Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 4.9e-177 624.4 321 100.0
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 2.2e-153 545.8 314 88.2
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 9.2e-152 540.4 317 85.5
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 6.8e-147 524.2 317 82.6
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 5.8e-146 521.2 315 82.9
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 7.6e-146 520.8 315 82.5
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 4.2e-144 515.0 312 82.4
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 9.0e-139 497.3 311 80.1
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 1.9e-136 489.6 314 78.0
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 1.2e-135 486.9 311 77.5
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 2.1e-135 486.1 315 78.7
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 6.6e-134 481.1 313 77.3
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 1.1e-133 480.3 311 76.5
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 2.5e-133 479.2 313 76.7
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 9.6e-133 477.2 317 76.7
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.3e-132 476.9 313 76.7
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.6e-132 476.5 313 76.0
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 2.1e-132 476.1 315 75.6
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 2.8e-132 475.7 313 77.3
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 3.6e-132 475.3 311 76.5
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 4.8e-132 474.9 313 77.0
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 4.8e-132 474.9 313 76.4
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 4.8e-132 474.9 315 75.6
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 6.2e-132 474.6 316 77.8
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 1.1e-131 473.8 313 78.0
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 4.0e-131 471.9 311 75.6
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 6.9e-131 471.1 315 75.6
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.2e-130 470.3 315 74.6
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 2.0e-130 469.5 311 76.5
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 2.0e-130 469.5 315 75.6
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 3.4e-130 468.8 315 74.3
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 9.9e-130 467.2 315 74.6
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.7e-129 466.5 315 73.3
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 2.9e-129 465.7 315 74.6
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 4.9e-129 464.9 311 75.6
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 6.4e-129 464.5 317 74.8
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.4e-128 463.4 305 75.4
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 1.9e-128 463.0 301 77.4
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 2.4e-128 462.6 317 74.8
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 2.4e-128 462.6 315 74.0
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 2.4e-128 462.6 315 74.3
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 3.2e-128 462.2 311 74.3
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 4.2e-128 461.8 311 75.2
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 7.1e-128 461.1 315 72.4
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 7.1e-128 461.1 315 74.6
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 9.3e-128 460.7 315 72.1
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 1.2e-127 460.3 344 70.1
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 1.2e-127 460.3 315 72.1
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 1.2e-127 460.3 315 74.3
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 1.6e-127 459.9 311 74.9
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 2.7e-127 459.1 311 74.3
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 3.5e-127 458.8 298 76.2
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 4.6e-127 458.4 309 75.1
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 6.0e-127 458.0 311 74.6
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 1.8e-126 456.4 315 71.7
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 5.1e-126 454.9 311 74.3
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 1.5e-125 453.4 312 73.7
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 1.5e-125 453.4 315 72.1
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 4.3e-125 451.8 312 72.4
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 7.4e-125 451.1 314 72.6
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 2.1e-124 449.5 311 71.4
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 3.7e-124 448.7 293 76.1
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 8.1e-124 447.6 314 71.0
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 1.1e-123 447.2 315 71.1
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 6.9e-123 444.5 311 73.0
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 2.0e-122 443.0 311 71.1
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 2.0e-122 443.0 292 73.6
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 2.6e-122 442.6 293 75.1
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 4.5e-122 441.8 312 70.5
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 4.5e-122 441.8 312 70.5
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 4.5e-122 441.8 311 70.1
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 4.5e-122 441.8 319 69.6
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 5.8e-122 441.4 311 70.7
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 5.8e-122 441.4 338 68.6
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 7.6e-122 441.0 300 71.7
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 7.6e-122 441.0 315 69.2
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 1.3e-121 440.3 312 70.2
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 1.3e-121 440.3 312 70.2
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 1.3e-121 440.3 312 72.4
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 2.9e-121 439.1 312 69.9
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 2.9e-121 439.1 312 69.9
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 3.8e-121 438.7 311 70.4
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 4.9e-121 438.3 306 70.9
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 1.9e-120 436.4 315 70.8
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 2.5e-120 436.0 298 71.5
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 2.5e-120 436.0 304 74.0
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 4.2e-120 435.3 312 68.9
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 5.5e-120 434.9 298 71.1
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 7.1e-120 434.5 298 70.8
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 7.1e-120 434.5 298 70.8
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 2.7e-119 432.6 311 68.8
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 4.6e-119 431.8 327 67.6
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 4.6e-119 431.8 327 67.6
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 4.6e-119 431.8 327 67.6
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 6.0e-119 431.4 323 68.1
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 7.9e-119 431.0 286 75.9
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 7.9e-119 431.0 312 69.9
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 3.0e-118 429.1 311 69.8
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 3.0e-118 429.1 312 69.9
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 3.9e-118 428.7 312 68.3
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 3.9e-118 428.7 313 67.7
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 5.1e-118 428.3 307 68.7
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 6.7e-118 427.9 327 66.7
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 6.7e-118 427.9 289 74.4
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 1.9e-117 426.4 311 67.8
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 3.3e-117 425.6 307 69.1
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 3.3e-117 425.6 307 68.4
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 1.3e-116 423.7 313 70.6
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.6e-116 423.3 337 65.6
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 4.0e-115 418.7 310 69.4
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 1.2e-114 417.2 253 81.0
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 5.8e-114 414.8 298 69.5
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 1.3e-113 413.7 298 69.5
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.1e-112 410.6 290 68.3
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 4.2e-112 408.7 341 62.5
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 9.3e-112 407.5 272 74.6
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 4.3e-109 398.7 325 64.9
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 8.5e-105 384.4 253 73.1
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 2.7e-95 352.8 310 61.3
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 3.6e-95 352.4 316 60.1
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 5.1e-94 348.6 318 55.7
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.7e-89 333.6 224 74.6
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 1.9e-88 330.1 298 55.7
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 8.0e-87 324.7 300 56.0
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.8e-86 323.6 235 71.1
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 5.2e-86 322.0 224 73.7
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 4.4e-85 318.9 305 53.1
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 1.6e-82 310.5 275 61.1
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 4.2e-80 302.4 307 50.2
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 1.3e-73 280.8 275 54.5
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 3.8e-73 279.3 293 50.5
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 2.8e-63 246.5 213 61.5
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 1.5e-61 240.7 293 46.1
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 8.6e-49 198.4 296 40.5
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 5.2e-46 189.1 189 57.1
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 5.1e-33 146.0 104 73.1
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 8.1e-31 138.7 93 74.2
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 2.9e-28 130.2 90 74.4
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 1.4e-27 127.9 94 64.9
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 4.0e-22 109.8 79 67.1
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 6.9e-22 109.0 113 56.6
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 6.6e-17 92.4 90 55.6
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 6.6e-17 92.4 90 55.6
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 2.6e-13 80.5 90 48.9
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 3.4e-13 80.1 95 53.7


User provided reference genes

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