
CAN.G420.9 Capsicum annuum HOM05D007195 ORTHO05D008939 1.7e-17 94.0 64 67.2
MD03G1100000 Malus domestica HOM05D007195 ORTHO05D008939 2.9e-17 93.2 90 53.3
Sed0026895 Sechium edule HOM05D007195 ORTHO05D008939 4.9e-17 92.4 63 58.7
Prupe.6G085100 Prunus persica HOM05D007195 ORTHO05D008939 2.4e-16 90.1 88 51.1
Ca_19192_v3 Cicer arietinum L. HOM05D007195 ORTHO05D008939 1.2e-15 87.8 73 56.2
Manes.11G134400 Manihot esculenta HOM05D007195 ORTHO05D008939 2.1e-15 87.0 75 60.0
A02p06880 Brassica napus HOM05D007195 ORTHO05D008939 7.9e-15 85.1 64 59.4
AT5G59770 Arabidopsis thaliana HOM05D007195 ORTHO05D008939 1.0e-14 84.7 74 56.8
BolC2t07319H Brassica oleracea HOM05D007195 ORTHO05D008939 1.3e-14 84.3 61 62.3
BraA02t05767Z Brassica rapa HOM05D007195 ORTHO05D008939 1.3e-14 84.3 61 62.3
CDE11G0069 Ceratophyllum demersum HOM05D007195 ORTHO05D008939 1.3e-14 84.3 63 60.3
Pp3c12_26220 Physcomitrium patens HOM05D007195 ORTHO05D008939 1.3e-14 84.3 63 60.3
Atru.chr3.3816 Acer truncatum HOM05D007195 ORTHO05D008939 1.8e-14 84.0 50 76.0
Aa31sc23G190 Aethionema arabicum HOM05D007195 ORTHO05D008939 2.3e-14 83.6 74 51.4
C02p12160 Brassica napus HOM05D007195 ORTHO05D008939 5.1e-14 82.4 61 60.7
DCAR_018881 Daucus carota HOM05D007195 ORTHO05D008939 5.1e-14 82.4 64 56.2
MBI05_g35606_MAGBIO Magnolia biondii HOM05D007195 ORTHO05D008939 5.1e-14 82.4 49 79.6
RcHm_v2.0_Chr5g0062801 Rosa chinensis HOM05D007195 ORTHO05D008939 5.1e-14 82.4 78 48.7
AL8G36290 Arabidopsis lyrata HOM05D007195 ORTHO05D008939 8.7e-14 81.6 74 54.1
Carub.0008s2043 Capsella rubella HOM05D007195 ORTHO05D008939 8.7e-14 81.6 74 52.7
Zm00001eb351400 Zea mays HOM05D007195 ORTHO05D008939 8.7e-14 81.6 63 52.4
Thhalv10027965m.g Eutrema salsugineum HOM05D007195 ORTHO05D008939 1.1e-13 81.3 63 58.7
Sp6g21440 Schrenkiella parvula HOM05D007195 ORTHO05D008939 1.5e-13 80.9 72 54.2
arahy.Tifrunner.gnm1.ann1.73EBMB Arachis hypogaea HOM05D007195 ORTHO05D008939 1.9e-13 80.5 58 63.8
BcaB05g22577 Brassica carinata HOM05D007195 ORTHO05D008939 1.9e-13 80.5 61 59.0
Thhalv10014612m.g Eutrema salsugineum HOM05D007195 ORTHO05D008939 1.9e-13 80.5 61 57.4
Os05g0460800 Oryza sativa ssp. japonica HOM05D007195 ORTHO05D008939 2.5e-13 80.1 64 54.7
FAN21G0153 Fragaria x ananassa HOM05D007195 ORTHO05D008939 3.3e-13 79.7 78 47.4
FAN16G0269 Fragaria x ananassa HOM05D007195 ORTHO05D008939 4.3e-13 79.3 78 48.7
AUR62009627 Chenopodium quinoa HOM05D007195 ORTHO05D008939 5.6e-13 79.0 48 75.0
Mapoly0010s0013 Marchantia polymorpha HOM05D007195 ORTHO05D008939 7.4e-13 78.6 63 55.6
Ciclev10029246m.g Citrus clementina HOM05D007195 ORTHO05D008939 1.3e-12 77.8 64 53.1
CARHR273350 Cardamine hirsuta HOM05D007195 ORTHO05D008939 1.6e-12 77.4 61 55.7
FvH4_3g34950 Fragaria vesca HOM05D007195 ORTHO05D008939 1.6e-12 77.4 78 46.2
FAN11G1442 Fragaria x ananassa HOM05D007195 ORTHO05D008939 1.6e-12 77.4 78 46.2
THA.LOC104810801 Tarenaya hassleriana HOM05D007195 ORTHO05D008939 1.6e-12 77.4 74 47.3
FAN25G0594 Fragaria x ananassa HOM05D007195 ORTHO05D008939 1.4e-11 74.3 78 43.6
EL10Ac7g15961 Beta vulgaris HOM05D007195 ORTHO05D008939 4.5e-10 69.3 172 29.7
AagrBONN_evm.TU.Sc2ySwM_344.4841 Anthoceros agrestis HOM05D007195 ORTHO05D008939 1.0e-09 68.2 89 39.3
MBI05_g38489_MAGBIO Magnolia biondii HOM05D007195 ORTHO05D008939 2.9e-09 66.6 38 78.9
arahy.Tifrunner.gnm1.ann1.7SC5JI Arachis hypogaea HOM05D007195 ORTHO05D008939 8.4e-09 65.1 48 62.5
MELO3C013676.2 Cucumis melo HOM05D007195 ORTHO05D008939 4.6e-07 59.3 42 52.4
SEGI_05585 Sequoiadendron giganteum HOM05D007195 ORTHO05D008939 1.0e-06 58.2 45 62.2


User provided reference genes

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