Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 2.5e-95 352.1 170 100.0
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 7.3e-55 217.6 150 66.0
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 7.5e-52 207.6 149 65.1
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 9.8e-52 207.2 150 64.0
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 3.2e-50 202.2 149 62.4
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.6e-49 199.9 165 57.6
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 3.5e-49 198.7 150 62.0
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 5.9e-49 198.0 151 57.6
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 5.9e-49 198.0 148 64.2
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 2.3e-48 196.1 151 63.6
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.5e-47 193.4 152 57.9
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.9e-47 193.0 151 58.9
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 5.6e-47 191.4 148 61.5
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.6e-46 188.7 154 57.8
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 3.6e-46 188.7 151 58.9
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 6.2e-46 188.0 154 58.4
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 1.4e-45 186.8 151 55.0
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.8e-45 186.4 151 60.3
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.8e-45 186.4 150 60.0
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.3e-45 186.0 150 61.3
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 2.3e-45 186.0 149 58.4
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 2.3e-45 186.0 148 58.8
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 2.3e-45 186.0 151 57.6
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 2.3e-45 186.0 154 57.8
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.1e-45 185.7 150 56.0
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 3.1e-45 185.7 148 62.2
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.0e-45 185.3 152 57.9
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 4.0e-45 185.3 148 56.8
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 6.8e-45 184.5 148 58.1
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 8.9e-45 184.1 148 59.5
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 5.8e-44 181.4 151 55.6
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 7.5e-44 181.0 170 52.9
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.3e-43 180.3 154 58.4
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.7e-43 179.9 154 57.8
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 2.2e-43 179.5 150 58.7
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.2e-43 179.5 154 55.2
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 3.2e-42 175.6 148 56.8
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 4.1e-42 175.3 167 51.5
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 5.4e-42 174.9 151 57.0
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 5.4e-42 174.9 158 54.4
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 9.2e-42 174.1 149 56.4
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.2e-41 173.7 151 56.3
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 2.7e-41 172.6 154 55.2
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 3.5e-41 172.2 147 53.1
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.5e-41 172.2 154 54.5
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 7.8e-41 171.0 151 54.3
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 3.0e-40 169.1 154 53.2
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 3.9e-40 168.7 135 59.3
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 3.9e-40 168.7 170 48.8
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 5.0e-40 168.3 148 52.7
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 6.6e-40 167.9 151 53.0
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 8.6e-40 167.5 148 52.0
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 8.6e-40 167.5 148 52.7
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 8.6e-40 167.5 153 52.9
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 8.6e-40 167.5 149 52.3
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 1.1e-39 167.2 170 47.6
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.9e-39 166.4 167 49.1
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.9e-39 166.4 148 52.7
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 1.9e-39 166.4 148 52.7
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.9e-39 166.4 151 52.3
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 3.3e-39 165.6 148 52.0
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 7.3e-39 164.5 147 50.3
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 7.3e-39 164.5 161 49.7
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 1.2e-38 163.7 149 52.3
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 1.2e-38 163.7 149 53.0
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.6e-38 163.3 148 50.0
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 4.7e-38 161.8 143 54.5
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 8.1e-38 161.0 153 52.3
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 1.8e-37 159.8 152 51.3
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 3.1e-37 159.1 168 46.4
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 5.2e-37 158.3 147 50.3
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 2.0e-36 156.4 153 49.0
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 2.6e-36 156.0 149 50.3
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 3.4e-36 155.6 153 48.4
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.4e-36 155.2 135 56.3
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 4.4e-36 155.2 155 48.4
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 5.8e-36 154.8 151 52.3
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 9.8e-36 154.1 148 53.4
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 9.8e-36 154.1 149 51.7
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 1.3e-35 153.7 153 49.0
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 1.3e-35 153.7 154 49.4
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 6.4e-35 151.4 147 49.0
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 8.3e-35 151.0 175 48.0
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 8.3e-35 151.0 149 49.7
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 1.1e-34 150.6 150 50.0
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 1.1e-34 150.6 150 50.0
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 3.2e-34 149.1 140 49.3
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 5.4e-34 148.3 147 48.3
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 2.1e-33 146.4 133 51.9
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 6.0e-33 144.8 207 38.6
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 6.6e-32 141.4 125 56.8
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.5e-28 130.2 158 44.9
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.6e-28 129.4 158 43.0
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 3.4e-28 129.0 158 44.3
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.9e-28 127.5 155 44.5
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 8.4e-27 124.4 153 43.1
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.4e-27 124.4 153 43.1
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.9e-26 123.2 129 45.7
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-24 117.1 156 42.3
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 3.0e-24 115.9 159 39.6
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 8.6e-24 114.4 102 52.9
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.9e-23 113.2 118 48.3
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 3.6e-22 109.0 151 40.4
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 9.9e-20 100.9 97 53.6
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.8e-19 99.0 135 43.0
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 9.0e-13 77.8 170 27.6
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 1.9e-10 70.1 146 26.7
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 1.5e-07 60.5 89 40.4
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.9e-07 60.1 54 48.1
EL10Ac1g02364 Beta vulgaris HOM05D003723 ORTHO05D004306 2.5e-07 59.7 130 27.7
Ah.05g167030 Amaranthus hybridus HOM05D003723 ORTHO05D004306 7.4e-07 58.2 121 28.1


User provided reference genes

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